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Gene name
Human disease related genes
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External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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409 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
KLK6
ENSSSCG00000039984
ENSG00000167755
Kallikrein related peptidase 6
Tissue enriched
Detected in some
brain:
85.6
LAMP5
ENSSSCG00000007062
ENSG00000125869
Lysosomal associated membrane protein family member 5
Tissue enriched
Detected in some
brain:
55.1
LCN9
ENSSSCG00000039855
ENSG00000148386
Lipocalin 9
Tissue enriched
Detected in many
brain:
33.9
LINGO4
ENSSSCG00000026259
ENSG00000213171
Leucine rich repeat and Ig domain containing 4
Tissue enriched
Detected in some
brain:
29.5
LY6H
ENSSSCG00000033353
ENSG00000176956
Lymphocyte antigen 6 family member H
Tissue enriched
Detected in some
brain:
17.0
MAG
ENSSSCG00000002887
ENSG00000105695
Myelin associated glycoprotein
Tissue enriched
Detected in some
brain:
138.2
MAP1A
ENSSSCG00000004705
ENSG00000166963
Microtubule associated protein 1A
Tissue enriched
Detected in many
brain:
71.4
MAP6D1
ENSSSCG00000032328
ENSG00000180834
MAP6 domain containing 1
Tissue enriched
Detected in many
brain:
43.4
MAS1
ENSSSCG00000004045
ENSG00000130368
MAS1 proto-oncogene, G protein-coupled receptor
Tissue enriched
Detected in some
brain:
23.8
MBP
ENSSSCG00000038767
ENSG00000197971
Myelin basic protein
Tissue enriched
Detected in many
brain:
877.6
MCHR1
ENSSSCG00000000074
ENSG00000128285
Melanin-concentrating hormone receptor 1
Tissue enriched
Detected in some
brain:
21.6
MCMBP
ENSSSCG00000010688
ENSG00000197771
Mini-chromosome maintenance complex-binding protein
Tissue enriched
Detected in all
brain:
60.3
MEGF11
ENSSSCG00000004939
ENSG00000157890
Multiple EGF like domains 11
Tissue enriched
Detected in many
brain:
38.2
MGAT5B
ENSSSCG00000017170
ENSG00000167889
Mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
Tissue enriched
Detected in some
brain:
29.0
MLC1
ENSSSCG00000000978
ENSG00000100427
Megalencephalic leukoencephalopathy with subcortical cysts 1
Tissue enriched
Detected in some
brain:
42.7
MOG
ENSSSCG00000001248
ENSG00000204655
Myelin-oligodendrocyte glycoprotein precursor
Tissue enriched
Detected in some
brain:
170.0
MPPE1
ENSSSCG00000028126
ENSG00000154889
Metallophosphoesterase 1
Tissue enriched
Detected in many
brain:
51.3
MS4A15
ENSSSCG00000034847
ENSG00000166961
Membrane spanning 4-domains A15
Tissue enriched
Detected in single
brain:
30.0
na
ENSSSCG00000000882
ENSG00000185046
Tissue enriched
Detected in many
brain:
64.8
na
ENSSSCG00000004674
Tissue enriched
Detected in many
brain:
57.1
na
ENSSSCG00000004850
ENSG00000104059
Tissue enriched
Detected in some
brain:
26.0
na
ENSSSCG00000006320
Tissue enriched
Detected in single
brain:
8.4
na
ENSSSCG00000006963
Tissue enriched
Detected in many
brain:
48.2
na
ENSSSCG00000007398
Tissue enriched
Detected in some
brain:
38.4
na
ENSSSCG00000010891
Tissue enriched
Detected in some
brain:
8.1
na
ENSSSCG00000011178
ENSG00000196353
Tissue enriched
Detected in some
brain:
44.0
na
ENSSSCG00000011267
ENSG00000168314
Tissue enriched
Detected in some
brain:
414.6
na
ENSSSCG00000011780
Tissue enriched
Detected in single
brain:
3.7
na
ENSSSCG00000012196
ENSG00000169306
Tissue enriched
Detected in some
brain:
17.6
na
ENSSSCG00000013024
Tissue enriched
Detected in some
brain:
59.1
na
ENSSSCG00000013387
ENSG00000175868
Calcitonin receptor-stimulating peptide 2
Tissue enriched
Detected in some
brain:
23.7
na
ENSSSCG00000013922
Tissue enriched
Detected in many
brain:
47.7
na
ENSSSCG00000014643
Tissue enriched
Detected in single
brain:
5.6
na
ENSSSCG00000014704
Tissue enriched
Detected in single
brain:
3.5
na
ENSSSCG00000017749
ENSG00000126860,ENSG00000265118
Tissue enriched
Detected in many
brain:
93.5
na
ENSSSCG00000021315
Tissue enriched
Detected in some
brain:
84.1
na
ENSSSCG00000022083
Tissue enriched
Detected in some
brain:
45.7
na
ENSSSCG00000024302
Tissue enriched
Detected in some
brain:
57.9
na
ENSSSCG00000024615
Tissue enriched
Detected in single
brain:
5.1
na
ENSSSCG00000026140
ENSG00000160307
Tissue enriched
Detected in many
brain:
149.5
na
ENSSSCG00000027279
Tissue enriched
Detected in many
brain:
25.0
na
ENSSSCG00000027970
ENSG00000167371
Tissue enriched
Detected in many
brain:
53.2
na
ENSSSCG00000028467
Tissue enriched
Detected in single
brain:
1.1
na
ENSSSCG00000030029
ENSG00000163530
Tissue enriched
Detected in single
brain:
3.8
na
ENSSSCG00000030075
Tissue enriched
Detected in some
brain:
11.8
na
ENSSSCG00000031146
Tissue enriched
Detected in some
brain:
25.0
na
ENSSSCG00000031347
Tissue enriched
Detected in many
brain:
117.4
na
ENSSSCG00000031555
Tissue enriched
Detected in single
brain:
2.3
na
ENSSSCG00000031558
Tissue enriched
Detected in some
brain:
23.8
na
ENSSSCG00000031603
Tissue enriched
Detected in single
brain:
3.3
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