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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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409 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
CPNE5
ENSSSCG00000001567
ENSG00000124772
Copine 5
Tissue enriched
Detected in some
brain:
65.8
CPNE6
ENSSSCG00000002011
ENSG00000100884
Copine 6
Tissue enriched
Detected in some
brain:
76.3
CRHBP
ENSSSCG00000014093
ENSG00000145708
Corticotropin-releasing factor-binding protein precursor
Tissue enriched
Detected in all
brain:
22.3
CTXN1
ENSSSCG00000036220
ENSG00000178531
Cortexin 1
Tissue enriched
Detected in some
brain:
90.5
CYP46A1
ENSSSCG00000002510
ENSG00000036530
Cytochrome P450 family 46 subfamily A member 1
Tissue enriched
Detected in some
brain:
54.2
DDN
ENSSSCG00000000184
ENSG00000181418
Dendrin
Tissue enriched
Detected in some
brain:
60.6
DISP2
ENSSSCG00000004776
ENSG00000140323
Dispatched RND transporter family member 2
Tissue enriched
Detected in many
brain:
27.8
DLGAP3
ENSSSCG00000040173
ENSG00000116544
DLG associated protein 3
Tissue enriched
Detected in some
brain:
41.0
DLX1
ENSSSCG00000015953
ENSG00000144355
Distal-less homeobox 1
Tissue enriched
Detected in some
brain:
47.9
DOC2A
ENSSSCG00000034635
ENSG00000149927
Double C2 domain alpha
Tissue enriched
Detected in many
brain:
22.6
DPP10
ENSSSCG00000015711
ENSG00000175497
Dipeptidyl peptidase like 10
Tissue enriched
Detected in some
brain:
33.2
DPP6
ENSSSCG00000016423
ENSG00000130226
Dipeptidyl peptidase like 6
Tissue enriched
Detected in some
brain:
44.0
DPYSL5
ENSSSCG00000008560
ENSG00000157851
Dihydropyrimidinase like 5
Tissue enriched
Detected in some
brain:
45.2
DRD1
ENSSSCG00000029037
ENSG00000184845
D(1A) dopamine receptor
Tissue enriched
Detected in some
brain:
47.5
DRD3
ENSSSCG00000011911
ENSG00000151577
Dopamine receptor D3
Tissue enriched
Detected in some
brain:
26.2
ECEL1
ENSSSCG00000016285
ENSG00000171551
Endothelin converting enzyme like 1
Tissue enriched
Detected in some
brain:
32.7
ELAVL3
ENSSSCG00000013617
ENSG00000196361
ELAV like RNA binding protein 3
Tissue enriched
Detected in some
brain:
43.3
ELAVL4
ENSSSCG00000037291
ENSG00000162374
ELAV like RNA binding protein 4
Tissue enriched
Detected in some
brain:
31.8
EN2
ENSSSCG00000035324
ENSG00000164778
Engrailed homeobox 2
Tissue enriched
Detected in single
brain:
41.0
ENC1
ENSSSCG00000014072
ENSG00000171617
Ectodermal-neural cortex 1
Tissue enriched
Detected in many
brain:
112.4
ERMN
ENSSSCG00000034503
ENSG00000136541
Ermin
Tissue enriched
Detected in some
brain:
159.1
FAM131A
ENSSSCG00000028372
ENSG00000175182
Protein FAM131A
Tissue enriched
Detected in many
brain:
35.6
FAM131B
ENSSSCG00000028274
ENSG00000159784
Family with sequence similarity 131 member B
Tissue enriched
Detected in some
brain:
28.3
FAM181B
ENSSSCG00000014897
ENSG00000182103
Family with sequence similarity 181 member B
Tissue enriched
Detected in many
brain:
31.5
FAM19A2
ENSSSCG00000034686
ENSG00000198673
Family with sequence similarity 19 member A2, C-C motif chemokine like
Tissue enriched
Detected in some
brain:
30.5
FAT2
ENSSSCG00000017084
