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Human disease related genes
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Keyword
Chromosome
1
2
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6
7
8
9
10
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Lymphoid tissue
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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13372 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
F2RL1
ENSSSCG00000014091
ENSG00000164251
F2R like trypsin receptor 1
Tissue enhanced
Detected in many
large intestine:
23.6
F2RL2
ENSSSCG00000037582
ENSG00000164220
Coagulation factor II thrombin receptor like 2
Tissue enhanced
Detected in many
cartilage:
63.5
F2RL3
ENSSSCG00000013868
ENSG00000127533
F2R like thrombin or trypsin receptor 3
Tissue enhanced
Detected in some
cartilage:
5.9
cervix:
3.2
lymphoid tissue:
5.2
F3
ENSSSCG00000022447
ENSG00000117525
Tissue factor
Tissue enhanced
Detected in all
cornea:
64.5
ovary:
111.0
upper respiratory system:
53.4
F5
ENSSSCG00000006289
ENSG00000198734
Coagulation factor V precursor
Tissue enhanced
Detected in many
brain:
29.6
liver:
63.5
salivary gland:
23.0
upper respiratory system:
23.6
F7
ENSSSCG00000029503
ENSG00000057593
Coagulation factor VII precursor
Tissue enriched
Detected in many
liver:
44.1
F8
ENSSSCG00000012818
ENSG00000185010
Coagulation factor VIII precursor
Tissue enhanced
Detected in many
penis:
47.6
F9
ENSSSCG00000012711
ENSG00000101981
Coagulation factor IX
Tissue enriched
Detected in some
liver:
146.3
FA2H
ENSSSCG00000002718
ENSG00000103089
Fatty acid 2-hydroxylase
Tissue enhanced
Detected in many
brain:
85.7
vagus nerve:
56.0
FAAH
ENSSSCG00000003901
ENSG00000117480
Fatty-acid amide hydrolase 1
Tissue enhanced
Detected in many
choroid plexus:
31.3
FABP1
ENSSSCG00000008214
ENSG00000163586
Fatty acid-binding protein, liver
Group enriched
Detected in some
large intestine:
142.2
liver:
42.4
small intestine:
42.3
FABP2
ENSSSCG00000037272
ENSG00000145384
Fatty acid-binding protein, intestinal
Tissue enhanced
Detected in all
small intestine:
31.2
FABP3
ENSSSCG00000036883
ENSG00000121769
Fatty acid-binding protein, heart
Tissue enhanced
Detected in many
heart:
63.9
skeletal muscle:
53.6
FABP4
ENSSSCG00000040681
ENSG00000170323
Fatty acid-binding protein, adipocyte
Tissue enhanced
Detected in many
adipose tissue:
239.6
aorta:
112.0
bone marrow:
191.5
FABP5
ENSSSCG00000006153
ENSG00000164687
Fatty acid-binding protein, epidermal
Tissue enriched
Detected in many
lens:
391.5
FABP6
ENSSSCG00000017037
ENSG00000170231
Gastrotropin
Tissue enriched
Detected in some
small intestine:
511.8
FABP7
ENSSSCG00000004234
ENSG00000164434
Fatty acid-binding protein, brain
Group enriched
Detected in some
brain:
67.6
pineal gland:
37.3
FABP9
ENSSSCG00000033728
ENSG00000205186
Fatty acid binding protein 9
Group enriched
Detected in some
choroid plexus:
25.1
skin:
78.7
FADS2
ENSSSCG00000013072
ENSG00000134824
Fatty acid desaturase 2
Tissue enhanced
Detected in all
adrenal gland:
119.4
brain:
87.0
FADS3
ENSSSCG00000013073
ENSG00000221968
Fatty acid desaturase 3
Tissue enhanced
Detected in many
lymphoid tissue:
79.8
FADS6
ENSSSCG00000017226
ENSG00000172782
Fatty acid desaturase 6
Tissue enhanced
Detected in many
epididymis:
47.3
liver:
40.5
FAH
ENSSSCG00000001780
ENSG00000103876
Fumarylacetoacetate hydrolase
Tissue enhanced
Detected in many
adrenal gland:
53.6
liver:
74.4
FAHD1
ENSSSCG00000039715
ENSG00000180185
Fumarylacetoacetate hydrolase domain containing 1
Tissue enhanced
Detected in all
lens:
57.6
FAIM
ENSSSCG00000023814
ENSG00000158234
Fas apoptotic inhibitory molecule 1
