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Chromosome
1
2
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
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Stomach 1
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Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
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TISSUE SPECIFIC PROTEOME
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658 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
AARS2
ENSSSCG00000001706
ENSG00000124608
Alanyl-tRNA synthetase 2, mitochondrial
Low tissue specificity
Detected in all
AASS
ENSSSCG00000016613
ENSG00000008311
Alpha-aminoadipic semialdehyde synthase, mitochondrial
Tissue enhanced
Detected in all
heart:
27.8
liver:
58.3
ABAT
ENSSSCG00000007909
ENSG00000183044
4-aminobutyrate aminotransferase, mitochondrial
Tissue enhanced
Detected in many
brain:
48.0
kidney:
43.5
liver:
29.0
ABCA1
ENSSSCG00000005423
ENSG00000165029
ATP-binding cassette sub-family A member 1
Low tissue specificity
Detected in all
ABCC2
ENSSSCG00000010543
ENSG00000023839
ATP binding cassette subfamily C member 2
Group enriched
Detected in some
kidney:
33.8
liver:
71.6
ABCC8
ENSSSCG00000013378
ENSG00000006071
ATP binding cassette subfamily C member 8
Group enriched
Detected in some
brain:
17.6
vagus nerve:
57.7
ABCD1
ENSSSCG00000012779
ENSG00000101986
ATP binding cassette subfamily D member 1
Low tissue specificity
Detected in all
ABCD4
ENSSSCG00000038231
ENSG00000119688
ATP binding cassette subfamily D member 4
Low tissue specificity
Detected in all
ABCG5
ENSSSCG00000035912
ENSG00000138075
ATP binding cassette subfamily G member 5
Group enriched
Detected in some
liver:
30.9
small intestine:
12.6
ABCG8
ENSSSCG00000008453
ENSG00000143921
ATP binding cassette subfamily G member 8
Low tissue specificity
Detected in all
ABHD5
ENSSSCG00000011297
ENSG00000011198
1-acylglycerol-3-phosphate O-acyltransferase ABHD5
Low tissue specificity
Detected in all
ACAD9
ENSSSCG00000023354
ENSG00000177646
Acyl-CoA dehydrogenase family member 9
Low tissue specificity
Detected in all
ACADM
ENSSSCG00000003776
ENSG00000117054
Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
Tissue enhanced
Detected in all
heart:
61.2
skeletal muscle:
88.4
ACADS
ENSSSCG00000009916
ENSG00000122971
Short-chain specific acyl-CoA dehydrogenase, mitochondrial precursor
Tissue enhanced
Detected in all
large intestine:
53.4
ACADSB
ENSSSCG00000010723
ENSG00000196177
Acyl-CoA dehydrogenase short/branched chain
Tissue enhanced
Detected in all
liver:
85.0
ACADVL
ENSSSCG00000017947
ENSG00000072778
Acyl-CoA dehydrogenase very long chain
Tissue enhanced
Detected in all
heart:
69.1
skeletal muscle:
69.1
ACAT1
ENSSSCG00000026153
ENSG00000075239
Acetyl-CoA acetyltransferase 1
Tissue enhanced
Detected in all
skeletal muscle:
70.4
ACOX1
ENSSSCG00000017198
ENSG00000161533
Peroxisomal acyl-coenzyme A oxidase 1
Tissue enhanced
Detected in all
liver:
108.5
ACP2
ENSSSCG00000013242
ENSG00000134575
Lysosomal acid phosphatase precursor
Low tissue specificity
Detected in all
ACSF3
ENSSSCG00000023866
ENSG00000176715
Acyl-CoA synthetase family member 3
Low tissue specificity
Detected in all
ADCY10
ENSSSCG00000006305
ENSG00000143199
Adenylate cyclase type 10
Tissue enriched
Detected in some
testis:
32.7
ADIPOQ
ENSSSCG00000039103
ENSG00000181092
Adiponectin precursor
Group enriched
Detected in many
adipose tissue:
213.0
aorta:
64.3
bone marrow:
147.9
ADK
ENSSSCG00000010315
ENSG00000156110
Adenosine kinase
Tissue enhanced
