We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
912 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 19 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
TTC21B
ENSSSCG00000015908
ENSG00000123607
Tetratricopeptide repeat domain 21B
Low tissue specificity
Detected in all
TTC7A
ENSSSCG00000008434
ENSG00000068724
Tetratricopeptide repeat domain 7A
Tissue enhanced
Detected in many
lymphoid tissue:
45.9
stomach:
47.9
TUBA1B
ENSSSCG00000000190
ENSG00000167552
Tubulin alpha-1B chain Detyrosinated tubulin alpha-1B chain
Tissue enhanced
Detected in all
brain:
214.6
lens:
298.3
TUBA8
ENSSSCG00000000773
ENSG00000183785
Tubulin alpha 8
Tissue enhanced
Detected in all
skeletal muscle:
43.0
testis:
37.4
TUBB
ENSSSCG00000001379
ENSG00000196230
Tubulin beta chain
Tissue enhanced
Detected in all
lens:
164.9
TUBB2B
ENSSSCG00000033655
ENSG00000137285
Tubulin beta-2B chain
Tissue enhanced
Detected in many
brain:
54.1
lens:
23.5
TUBB3
ENSSSCG00000002639
ENSG00000258947
Tubulin beta 3 class III
Tissue enriched
Detected in some
brain:
69.0
TUBGCP4
ENSSSCG00000004708
ENSG00000137822
Tubulin gamma complex associated protein 4
Low tissue specificity
Detected in all
TUBGCP6
ENSSSCG00000000972
ENSG00000128159
Tubulin gamma complex associated protein 6
Low tissue specificity
Detected in all
TWIST1
ENSSSCG00000015370
ENSG00000122691
Twist family bHLH transcription factor 1
Tissue enhanced
Detected in many
adipose tissue:
31.3
dura mater:
47.7
TWIST2
ENSSSCG00000016343
ENSG00000233608
Twist family bHLH transcription factor 2
Tissue enhanced
Detected in many
skin:
55.5
TWNK
ENSSSCG00000030428
ENSG00000107815
Twinkle mtDNA helicase
Low tissue specificity
Detected in all
TXNL4A
ENSSSCG00000005777
ENSG00000141759
Thioredoxin like 4A
Tissue enhanced
Detected in all
lens:
44.2
UBR1
ENSSSCG00000004717
ENSG00000159459
Ubiquitin protein ligase E3 component n-recognin 1
Low tissue specificity
Detected in all
UFSP2
ENSSSCG00000015793
ENSG00000109775
UFM1 specific peptidase 2
Low tissue specificity
Detected in all
UMOD
ENSSSCG00000007859
ENSG00000169344
Uromodulin
Tissue enriched
Detected in single
kidney:
213.0
UNC80
ENSSSCG00000016153
ENSG00000144406
Unc-80 homolog, NALCN channel complex subunit
Tissue enhanced
Detected in some
brain:
32.7
pineal gland:
16.0
pituitary gland:
22.1
VANGL1
ENSSSCG00000006746
ENSG00000173218
VANGL planar cell polarity protein 1
Low tissue specificity
Detected in all
VAX1
ENSSSCG00000010666
ENSG00000148704
Ventral anterior homeobox 1
Tissue enhanced
Detected in some
brain:
9.2
male glands:
7.8
pituitary gland:
8.6
VEGFC
ENSSSCG00000015770
ENSG00000150630
Vascular endothelial growth factor C
Tissue enhanced
Detected in many
thyroid gland:
33.4
VIPAS39
ENSSSCG00000002403
ENSG00000151445
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog
Low tissue specificity
Detected in all
VPS13B
ENSSSCG00000006071
ENSG00000132549
Vacuolar protein sorting 13 homolog B
Low tissue specificity
Detected in all
VSX2
ENSSSCG00000002363
ENSG00000119614
Visual system homeobox 2
Tissue enriched
Detected in some
retina:
47.2
WASHC5
ENSSSCG00000005969
ENSG00000164961
WASH complex subunit 5
