We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
658 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 14 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ALPL
ENSSSCG00000032607
ENSG00000162551
Alkaline phosphatase, liver/bone/kidney
Tissue enhanced
Detected in many
dura mater:
56.0
kidney:
77.7
AMACR
ENSSSCG00000016822
ENSG00000242110
Alpha-methylacyl-CoA racemase
Tissue enhanced
Detected in all
liver:
62.6
AMPD1
ENSSSCG00000006754
ENSG00000116748
AMP deaminase 1
Tissue enriched
Detected in many
skeletal muscle:
107.7
AMPD3
ENSSSCG00000022492
ENSG00000133805
Adenosine monophosphate deaminase 3
Low tissue specificity
Detected in all
AMT
ENSSSCG00000022975
ENSG00000145020
Aminomethyltransferase, mitochondrial
Tissue enhanced
Detected in many
lens:
24.0
liver:
17.8
ANGPTL3
ENSSSCG00000003819
ENSG00000132855
Angiopoietin-related protein 3 precursor
Tissue enriched
Detected in some
liver:
97.0
AP2S1
ENSSSCG00000003106
ENSG00000042753
AP-2 complex subunit sigma isoform 2
Low tissue specificity
Detected in all
AP3B1
ENSSSCG00000014101
ENSG00000132842
AP-3 complex subunit beta-1
Low tissue specificity
Detected in all
APOA1
ENSSSCG00000030921
ENSG00000118137
Apolipoprotein A-I preproprotein
Group enriched
Detected in many
liver:
330.7
vagus nerve:
134.4
APOA5
ENSSSCG00000015067
ENSG00000110243
Apolipoprotein A-V precursor
Tissue enriched
Detected in some
liver:
64.0
APOB
ENSSSCG00000008595
ENSG00000084674
Apolipoprotein B-100
Tissue enriched
Detected in some
liver:
207.3
APOC2
ENSSSCG00000003086
ENSG00000234906
Apolipoprotein C-II precursor
Tissue enriched
Detected in some
liver:
223.8
APOC3
ENSSSCG00000015069
ENSG00000110245
Apolipoprotein C-III
Tissue enriched
Detected in some
liver:
814.1
APOE
ENSSSCG00000003088
ENSG00000130203
Apolipoprotein E precursor
Tissue enriched
Detected in many
liver:
755.1
APRT
ENSSSCG00000002650
ENSG00000198931
Adenine phosphoribosyltransferase
Tissue enhanced
Detected in all
adrenal gland:
56.0
ARG1
ENSSSCG00000004195
ENSG00000118520
Arginase-1
Tissue enriched
Detected in some
liver:
104.1
ARL6
ENSSSCG00000027278
ENSG00000113966
ADP ribosylation factor like GTPase 6
Low tissue specificity
Detected in all
ARSA
ENSSSCG00000032428
ENSG00000100299
Arylsulfatase A precursor
Low tissue specificity
Detected in all
ARSB
ENSSSCG00000038535
ENSG00000113273
Arylsulfatase B
Tissue enhanced
Detected in many
brain:
56.3
kidney:
31.9
ASAH1
ENSSSCG00000006995
ENSG00000104763
N-acylsphingosine amidohydrolase 1
Tissue enhanced
Detected in all
choroid plexus:
100.9
ASNS
ENSSSCG00000015340
ENSG00000070669
Asparagine synthetase
Low tissue specificity
Detected in all
ASPA
ENSSSCG00000017861
ENSG00000108381
Aspartoacylase
Tissue enhanced
Detected in many
brain:
56.0
kidney:
19.8
vagus nerve:
32.5
ASS1
ENSSSCG00000005701
ENSG00000130707
Argininosuccinate synthase 1
Group enriched
Detected in many
kidney:
136.1
liver:
198.2
ATIC
ENSSSCG00000016173
ENSG00000138363
Bifunctional purine biosynthesis protein PURH
Low tissue specificity
Detected in all
ATP5F1A
ENSSSCG00000004499
ENSG00000152234