Detected in all
liver:
37.5
ADSL
ENSSSCG00000000077
ENSG00000239900
Adenylosuccinate lyase
Tissue enhanced
Detected in all
skeletal muscle:
56.8
AFG3L2
ENSSSCG00000022947
ENSG00000141385
AFG3 like matrix AAA peptidase subunit 2
Low tissue specificity
Detected in all
AGA
ENSSSCG00000015772
ENSG00000038002
Aspartylglucosaminidase
Low tissue specificity
Detected in all
AGK
ENSSSCG00000016492
ENSG00000006530
Acylglycerol kinase, mitochondrial
Low tissue specificity
Detected in all
AGL
ENSSSCG00000006872
ENSG00000162688
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
Tissue enriched
Detected in all
skeletal muscle:
119.9
AGPAT2
ENSSSCG00000040845
ENSG00000169692
1-acyl-sn-glycerol-3-phosphate acyltransferase beta precursor
Low tissue specificity
Detected in many
AGPS
ENSSSCG00000023983
ENSG00000018510
Alkylglycerone phosphate synthase
Low tissue specificity
Detected in all
AGXT
ENSSSCG00000016402
ENSG00000172482
Alanine-glyoxylate aminotransferase
Group enriched
Detected in some
kidney:
67.1
liver:
90.1
AIFM1
ENSSSCG00000012657
ENSG00000156709
Apoptosis-inducing factor 1, mitochondrial
Low tissue specificity
Detected in all
AIMP1
ENSSSCG00000024168
ENSG00000164022
Aminoacyl tRNA synthase complex-interacting multifunctional protein 1
Low tissue specificity
Detected in all
AKT2
ENSSSCG00000002989
ENSG00000105221
RAC-beta serine/threonine-protein kinase
Tissue enhanced
Detected in all
adipose tissue:
96.5
ALAD
ENSSSCG00000032787
ENSG00000148218
Aminolevulinate dehydratase
Tissue enhanced
Detected in all
liver:
98.4
ALAS2
ENSSSCG00000012347
ENSG00000158578
5'-aminolevulinate synthase 2
Tissue enriched
Detected in many
dura mater:
84.4
ALDH18A1
ENSSSCG00000010495
ENSG00000059573
Aldehyde dehydrogenase 18 family member A1
Tissue enhanced
Detected in many
male glands:
70.8
ALDH2
ENSSSCG00000009889
ENSG00000111275
Aldehyde dehydrogenase, mitochondrial
Tissue enhanced
Detected in all
liver:
117.1
ALDH3A2
ENSSSCG00000018041
ENSG00000072210
Aldehyde dehydrogenase 3 family member A2
Low tissue specificity
Detected in all
ALDH4A1
ENSSSCG00000024752
ENSG00000159423
Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
Tissue enhanced
Detected in all
kidney:
61.1
liver:
78.9
ALDH5A1
ENSSSCG00000001090
ENSG00000112294
Succinate-semialdehyde dehydrogenase, mitochondrial
Tissue enhanced
Detected in all
liver:
38.4
ALDH6A1
ENSSSCG00000002357
ENSG00000119711
Aldehyde dehydrogenase 6 family member A1
Tissue enhanced
Detected in all
kidney:
85.2
ALDOB
ENSSSCG00000038300
ENSG00000136872
Aldolase, fructose-bisphosphate B
Group enriched
Detected in some
kidney:
156.9
liver:
172.6
ALG11
ENSSSCG00000009381
ENSG00000253710
ALG11, alpha-1,2-mannosyltransferase
Low tissue specificity
Detected in all
ALG12
ENSSSCG00000000980
ENSG00000182858
ALG12, alpha-1,6-mannosyltransferase
Low tissue specificity
Detected in all
ALG13
ENSSSCG00000012586
ENSG00000101901
ALG13, UDP-N-acetylglucosaminyltransferase subunit
Low tissue specificity
Detected in all
ALG2
ENSSSCG00000005383
ENSG00000119523
Alpha-1,3/1,6-mannosyltransferase ALG2
Tissue enriched
Detected in all
male glands:
68.2
ALG3
ENSSSCG00000021319
ENSG00000214160
ALG3, alpha-1,3- mannosyltransferase
Low tissue specificity
Detected in all
ALG6
ENSSSCG00000003815
ENSG00000088035
ALG6, alpha-1,3-glucosyltransferase
Low tissue specificity
Detected in all
ALG8
ENSSSCG00000014887
ENSG00000159063
ALG8, alpha-1,3-glucosyltransferase
Low tissue specificity
Detected in all
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