We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
13372 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 268 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
FAM50B
ENSSSCG00000026323
ENSG00000145945
Family with sequence similarity 50 member B
Tissue enriched
Detected in single
testis:
94.1
FAM53B
ENSSSCG00000010732
ENSG00000189319
Family with sequence similarity 53 member B
Tissue enhanced
Detected in all
lymphoid tissue:
53.7
FAM57A
ENSSSCG00000017810
ENSG00000167695
Family with sequence similarity 57 member A
Tissue enhanced
Detected in all
breast:
19.9
testis:
33.0
FAM57B
ENSSSCG00000037193
ENSG00000149926
Family with sequence similarity 57 member B
Tissue enhanced
Detected in many
pineal gland:
29.6
retina:
85.0
FAM69A
ENSSSCG00000006900
ENSG00000154511
Family with sequence similarity 69 member A
Tissue enhanced
Detected in many
brain:
31.6
smooth muscle:
24.2
FAM71A
ENSSSCG00000015596
ENSG00000162771
Family with sequence similarity 71 member A
Tissue enriched
Detected in single
testis:
88.0
FAM71B
ENSSSCG00000017057
ENSG00000170613
Family with sequence similarity 71 member B
Tissue enriched
Detected in many
testis:
77.7
FAM71C
ENSSSCG00000037573
ENSG00000180219
Family with sequence similarity 71 member C
Tissue enhanced
Detected in some
brain:
19.2
choroid plexus:
4.6
pineal gland:
5.4
retina:
5.8
FAM71D
ENSSSCG00000002286
ENSG00000172717
Family with sequence similarity 71 member D
Tissue enriched
Detected in some
testis:
102.6
FAM71E1
ENSSSCG00000003219
ENSG00000142530
Family with sequence similarity 71 member E1
Tissue enriched
Detected in many
testis:
106.7
FAM71F1
ENSSSCG00000016582
ENSG00000135248
Family with sequence similarity 71 member F1
Tissue enriched
Detected in some
testis:
76.6
FAM71F2
ENSSSCG00000016583
ENSG00000205085
Family with sequence similarity 71 member F2
Tissue enriched
Detected in some
testis:
119.0
FAM78A
ENSSSCG00000028172
ENSG00000126882
Family with sequence similarity 78 member A
Tissue enhanced
Detected in many
lymphoid tissue:
47.0
skeletal muscle:
22.1
testis:
37.9
FAM78B
ENSSSCG00000006321
ENSG00000188859
Family with sequence similarity 78 member B
Tissue enhanced
Detected in many
heart:
27.4
ovary:
39.3
FAM81A
ENSSSCG00000004586
ENSG00000157470
Family with sequence similarity 81 member A
Tissue enhanced
Detected in many
brain:
28.4
FAM81B
ENSSSCG00000026175
ENSG00000153347
Family with sequence similarity 81 member B
Tissue enhanced
Detected in some
fallopian tube:
14.1
testis:
52.5
FAM83A
ENSSSCG00000005986
ENSG00000147689
Family with sequence similarity 83 member A
Tissue enriched
Detected in many
cornea:
59.3
FAM83B
ENSSSCG00000001483
ENSG00000168143
Family with sequence similarity 83 member B
Tissue enhanced
Detected in many
mouth:
25.6
skin:
36.7
FAM83C
ENSSSCG00000028858
ENSG00000125998
Family with sequence similarity 83 member C
Tissue enhanced
Detected in many
cornea:
24.1
mouth:
17.0
skin:
12.5
FAM83D
ENSSSCG00000007351
ENSG00000101447
Family with sequence similarity 83 member D
Tissue enhanced
Detected in all
smooth muscle:
55.1
FAM83E
ENSSSCG00000025975
ENSG00000105523
Family with sequence similarity 83 member E
Tissue enhanced
Detected in some
large intestine:
22.8
stomach:
63.6
FAM83F
ENSSSCG00000000079
ENSG00000133477
Family with sequence similarity 83 member F
Tissue enhanced
Detected in many
stomach:
29.6
FAM83G
ENSSSCG00000018047
ENSG00000188522
Family with sequence similarity 83 member G
Tissue enhanced
Detected in many
cornea:
18.5
lens:
26.1
FAM83H
ENSSSCG00000036964
ENSG00000180921
Family with sequence similarity 83 member H
