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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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503 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
KIF12
ENSSSCG00000005486
ENSG00000136883
Kinesin family member 12
Tissue enhanced
Detected in many
kidney:
56.3
KIF26B
ENSSSCG00000010879
ENSG00000162849
Kinesin family member 26B
Tissue enhanced
Detected in many
heart:
31.5
kidney:
19.4
KLHDC7A
ENSSSCG00000023732
ENSG00000179023
Kelch domain containing 7A
Tissue enhanced
Detected in many
epididymis:
27.1
kidney:
27.2
male glands:
54.8
KLHL14
ENSSSCG00000003733
ENSG00000197705
Kelch like family member 14
Tissue enhanced
Detected in many
kidney:
16.0
male glands:
43.9
thyroid gland:
26.4
KMO
ENSSSCG00000025686
ENSG00000117009
Kynurenine 3-monooxygenase
Tissue enhanced
Detected in many
kidney:
24.8
liver:
62.8
L1CAM
ENSSSCG00000012787
ENSG00000198910
L1 cell adhesion molecule
Tissue enhanced
Detected in many
ductus deferens:
55.0
kidney:
58.6
vagus nerve:
52.3
LGMN
ENSSSCG00000002452
ENSG00000100600
Legumain
Tissue enhanced
Detected in all
kidney:
124.7
synovial tissue:
131.5
MARC2
ENSSSCG00000010826
ENSG00000117791
Mitochondrial amidoxime reducing component 2
Tissue enhanced
Detected in all
kidney:
53.3
liver:
81.3
MEP1B
ENSSSCG00000003732
ENSG00000141434
Meprin A subunit beta
Tissue enhanced
Detected in some
kidney:
14.4
small intestine:
35.5
MFAP3L
ENSSSCG00000009709
ENSG00000198948
Microfibril associated protein 3 like
Tissue enhanced
Detected in many
brain:
24.9
kidney:
38.9
skin:
23.6
MME
ENSSSCG00000011723
ENSG00000196549
Membrane metalloendopeptidase
Tissue enhanced
Detected in many
choroid plexus:
43.9
endometrium:
40.3
kidney:
60.8
ovary:
39.6
MMP3
ENSSSCG00000014985
ENSG00000149968
Interstitial collagenase 18 kDa interstitial collagenase
Tissue enhanced
Detected in many
small intestine:
36.8
upper respiratory system:
34.7
urinary bladder:
43.0
MPPED2
ENSSSCG00000013327
ENSG00000066382
Metallophosphoesterase domain containing 2
Tissue enhanced
Detected in many
kidney:
28.2
male glands:
33.9
MROH6
ENSSSCG00000006948
ENSG00000204839
Maestro heat like repeat family member 6
Tissue enhanced
Detected in many
mouth:
12.4
skin:
9.2
urinary bladder:
13.5
MSRA
ENSSSCG00000009684
ENSG00000175806
Methionine sulfoxide reductase A
Tissue enhanced
Detected in all
brain:
47.4
kidney:
39.7
liver:
46.1
MYCL
ENSSSCG00000039761
ENSG00000116990
MYCL proto-oncogene, bHLH transcription factor
Tissue enhanced
Detected in many
stomach:
21.9
upper respiratory system:
27.0
urinary bladder:
33.8
MYH11
ENSSSCG00000000146
ENSG00000133392
Myosin heavy chain 11
Tissue enhanced
Detected in many
ductus deferens:
178.9
smooth muscle:
565.6
urinary bladder:
187.5
MYL9
ENSSSCG00000036402
ENSG00000101335
Myosin regulatory light polypeptide 9
Tissue enhanced
Detected in many
smooth muscle:
241.8
urinary bladder:
100.0
MYO1H
ENSSSCG00000009935
ENSG00000174527
Myosin IH
Tissue enhanced
Detected in some
kidney:
3.9
male glands:
6.8
MYO7A
ENSSSCG00000014876
ENSG00000137474
Unconventional myosin-VIIa
Tissue enhanced
Detected in many
adrenal gland:
29.3
kidney:
37.4
na
ENSSSCG00000000615
Tissue enhanced
Detected in some
kidney:
3.8
lung:
3.4
testis:
4.2
upper respiratory system:
3.1