ENSG00000086570
FAT atypical cadherin 2
Tissue enriched
Detected in many
brain:
98.8
FBXL16
ENSSSCG00000008006
ENSG00000127585
F-box and leucine rich repeat protein 16
Tissue enriched
Detected in many
brain:
117.3
FBXO41
ENSSSCG00000008302
ENSG00000163013
F-box protein 41
Tissue enriched
Detected in some
brain:
26.0
FERD3L
ENSSSCG00000015371
ENSG00000146618
Fer3 like bHLH transcription factor
Tissue enriched
Detected in some
brain:
31.2
FOXB1
ENSSSCG00000035244
ENSG00000171956
Forkhead box B1
Tissue enriched
Detected in some
brain:
16.0
FRMPD3
ENSSSCG00000012561
ENSG00000147234
FERM and PDZ domain containing 3
Tissue enriched
Detected in some
brain:
15.2
FRRS1L
ENSSSCG00000038824
ENSG00000260230
Ferric chelate reductase 1 like
Tissue enriched
Detected in many
brain:
27.5
GABBR2
ENSSSCG00000027558
ENSG00000136928
Gamma-aminobutyric acid type B receptor subunit 2
Tissue enriched
Detected in some
brain:
44.5
GABRA2
ENSSSCG00000028922
ENSG00000151834
Gamma-aminobutyric acid type A receptor alpha2 subunit
Tissue enriched
Detected in some
brain:
50.1
GABRA3
ENSSSCG00000025708
ENSG00000011677
Gamma-aminobutyric acid type A receptor alpha3 subunit
Tissue enriched
Detected in some
brain:
28.9
GABRA4
ENSSSCG00000030515
ENSG00000109158
Gamma-aminobutyric acid type A receptor alpha4 subunit
Tissue enriched
Detected in some
brain:
34.0
GABRA5
ENSSSCG00000004827
ENSG00000186297
Gamma-aminobutyric acid type A receptor alpha5 subunit
Tissue enriched
Detected in some
brain:
41.3
GABRA6
ENSSSCG00000017027
ENSG00000145863
Gamma-aminobutyric acid type A receptor alpha6 subunit
Tissue enriched
Detected in some
brain:
67.3
GABRB2
ENSSSCG00000033558
ENSG00000145864
Gamma-aminobutyric acid type A receptor beta2 subunit
Tissue enriched
Detected in some
brain:
55.1
GABRQ
ENSSSCG00000012755
ENSG00000268089
Gamma-aminobutyric acid type A receptor theta subunit
Tissue enriched
Detected in some
brain:
26.4
GAD1
ENSSSCG00000022233
ENSG00000128683
Glutamate decarboxylase 1
Tissue enriched
Detected in some
brain:
131.0
GAP43
ENSSSCG00000031244
ENSG00000172020
Neuromodulin
Tissue enriched
Detected in many
brain:
43.8
GBX2
ENSSSCG00000016319
ENSG00000168505
Gastrulation brain homeobox 2
Tissue enriched
Detected in single
brain:
13.5
GDA
ENSSSCG00000034919
ENSG00000119125
Guanine deaminase
Tissue enriched
Detected in some
brain:
32.3
GDF11
ENSSSCG00000000363
ENSG00000135414
Growth/differentiation factor 11 precursor
Tissue enriched
Detected in many
brain:
58.1
GJC2
ENSSSCG00000013989
ENSG00000198835
Gap junction protein gamma 2
Tissue enriched
Detected in some
brain:
58.1
GNAL
ENSSSCG00000022163
ENSG00000141404
G protein subunit alpha L
Tissue enriched
Detected in some
brain:
67.5
GNG4
ENSSSCG00000033307
ENSG00000168243
G protein subunit gamma 4
Tissue enriched
Detected in some
brain:
95.3
GNG7
ENSSSCG00000033949
ENSG00000176533
G protein subunit gamma 7
Tissue enriched
Detected in all
brain:
110.7
GNRH1
ENSSSCG00000009651
ENSG00000147437
Progonadoliberin-1 Gonadoliberin-1 GnRH-associated peptide 1
Tissue enriched
Detected in many
brain:
42.5
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