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Human disease related genes
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Keyword
Chromosome
1
2
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6
7
8
9
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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13372 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
CPB2
ENSSSCG00000009413
ENSG00000080618
Carboxypeptidase B2
Tissue enriched
Detected in some
liver:
136.6
CPD
ENSSSCG00000017799
ENSG00000108582
Carboxypeptidase D
Tissue enhanced
Detected in all
male glands:
86.0
CPE
ENSSSCG00000008854
ENSG00000109472
Carboxypeptidase E precursor
Tissue enhanced
Detected in many
brain:
78.2
pineal gland:
88.9
pituitary gland:
38.4
CPEB1
ENSSSCG00000001808
Cytoplasmic polyadenylation element-binding protein 1
Tissue enriched
Detected in many
lens:
70.9
CPEB2
ENSSSCG00000038410
ENSG00000137449
Cytoplasmic polyadenylation element-binding protein 2
Tissue enhanced
Detected in all
testis:
57.4
CPEB3
ENSSSCG00000010468
ENSG00000107864
Cytoplasmic polyadenylation element binding protein 3
Tissue enhanced
Detected in all
salivary gland:
51.1
CPEB4
ENSSSCG00000016981
ENSG00000113742
Cytoplasmic polyadenylation element binding protein 4
Tissue enhanced
Detected in all
kidney:
103.8
lens:
104.0
CPLX1
ENSSSCG00000037527
ENSG00000168993
Complexin 1
Tissue enhanced
Detected in some
brain:
72.4
kidney:
15.6
retina:
24.1
CPLX2
ENSSSCG00000033682
ENSG00000145920
Complexin 2
Tissue enriched
Detected in some
brain:
95.7
CPLX3
ENSSSCG00000001895
ENSG00000213578
Complexin 3
Tissue enriched
Detected in some
retina:
81.8
CPLX4
ENSSSCG00000004909
ENSG00000166569
Complexin 4
Group enriched
Detected in some
pineal gland:
120.0
retina:
127.0
CPN1
ENSSSCG00000010545
ENSG00000120054
Carboxypeptidase N subunit 1
Tissue enhanced
Detected in all
cartilage:
64.6
liver:
42.0
CPN2
ENSSSCG00000025128
ENSG00000178772
Carboxypeptidase N subunit 2
Group enriched
Detected in some
adrenal gland:
19.1
liver:
37.0
testis:
11.5
CPNE2
ENSSSCG00000021519
ENSG00000140848
Copine 2
Tissue enhanced
Detected in many
brain:
40.7
choroid plexus:
38.0
CPNE5
ENSSSCG00000001567
ENSG00000124772
Copine 5
Tissue enriched
Detected in some
brain:
65.8
CPNE6
ENSSSCG00000002011
ENSG00000100884
Copine 6
Tissue enriched
Detected in some
brain:
76.3
CPNE8
ENSSSCG00000000778
ENSG00000139117
Copine 8
Tissue enhanced
Detected in many
cartilage:
20.5
CPO
ENSSSCG00000016135
ENSG00000144410
Carboxypeptidase O
Tissue enriched
Detected in many
small intestine:
23.6
CPOX
ENSSSCG00000011978
ENSG00000080819
Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial
Tissue enhanced
Detected in all
liver:
32.0
CPQ
ENSSSCG00000006087
ENSG00000104324
Carboxypeptidase Q precursor
Tissue enhanced
Detected in all
thyroid gland:
65.0
CPS1
ENSSSCG00000016159
ENSG00000021826
Carbamoyl-phosphate synthase 1
Tissue enriched
Detected in some
liver:
151.7
CPSF4L
ENSSSCG00000040611
ENSG00000187959
Cleavage and polyadenylation specific factor 4 like
Tissue enhanced
Detected in many
male glands:
23.9
retina:
20.1
salivary gland:
18.8
CPT1B
ENSSSCG00000022364
ENSG00000205560
Carnitine O-palmitoyltransferase 1, muscle isoform
Tissue enhanced
Detected in many
heart:
80.4
skeletal muscle:
38.4
CPT1C
ENSSSCG00000024872
ENSG00000169169
Carnitine palmitoyltransferase 1C
Tissue enhanced
Detected in many
brain:
21.3
pineal gland:
14.5
CPVL
ENSSSCG00000016688
ENSG00000106066
Carboxypeptidase, vitellogenic like
Tissue enhanced
Detected in many
male glands:
19.8
thyroid gland:
64.3
CPXM1
ENSSSCG00000007170
ENSG00000088882
Carboxypeptidase X, M14 family member 1
Tissue enhanced
