We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
912 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 19 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
POMP
ENSSSCG00000037170
ENSG00000132963
Proteasome maturation protein
Tissue enhanced
Detected in all
lens:
78.2
POMT1
ENSSSCG00000005716
ENSG00000130714
Protein O-mannosyltransferase 1
Tissue enhanced
Detected in all
testis:
58.6
POMT2
ENSSSCG00000002397
ENSG00000009830
Protein O-mannosyltransferase 2
Low tissue specificity
Detected in all
POR
ENSSSCG00000038320
ENSG00000127948
NADPH--cytochrome P450 reductase
Low tissue specificity
Detected in all
PORCN
ENSSSCG00000024793
ENSG00000102312
Porcupine O-acyltransferase
Low tissue specificity
Detected in all
PPIB
ENSSSCG00000034137
ENSG00000166794
Peptidylprolyl isomerase B
Low tissue specificity
Detected in all
PPP1CB
ENSSSCG00000008540
ENSG00000213639
Serine/threonine-protein phosphatase PP1-beta catalytic subunit
Low tissue specificity
Detected in all
PPP1R15B
ENSSSCG00000015282
ENSG00000158615
Protein phosphatase 1 regulatory subunit 15B
Low tissue specificity
Detected in all
PQBP1
ENSSSCG00000025264
ENSG00000102103
Polyglutamine-binding protein 1
Low tissue specificity
Detected in all
PRDM5
ENSSSCG00000009101
ENSG00000138738
PR/SET domain 5
Low tissue specificity
Detected in all
PRDM6
ENSSSCG00000014238
ENSG00000061455
PR/SET domain 6
Tissue enhanced
Detected in many
cervix:
23.2
smooth muscle:
34.7
urinary bladder:
29.3
PRKAR1A
ENSSSCG00000017259
ENSG00000108946
CAMP-dependent protein kinase type I-alpha regulatory subunit
Low tissue specificity
Detected in all
PRKCSH
ENSSSCG00000013627
ENSG00000130175
Glucosidase 2 subunit beta precursor
Low tissue specificity
Detected in all
PRRX1
ENSSSCG00000031503
ENSG00000116132
Paired related homeobox 1
Tissue enhanced
Detected in many
cervix:
63.8
dura mater:
70.7
PRSS56
ENSSSCG00000016286
ENSG00000237412
Serine protease 56
Tissue enriched
Detected in some
brain:
25.4
PTCH1
ENSSSCG00000027312
ENSG00000185920
Patched 1
Tissue enhanced
Detected in all
cartilage:
55.5
vagus nerve:
69.7
PTDSS1
ENSSSCG00000006089
ENSG00000156471
Phosphatidylserine synthase 1
Tissue enriched
Detected in all
heart:
138.5
PTH1R
ENSSSCG00000011326
ENSG00000160801
Parathyroid hormone/parathyroid hormone-related peptide receptor
Tissue enhanced
Detected in many
cartilage:
47.4
kidney:
49.9
PTHLH
ENSSSCG00000036893
ENSG00000087494
Parathyroid hormone-related protein precursor
Tissue enhanced
Detected in all
male glands:
30.5
PTPN11
ENSSSCG00000030289
ENSG00000179295
Protein tyrosine phosphatase, non-receptor type 11
Low tissue specificity
Detected in all
PTPN14
ENSSSCG00000015582
ENSG00000152104
Protein tyrosine phosphatase, non-receptor type 14
Low tissue specificity
Detected in many
PTRH2
ENSSSCG00000017667
ENSG00000141378
Peptidyl-tRNA hydrolase 2
Tissue enhanced
Detected in many
lens:
16.3
PUF60
ENSSSCG00000038800
ENSG00000179950
Poly(U) binding splicing factor 60
Low tissue specificity
Detected in all
PXDN
ENSSSCG00000029570
ENSG00000130508
Peroxidasin
Tissue enhanced
Detected in many
adipose tissue:
32.7
ovary:
33.9
PYCR1
ENSSSCG00000034723
ENSG00000183010
Pyrroline-5-carboxylate reductase 1