Tissue enhanced
Detected in all
stomach:
45.1
FAM84A
ENSSSCG00000008664
ENSG00000162981
Family with sequence similarity 84 member A
Tissue enhanced
Detected in many
endometrium:
83.8
epididymis:
49.4
thyroid gland:
73.1
FAM84B
ENSSSCG00000005967
ENSG00000168672
Family with sequence similarity 84 member B
Tissue enhanced
Detected in all
male glands:
92.2
FAM89A
ENSSSCG00000038765
ENSG00000182118
Family with sequence similarity 89 member A
Tissue enhanced
Detected in many
lens:
30.4
testis:
18.6
FAM89B
ENSSSCG00000035604
ENSG00000176973
Family with sequence similarity 89 member B
Tissue enhanced
Detected in many
cartilage:
22.3
FAM92B
ENSSSCG00000002668
ENSG00000153789
Protein FAM92B
Tissue enhanced
Detected in many
fallopian tube:
20.8
lung:
16.2
upper respiratory system:
20.9
FAM96B
ENSSSCG00000033027
ENSG00000166595
Family with sequence similarity 96 member B
Tissue enhanced
Detected in all
lens:
37.5
FANCB
ENSSSCG00000012130
ENSG00000181544
Fanconi anemia complementation group B
Tissue enhanced
Detected in many
epididymis:
15.1
lymphoid tissue:
11.8
FANCD2
ENSSSCG00000011563
ENSG00000144554
Fanconi anemia complementation group D2
Tissue enhanced
Detected in many
testis:
37.0
FANCD2OS
ENSSSCG00000034155
ENSG00000163705
FANCD2 opposite strand
Tissue enriched
Detected in some
testis:
68.3
FANCI
ENSSSCG00000001837
ENSG00000140525
Fanconi anemia complementation group I
Tissue enhanced
Detected in many
lymphoid tissue:
20.6
FANK1
ENSSSCG00000010745
ENSG00000203780
Fibronectin type III and ankyrin repeat domains 1
Tissue enhanced
Detected in many
fallopian tube:
27.3
testis:
29.2
upper respiratory system:
19.1
FAP
ENSSSCG00000015896
ENSG00000078098
Fibroblast activation protein alpha
Tissue enriched
Detected in many
cartilage:
50.6
FAR1
ENSSSCG00000021170
ENSG00000197601
Fatty acyl-CoA reductase 1
Tissue enhanced
Detected in all
male glands:
76.8
FAR2
ENSSSCG00000000541
ENSG00000064763
Fatty acyl-CoA reductase 2
Tissue enhanced
Detected in all
pineal gland:
29.7
FARP2
ENSSSCG00000016368
ENSG00000006607
FERM, ARH/RhoGEF and pleckstrin domain protein 2
Tissue enhanced
Detected in all
salivary gland:
46.4
FASLG
ENSSSCG00000022226
ENSG00000117560
Tumor necrosis factor ligand superfamily member 6
Tissue enhanced
Detected in all
lymphoid tissue:
16.0
stomach:
16.2
FASN
ENSSSCG00000029944
ENSG00000169710
Fatty acid synthase
Tissue enhanced
Detected in all
adipose tissue:
297.2
aorta:
259.1
bone marrow:
111.4
FAT1
ENSSSCG00000007000
ENSG00000083857
FAT tumor suppressor homolog 1
Tissue enhanced
Detected in all
lens:
86.3
FAT2
ENSSSCG00000017084
ENSG00000086570
FAT atypical cadherin 2
Tissue enriched
Detected in many
brain:
98.8
FAT3
ENSSSCG00000014935
ENSG00000165323
FAT atypical cadherin 3
Tissue enhanced
Detected in many
brain:
18.8
dura mater:
10.3
FATE1
ENSSSCG00000039345
ENSG00000147378
Fetal and adult testis-expressed transcript protein homolog
Tissue enriched
Detected in some
testis:
55.2
FAXC
ENSSSCG00000004349
ENSG00000146267
Failed axon connections homolog
Tissue enhanced
Detected in all
brain:
33.7
FBF1
ENSSSCG00000017197
ENSG00000188878
Fas binding factor 1
Tissue enhanced
Detected in all
testis:
61.1
FBLL1
ENSSSCG00000017013
ENSG00000188573
Fibrillarin like 1
Tissue enhanced
Detected in some
brain:
16.7
pineal gland:
7.9
pituitary gland:
4.8
FBLN1
ENSSSCG00000000010
ENSG00000077942
Fibulin 1
Tissue enhanced
Detected in all
cartilage:
101.9
FBLN2
ENSSSCG00000011609
ENSG00000163520
Fibulin 2
Tissue enhanced
Detected in all
mesothelial tissue:
88.7
« prev
| Page
of 268 |
next »