Tissue enhanced
Detected in all
retina:
52.1
FAIM2
ENSSSCG00000000206
ENSG00000135472
Fas apoptotic inhibitory molecule 2
Tissue enhanced
Detected in many
brain:
65.4
pineal gland:
35.4
retina:
35.6
FAM102A
ENSSSCG00000005631
ENSG00000167106
Family with sequence similarity 102 member A
Tissue enhanced
Detected in all
stomach:
91.3
FAM103A1
ENSSSCG00000038630
ENSG00000169612
Family with sequence similarity 103 member A1
Tissue enhanced
Detected in all
lens:
50.4
FAM104A
ENSSSCG00000031686
ENSG00000133193
Family with sequence similarity 104 member A
Tissue enriched
Detected in all
testis:
75.5
FAM105A
ENSSSCG00000016782
ENSG00000145569
Family with sequence similarity 105 member A
Tissue enhanced
Detected in many
epididymis:
59.1
FAM107A
ENSSSCG00000033189
ENSG00000168309
Protein FAM107A
Tissue enhanced
Detected in all
choroid plexus:
97.7
FAM109A
ENSSSCG00000009832
ENSG00000198324
Family with sequence similarity 109 member A
Tissue enhanced
Detected in all
ovary:
32.3
FAM110A
ENSSSCG00000007200
ENSG00000125898
Family with sequence similarity 110 member A
Tissue enhanced
Detected in many
cornea:
26.5
FAM110B
ENSSSCG00000006240
ENSG00000169122
Family with sequence similarity 110 member B
Tissue enriched
Detected in many
cartilage:
120.4
FAM110C
ENSSSCG00000032221
ENSG00000184731
Family with sequence similarity 110 member C
Tissue enhanced
Detected in many
male glands:
34.8
FAM110D
ENSSSCG00000031074
ENSG00000197245
Protein FAM110D isoform 1
Tissue enhanced
Detected in many
mesothelial tissue:
39.4
FAM114A1
ENSSSCG00000008785
ENSG00000197712
Family with sequence similarity 114 member A1
Tissue enhanced
Detected in all
male glands:
109.8
FAM124A
ENSSSCG00000029598
ENSG00000150510
Family with sequence similarity 124 member A
Tissue enhanced
Detected in all
lens:
40.0
FAM126B
ENSSSCG00000036339
ENSG00000155744
Family with sequence similarity 126 member B
Tissue enhanced
Detected in all
brain:
41.8
FAM129A
ENSSSCG00000015567
ENSG00000135842
Protein Niban
Tissue enhanced
Detected in many
male glands:
84.4
salivary gland:
83.6
smooth muscle:
60.1
FAM131A
ENSSSCG00000028372
ENSG00000175182
Protein FAM131A
Tissue enriched
Detected in many
brain:
35.6
FAM131B
ENSSSCG00000028274
ENSG00000159784
Family with sequence similarity 131 member B
Tissue enriched
Detected in some
brain:
28.3
FAM131C
ENSSSCG00000003470
ENSG00000185519
Family with sequence similarity 131 member C
Tissue enhanced
Detected in all
stomach:
49.5
FAM133A
ENSSSCG00000031033
ENSG00000179083
Family with sequence similarity 133 member A
Tissue enhanced
Detected in many
brain:
14.6
pituitary gland:
13.3
FAM135B
ENSSSCG00000005939
ENSG00000147724
Family with sequence similarity 135 member B
Group enriched
Detected in some
brain:
21.0
pineal gland:
14.7
retina:
7.1
FAM149A
ENSSSCG00000015802
ENSG00000109794
Family with sequence similarity 149 member A
Tissue enriched
Detected in many
lens:
125.8
FAM151A
ENSSSCG00000036649
ENSG00000162391
Family with sequence similarity 151 member A
Tissue enriched
Detected in some
kidney:
50.8
FAM155B
ENSSSCG00000012386
ENSG00000130054
Family with sequence similarity 155 member B
Tissue enhanced
Detected in all
heart:
38.3
FAM161A
ENSSSCG00000008378
ENSG00000170264
Family with sequence similarity 161 member A
Tissue enhanced
Detected in all
testis:
68.3
FAM161B
ENSSSCG00000002353
ENSG00000156050
Family with sequence similarity 161 member B
Tissue enhanced
Detected in all
lens:
45.4
FAM162A
ENSSSCG00000026990
ENSG00000114023
Protein FAM162A
Tissue enhanced
Detected in all
skeletal muscle:
58.8
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