Detected in many
cartilage:
29.8
CPXM2
ENSSSCG00000010728
ENSG00000121898
Carboxypeptidase X, M14 family member 2
Tissue enhanced
Detected in all
cornea:
87.2
CPZ
ENSSSCG00000032151
ENSG00000109625
Carboxypeptidase Z
Tissue enhanced
Detected in many
cartilage:
27.7
skin:
25.7
CR2
ENSSSCG00000028674
ENSG00000117322
Complement C3d receptor 2
Group enriched
Detected in some
lymphoid tissue:
90.2
small intestine:
27.8
synovial tissue:
93.4
upper respiratory system:
29.5
CRABP1
ENSSSCG00000021873
ENSG00000166426
Cellular retinoic acid-binding protein 1
Tissue enriched
Detected in many
pineal gland:
321.9
CRABP2
ENSSSCG00000006472
ENSG00000143320
Cellular retinoic acid-binding protein 2
Tissue enhanced
Detected in many
brain:
53.9
cartilage:
35.4
mouth:
67.3
CRACR2A
ENSSSCG00000000732
ENSG00000130038
Calcium release activated channel regulator 2A
Tissue enhanced
Detected in many
esophagus:
24.5
large intestine:
26.3
male glands:
37.7
salivary gland:
48.2
stomach:
23.2
CRACR2B
ENSSSCG00000023933
ENSG00000177685
EF-hand calcium-binding domain-containing protein 4A
Tissue enhanced
Detected in many
male glands:
58.9
salivary gland:
73.0
CRAT
ENSSSCG00000005671
ENSG00000095321
Carnitine O-acetyltransferase
Tissue enhanced
Detected in all
skeletal muscle:
122.7
CRB1
ENSSSCG00000021897
ENSG00000134376
Crumbs 1, cell polarity complex component
Tissue enriched
Detected in some
retina:
41.3
CRB2
ENSSSCG00000005584
ENSG00000148204
Crumbs 2, cell polarity complex component
Tissue enhanced
Detected in some
adipose tissue:
22.8
cornea:
11.4
mesothelial tissue:
22.3
CRB3
ENSSSCG00000013547
ENSG00000130545
Crumbs 3, cell polarity complex component
Tissue enhanced
Detected in many
large intestine:
8.2
male glands:
11.3
stomach:
9.7
CRBN
ENSSSCG00000011530
ENSG00000113851
Cereblon
Tissue enhanced
Detected in all
lens:
55.5
CREB3
ENSSSCG00000005318
ENSG00000107175
Cyclic AMP-responsive element-binding protein 3
Tissue enriched
Detected in all
male glands:
104.0
CREB3L1
ENSSSCG00000013263
ENSG00000157613
CAMP responsive element binding protein 3 like 1
Tissue enhanced
Detected in all
esophagus:
81.9
male glands:
132.0
salivary gland:
90.7
stomach:
87.6
CREB3L2
ENSSSCG00000016520
ENSG00000182158
CAMP responsive element binding protein 3 like 2
Tissue enhanced
Detected in all
cartilage:
77.8
CREB3L3
ENSSSCG00000013501
ENSG00000060566
CAMP responsive element binding protein 3 like 3
Tissue enriched
Detected in some
liver:
84.3
CREB3L4
ENSSSCG00000006560
ENSG00000143578
Cyclic AMP-responsive element-binding protein 3-like protein 4
Tissue enhanced
Detected in all
male glands:
52.6
CREB5
ENSSSCG00000016690
ENSG00000146592
CAMP responsive element binding protein 5
Tissue enhanced
Detected in many
cartilage:
153.5
synovial tissue:
46.5
CREG1
ENSSSCG00000006308
ENSG00000143162
Cellular repressor of E1A stimulated genes 1
Tissue enhanced
Detected in all
male glands:
80.5
testis:
86.7
CREG2
ENSSSCG00000008166
ENSG00000175874
Cellular repressor of E1A stimulated genes 2
Tissue enhanced
Detected in some
brain:
13.7
pineal gland:
2.5
pituitary gland:
3.5
CRELD2
ENSSSCG00000000981
ENSG00000184164
Cysteine rich with EGF like domains 2
Tissue enhanced
Detected in many
epididymis:
37.6
CREM
ENSSSCG00000011106
ENSG00000095794
CAMP responsive element modulator
Tissue enriched
Detected in all
testis:
83.2
CRH
ENSSSCG00000006215
ENSG00000147571
Corticoliberin
Tissue enhanced
Detected in some
brain:
24.8
heart:
8.9
lens:
7.5
CRHBP
ENSSSCG00000014093
ENSG00000145708
Corticotropin-releasing factor-binding protein precursor
Tissue enriched
Detected in all
brain:
22.3
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