Low tissue specificity
Detected in all
WDFY3
ENSSSCG00000009230
ENSG00000163625
WD repeat and FYVE domain containing 3
Low tissue specificity
Detected in all
WDR19
ENSSSCG00000008789
ENSG00000157796
WD repeat domain 19
Low tissue specificity
Detected in all
WDR26
ENSSSCG00000010849
ENSG00000162923
WD repeat domain 26
Low tissue specificity
Detected in all
WDR34
ENSSSCG00000005655
ENSG00000119333
WD repeat domain 34
Low tissue specificity
Detected in all
WDR35
ENSSSCG00000008604
ENSG00000118965
WD repeat domain 35
Tissue enhanced
Detected in all
adrenal gland:
59.0
WDR4
ENSSSCG00000023078
ENSG00000160193
WD repeat domain 4
Low tissue specificity
Detected in all
WDR60
ENSSSCG00000038486
ENSG00000126870
WD repeat domain 60
Low tissue specificity
Detected in all
WDR62
ENSSSCG00000002923
ENSG00000075702
WD repeat-containing protein 62
Tissue enriched
Detected in all
testis:
55.3
WDR73
ENSSSCG00000022451
ENSG00000177082
WD repeat domain 73
Low tissue specificity
Detected in all
WISP3
ENSSSCG00000004422
ENSG00000112761
WNT1 inducible signaling pathway protein 3
Group enriched
Detected in all
cartilage:
57.5
male glands:
22.0
WNT1
ENSSSCG00000000183
ENSG00000125084
Wnt family member 1
Tissue enriched
Detected in some
ovary:
27.0
WNT10A
ENSSSCG00000026958
ENSG00000135925
Wnt family member 10A
Tissue enhanced
Detected in many
cornea:
23.5
mesothelial tissue:
17.2
mouth:
10.7
vagus nerve:
12.5
WNT10B
ENSSSCG00000000182
ENSG00000169884
Protein Wnt-10b precursor
Low tissue specificity
Detected in all
WNT3
ENSSSCG00000017317
ENSG00000108379
Wnt family member 3
Group enriched
Detected in some
cornea:
38.0
skin:
26.4
testis:
17.9
WNT5A
ENSSSCG00000035859
ENSG00000114251
Wnt family member 5A
Tissue enhanced
Detected in many
cornea:
43.9
urinary bladder:
38.3
WNT7A
ENSSSCG00000039010
ENSG00000154764
Wnt family member 7A
Tissue enriched
Detected in some
lens:
157.5
WRN
ENSSSCG00000015840
ENSG00000165392
Werner syndrome RecQ like helicase
Low tissue specificity
Detected in all
XPA
ENSSSCG00000005368
ENSG00000136936
XPA, DNA damage recognition and repair factor
Low tissue specificity
Detected in all
XPC
ENSSSCG00000011602
ENSG00000154767
XPC complex subunit, DNA damage recognition and repair factor
Low tissue specificity
Detected in all
XYLT1
ENSSSCG00000007872
ENSG00000103489
Xylosyltransferase 1
Tissue enriched
Detected in many
cartilage:
92.2
XYLT2
ENSSSCG00000017573
ENSG00000015532
Xylosyltransferase 2
Low tissue specificity
Detected in all
YAP1
ENSSSCG00000031429
ENSG00000137693
Yes associated protein 1
Low tissue specificity
Detected in all
YWHAE
ENSSSCG00000038989
ENSG00000108953
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon
Low tissue specificity
Detected in all
ZBTB16
ENSSSCG00000030095
ENSG00000109906
Zinc finger and BTB domain containing 16
Tissue enhanced
Detected in many
skeletal muscle:
73.1
ZBTB20
ENSSSCG00000026113
ENSG00000181722
Zinc finger and BTB domain containing 20
Low tissue specificity
Detected in all
ZBTB42
ENSSSCG00000033283
ENSG00000179627
Zinc finger and BTB domain containing 42
Tissue enhanced
Detected in many
male glands:
32.7
stomach:
18.8
« prev
| Page
of 19 |
next »