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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Endocrine and metabolic diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Skin diseases
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Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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409 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000038585
Tissue enriched
Detected in single
brain:
3.4
na
ENSSSCG00000038747
Tissue enriched
Detected in single
brain:
2.5
na
ENSSSCG00000038793
Tissue enriched
Detected in single
brain:
1.2
na
ENSSSCG00000038822
Tissue enriched
Detected in single
brain:
4.5
na
ENSSSCG00000039006
Tissue enriched
Detected in some
brain:
18.9
na
ENSSSCG00000039070
ENSG00000146910
Tissue enriched
Detected in all
brain:
34.3
na
ENSSSCG00000039076
ENSG00000138495
Tissue enriched
Detected in single
brain:
32.3
na
ENSSSCG00000039334
Tissue enriched
Detected in some
brain:
123.6
na
ENSSSCG00000039389
Tissue enriched
Detected in single
brain:
4.6
na
ENSSSCG00000039409
Tissue enriched
Detected in single
brain:
2.9
na
ENSSSCG00000039445
ENSG00000183908
Tissue enriched
Detected in some
brain:
20.7
na
ENSSSCG00000039513
Tissue enriched
Detected in single
brain:
4.0
na
ENSSSCG00000039630
Tissue enriched
Detected in some
brain:
213.8
na
ENSSSCG00000039653
Tissue enriched
Detected in single
brain:
1.7
na
ENSSSCG00000039788
Tissue enriched
Detected in some
brain:
9.2
na
ENSSSCG00000039828
Tissue enriched
Detected in many
brain:
79.9
na
ENSSSCG00000039902
Tissue enriched
Detected in some
brain:
115.0
na
ENSSSCG00000040044
Tissue enriched
Detected in single
brain:
2.1
na
ENSSSCG00000040047
Tissue enriched
Detected in many
brain:
39.0
na
ENSSSCG00000040091
Tissue enriched
Detected in single
brain:
1.5
na
ENSSSCG00000040093
Tissue enriched
Detected in some
brain:
60.9
na
ENSSSCG00000040212
Tissue enriched
Detected in single
brain:
2.9
na
ENSSSCG00000040258
Tissue enriched
Detected in some
brain:
13.0
na
ENSSSCG00000040326
Tissue enriched
Detected in some
brain:
19.0
na
ENSSSCG00000040342
ENSG00000174939
Tissue enriched
Detected in some
brain:
25.2
na
ENSSSCG00000040343
Tissue enriched
Detected in single
brain:
12.9
na
ENSSSCG00000040477
Tissue enriched
Detected in single
brain:
3.0
na
ENSSSCG00000040496
Tissue enriched
Detected in single
brain:
4.0
na
ENSSSCG00000040508
Tissue enriched
Detected in some
brain:
13.9
na
ENSSSCG00000040625
Tissue enriched
Detected in single
brain:
2.7
na
ENSSSCG00000040650
ENSG00000284299
Tissue enriched
Detected in some
brain:
24.8
na
ENSSSCG00000040778
ENSG00000170113
Tissue enriched
Detected in many
brain:
44.8
NACAD
ENSSSCG00000016733
ENSG00000136274
NAC alpha domain containing
Tissue enriched
Detected in many
brain:
42.4
NAT8L
ENSSSCG00000033541
ENSG00000185818
N-acetyltransferase 8 like
Tissue enriched
Detected in some
brain:
39.9
NCAN
ENSSSCG00000032131
ENSG00000130287
Neurocan
Tissue enriched
Detected in some
brain:
43.4
NECAB2
ENSSSCG00000038048
ENSG00000103154
N-terminal EF-hand calcium binding protein 2
Tissue enriched
Detected in some
brain:
61.6
NEFH
ENSSSCG00000009979
ENSG00000100285
Neurofilament heavy
Tissue enriched
Detected in some
brain:
168.4
NEUROD2
ENSSSCG00000033583
ENSG00000171532
Neuronal differentiation 2
Tissue enriched
Detected in some
brain:
43.0
NEUROD6
ENSSSCG00000039501
ENSG00000164600
Neuronal differentiation 6
Tissue enriched
Detected in single
brain:
49.9
NGB
ENSSSCG00000002399
ENSG00000165553
Neuroglobin
Tissue enriched
Detected in many
brain:
35.2
NHLH1
ENSSSCG00000006384
ENSG00000171786
Nescient helix-loop-helix 1
Tissue enriched
Detected in many
brain:
30.1
NKAIN2
ENSSSCG00000036607
ENSG00000188580
Sodium/potassium transporting ATPase interacting 2
Tissue enriched
Detected in some
brain:
44.6
NKX2-2
ENSSSCG00000040017
ENSG00000125820
NK2 homeobox 2
Tissue enriched
Detected in some
brain:
17.6
NPS
ENSSSCG00000010751
ENSG00000214285
Neuropeptide S
Tissue enriched
Detected in single
brain:
13.1
NPTXR
ENSSSCG00000000092
ENSG00000221890
Neuronal pentraxin receptor
Tissue enriched
Detected in many
brain:
54.3
NRGN
ENSSSCG00000039322
ENSG00000154146
Neurogranin
Tissue enriched
Detected in many
brain:
320.1
NRSN1
ENSSSCG00000021696
ENSG00000152954
Neurensin 1
Tissue enriched
Detected in many
brain:
50.9
NTSR2
ENSSSCG00000008625
ENSG00000169006
Neurotensin receptor 2
Tissue enriched
Detected in some
brain:
20.1
NXPH1
ENSSSCG00000037207
ENSG00000122584
Neurexophilin 1
Tissue enriched
Detected in some
brain:
19.2
OLIG1
ENSSSCG00000012040
ENSG00000184221
Oligodendrocyte transcription factor 1
Tissue enriched
Detected in some
brain:
71.2
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