ATP synthase subunit alpha, mitochondrial
Tissue enhanced
Detected in all
heart:
121.2
skeletal muscle:
114.5
ATP5F1E
ENSSSCG00000007524
ENSG00000124172
ATP synthase subunit epsilon, mitochondrial
Low tissue specificity
Detected in all
ATP6
ENSSSCG00000018081
ENSG00000198899
ATP synthase subunit a
Tissue enhanced
Detected in all
heart:
1899.7
ATP7A
ENSSSCG00000012437
ENSG00000165240
ATPase copper transporting alpha
Low tissue specificity
Detected in all
ATP8
ENSSSCG00000018080
ENSG00000228253
ATP synthase protein 8
Tissue enhanced
Detected in all
heart:
1761.6
ATPAF2
ENSSSCG00000028712
ENSG00000171953
ATP synthase mitochondrial F1 complex assembly factor 2
Low tissue specificity
Detected in all
AUH
ENSSSCG00000009591
ENSG00000148090
AU RNA binding methylglutaconyl-CoA hydratase
Low tissue specificity
Detected in all
B3GALNT2
ENSSSCG00000033692
ENSG00000162885
Beta-1,3-N-acetylgalactosaminyltransferase 2
Low tissue specificity
Detected in all
B3GAT3
ENSSSCG00000020809
ENSG00000149541
Beta-1,3-glucuronyltransferase 3
Low tissue specificity
Detected in all
B4GALT1
ENSSSCG00000035454
ENSG00000086062
Beta-1,4-galactosyltransferase 1
Low tissue specificity
Detected in all
B4GAT1
ENSSSCG00000012940
ENSG00000174684
Beta-1,4-glucuronyltransferase 1
Tissue enhanced
Detected in many
brain:
41.1
BAAT
ENSSSCG00000035245
ENSG00000136881
Bile acid-CoA:amino acid N-acyltransferase
Tissue enhanced
Detected in some
fallopian tube:
3.1
testis:
7.5
BBS10
ENSSSCG00000000523
ENSG00000179941
Bardet-Biedl syndrome 10
Low tissue specificity
Detected in all
BBS12
ENSSSCG00000026290
ENSG00000181004
Bardet-Biedl syndrome 12
Low tissue specificity
Detected in all
BBS2
ENSSSCG00000025417
ENSG00000125124
Bardet-Biedl syndrome 2
Low tissue specificity
Detected in all
BBS4
ENSSSCG00000001924
ENSG00000140463
Bardet-Biedl syndrome 4 protein
Low tissue specificity
Detected in all
BBS5
ENSSSCG00000015931
ENSG00000163093
Bardet-Biedl syndrome 5
Low tissue specificity
Detected in many
BBS7
ENSSSCG00000009093
ENSG00000138686
Bardet-Biedl syndrome 7
Low tissue specificity
Detected in all
BBS9
ENSSSCG00000024754
ENSG00000122507
Bardet-Biedl syndrome 9
Tissue enhanced
Detected in all
fallopian tube:
47.6
BCKDHB
ENSSSCG00000004465
ENSG00000083123
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial
Tissue enhanced
Detected in all
testis:
70.0
BCKDK
ENSSSCG00000007763
ENSG00000103507
Branched chain ketoacid dehydrogenase kinase
Low tissue specificity
Detected in all
BCO1
ENSSSCG00000036572
ENSG00000135697
Beta,beta-carotene 15,15'-dioxygenase
Tissue enhanced
Detected in all
liver:
46.7
small intestine:
30.2
BCS1L
ENSSSCG00000035775
ENSG00000074582
BCS1-like
Low tissue specificity
Detected in all
BLOC1S6
ENSSSCG00000037384
ENSG00000104164
Biogenesis of lysosome-related organelles complex 1 subunit 6
Low tissue specificity
Detected in all
BLVRA
ENSSSCG00000016756
ENSG00000106605
Biliverdin reductase A
Low tissue specificity
Detected in all
BSCL2
ENSSSCG00000020823
ENSG00000168000
Seipin isoform 1
Tissue enhanced
Detected in all
testis:
129.5
« prev
| Page
of 14 |
next »