Tissue enhanced
Detected in all
cartilage:
48.7
male glands:
82.7
salivary gland:
47.5
QARS
ENSSSCG00000032031
ENSG00000172053
Glutaminyl-tRNA synthetase
Low tissue specificity
Detected in all
QRICH1
ENSSSCG00000011373
ENSG00000198218
Glutamine rich 1
Low tissue specificity
Detected in all
RAB18
ENSSSCG00000028655
ENSG00000099246
RAB18, member RAS oncogene family
Low tissue specificity
Detected in all
RAB23
ENSSSCG00000029539
ENSG00000112210
RAB23, member RAS oncogene family
Tissue enhanced
Detected in all
smooth muscle:
49.7
RAB3GAP1
ENSSSCG00000015695
ENSG00000115839
RAB3 GTPase activating protein catalytic subunit 1
Low tissue specificity
Detected in all
RAB3GAP2
ENSSSCG00000010824
ENSG00000118873
RAB3 GTPase activating non-catalytic protein subunit 2
Low tissue specificity
Detected in all
RAD21
ENSSSCG00000006014
ENSG00000164754
RAD21 cohesin complex component
Low tissue specificity
Detected in all
RAF1
ENSSSCG00000024453
ENSG00000132155
Raf-1 proto-oncogene, serine/threonine kinase
Low tissue specificity
Detected in all
RARB
ENSSSCG00000011212
ENSG00000077092
Retinoic acid receptor beta
Low tissue specificity
Detected in all
RASA1
ENSSSCG00000014146
ENSG00000145715
RAS p21 protein activator 1
Low tissue specificity
Detected in all
RAX
ENSSSCG00000004910
ENSG00000134438
Retina and anterior neural fold homeobox
Group enriched
Detected in some
pituitary gland:
14.7
retina:
28.9
RBM10
ENSSSCG00000012271
ENSG00000182872
RNA binding motif protein 10
Low tissue specificity
Detected in all
RBM8A
ENSSSCG00000028509
ENSG00000265241
RNA binding motif protein 8A
Low tissue specificity
Detected in all
RBP4
ENSSSCG00000010479
ENSG00000138207
Retinol-binding protein 4 precursor
Group enriched
Detected in all
liver:
245.2
pineal gland:
94.9
RBPJ
ENSSSCG00000022155
ENSG00000168214
Recombination signal binding protein for immunoglobulin kappa J region
Low tissue specificity
Detected in all
RCBTB1
ENSSSCG00000021060
ENSG00000136144
RCC1 and BTB domain containing protein 1
Tissue enhanced
Detected in all
male glands:
55.0
RDH11
ENSSSCG00000002296
ENSG00000072042
Retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
Tissue enhanced
Detected in all
adrenal gland:
57.8
ovary:
62.2
testis:
122.1
RECQL4
ENSSSCG00000025736
ENSG00000160957
RecQ like helicase 4
Low tissue specificity
Detected in all
RELN
ENSSSCG00000015426
ENSG00000189056
Reelin
Group enriched
Detected in many
brain:
60.5
vagus nerve:
49.0
REN
ENSSSCG00000031235
ENSG00000143839
Renin
Low tissue specificity
Detected in all
RET
ENSSSCG00000010199
ENSG00000165731
Ret proto-oncogene
Tissue enriched
Detected in many
brain:
52.4
RIPK4
ENSSSCG00000012083
ENSG00000183421
Receptor interacting serine/threonine kinase 4
Tissue enhanced
Detected in all
cornea:
27.1
RIPPLY2
ENSSSCG00000004451
ENSG00000203877
Ripply transcriptional repressor 2
Group enriched
Detected in some
brain:
31.9
cartilage:
12.3
pineal gland:
28.7
pituitary gland:
16.9
RIT1
ENSSSCG00000023991
ENSG00000143622
GTP-binding protein Rit1
Low tissue specificity
Detected in all
RNF125
ENSSSCG00000003729
ENSG00000101695
Ring finger protein 125
Low tissue specificity
Detected in all
« prev
| Page
of 19 |
next »
MENU