na
ENSSSCG00000001596
ENSG00000124615
Tissue enhanced
Detected in all
kidney:
48.2
liver:
53.3
mouth:
50.4
na
ENSSSCG00000001776
Tissue enhanced
Detected in some
kidney:
10.2
liver:
7.7
na
ENSSSCG00000002351
ENSG00000140043
Tissue enhanced
Detected in all
kidney:
48.4
liver:
52.3
na
ENSSSCG00000002720
ENSG00000140839,ENSG00000157322,ENSG00000157335
Tissue enhanced
Detected in some
choroid plexus:
102.5
kidney:
65.9
na
ENSSSCG00000003326
ENSG00000198300
Tissue enhanced
Detected in all
brain:
42.8
kidney:
27.9
pituitary gland:
36.3
na
ENSSSCG00000003753
PDZK1-interacting protein 1 precursor
Tissue enhanced
Detected in many
adrenal gland:
62.1
kidney:
46.4
ovary:
121.6
testis:
30.0
na
ENSSSCG00000004197
Tissue enhanced
Detected in many
esophagus:
4.4
kidney:
6.8
upper respiratory system:
9.5
na
ENSSSCG00000005534
Tissue enhanced
Detected in some
cornea:
6.8
gallbladder:
6.4
kidney:
5.5
lens:
6.8
vagus nerve:
3.6
na
ENSSSCG00000005558
Tissue enhanced
Detected in some
cornea:
7.4
kidney:
5.3
lens:
8.1
na
ENSSSCG00000005568
Tissue enhanced
Detected in some
cornea:
4.9
kidney:
2.6
lens:
5.0
vagus nerve:
3.2
na
ENSSSCG00000005868
Tissue enhanced
Detected in some
cartilage:
2.5
cornea:
4.9
gallbladder:
3.5
kidney:
3.4
na
ENSSSCG00000005873
Tissue enhanced
Detected in some
brain:
3.0
choroid plexus:
1.5
kidney:
1.4
na
ENSSSCG00000006525
ENSG00000185499
Tissue enhanced
Detected in many
ductus deferens:
54.4
gallbladder:
54.0
kidney:
50.9
stomach:
70.9
na
ENSSSCG00000007135
ENSG00000101004
Tissue enhanced
Detected in many
cartilage:
37.1
kidney:
24.5
mesothelial tissue:
34.5
na
ENSSSCG00000008115
ENSG00000172005
Tissue enhanced
Detected in many
brain:
64.7
kidney:
55.1
stomach:
57.4
vagus nerve:
70.1
na
ENSSSCG00000008314
ENSG00000116039
Tissue enhanced
Detected in some
fallopian tube:
33.6
kidney:
103.8
na
ENSSSCG00000008511
Tissue enhanced
Detected in many
kidney:
40.3
urinary bladder:
41.8
na
ENSSSCG00000009495
Tissue enhanced
Detected in some
dura mater:
9.6
kidney:
3.8
small intestine:
5.3
testis:
3.9
na
ENSSSCG00000009500
Claudin-10 precursor
Tissue enhanced
Detected in many
esophagus:
80.3
fallopian tube:
22.7
kidney:
25.1
upper respiratory system:
25.0
na
ENSSSCG00000009710
Tissue enhanced
Detected in many
kidney:
13.6
skin:
17.2
vagus nerve:
13.3
na
ENSSSCG00000009892
Tissue enhanced
Detected in some
kidney:
12.5
salivary gland:
7.8
testis:
30.5
na
ENSSSCG00000009895
Tissue enhanced
Detected in some
kidney:
7.4
salivary gland:
6.1
testis:
22.7
na
ENSSSCG00000010068
Tissue enhanced
Detected in all
kidney:
45.8
na
ENSSSCG00000010278
ENSG00000107736
Tissue enhanced
Detected in many
urinary bladder:
27.7
na
ENSSSCG00000010328
Tissue enhanced
Detected in some
brain:
1.6
kidney:
1.6
male glands:
1.9
na
ENSSSCG00000010546
Cytochrome P450 2C33
Tissue enhanced
Detected in some
cartilage:
96.1
epididymis:
86.8
kidney:
142.2
liver:
421.6
na
ENSSSCG00000010549
Tissue enhanced
Detected in some
cartilage:
57.9
epididymis:
96.8
kidney:
86.4
liver:
191.1
na
ENSSSCG00000010936
Tissue enhanced
Detected in some
kidney:
3.9
lens:
4.3
na
ENSSSCG00000011147
Aldo-keto reductase family 1 member C1
Tissue enhanced
Detected in all
adrenal gland:
193.7
kidney:
86.8
liver:
154.5
ovary:
83.5
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