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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Cancers
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Other diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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13372 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
BRI3BP
ENSSSCG00000032831
ENSG00000184992
BRI3 binding protein
Tissue enhanced
Detected in all
large intestine:
36.4
BRICD5
ENSSSCG00000008045
ENSG00000182685
BRICHOS domain containing 5
Tissue enriched
Detected in some
salivary gland:
25.5
BRINP1
ENSSSCG00000005504
ENSG00000078725
BMP/retinoic acid-inducible neural-specific protein 1 precursor
Tissue enriched
Detected in many
brain:
39.1
BRINP2
ENSSSCG00000015515
ENSG00000198797
BMP/retinoic acid inducible neural specific 2
Group enriched
Detected in some
brain:
23.6
pineal gland:
6.3
BRINP3
ENSSSCG00000010809
ENSG00000162670
BMP/retinoic acid inducible neural specific 3
Tissue enhanced
Detected in some
brain:
26.7
ductus deferens:
10.9
BRSK1
ENSSSCG00000032656
ENSG00000160469
BR serine/threonine kinase 1
Tissue enhanced
Detected in many
brain:
34.5
BRSK2
ENSSSCG00000037337
ENSG00000174672
BR serine/threonine kinase 2
Tissue enhanced
Detected in some
brain:
26.5
retina:
17.2
BRWD1
ENSSSCG00000021042
ENSG00000185658
Proteasome assembly chaperone 1
Tissue enhanced
Detected in all
lens:
98.6
BSCL2
ENSSSCG00000020823
ENSG00000168000
Seipin isoform 1
Tissue enhanced
Detected in all
testis:
129.5
BSN
ENSSSCG00000011384
ENSG00000164061
Bassoon presynaptic cytomatrix protein
Tissue enriched
Detected in many
brain:
35.8
BSND
ENSSSCG00000020989
ENSG00000162399
Barttin CLCNK type accessory beta subunit
Tissue enriched
Detected in some
kidney:
43.8
BSP1
ENSSSCG00000003053
Seminal plasma protein pB1 precursor
Tissue enriched
Detected in some
male glands:
499.5
BSPH1
ENSSSCG00000003123
ENSG00000188334
Binder of sperm protein homolog 1
Tissue enriched
Detected in some
epididymis:
66.6
BSPRY
ENSSSCG00000021173
ENSG00000119411
B-box and SPRY domain containing
Tissue enhanced
Detected in many
large intestine:
20.8
testis:
29.4
BST2
ENSSSCG00000033453
ENSG00000130303
Bone marrow stromal antigen 2
Tissue enhanced
Detected in many
lymphoid tissue:
32.5
BSX
ENSSSCG00000015139
ENSG00000188909
Brain specific homeobox
Tissue enriched
Detected in some
pineal gland:
49.8
BTBD1
ENSSSCG00000001801
ENSG00000064726
BTB domain containing 1
Tissue enhanced
Detected in all
heart:
54.2
skeletal muscle:
59.2
BTBD11
ENSSSCG00000000162
ENSG00000151136
BTB domain containing 11
Tissue enhanced
Detected in many
skin:
28.9
BTBD16
ENSSSCG00000010701
ENSG00000138152
BTB domain containing 16
Tissue enriched
Detected in single
testis:
48.7
BTBD17
ENSSSCG00000026789
ENSG00000204347
BTB domain containing 17
Tissue enriched
Detected in some
brain:
24.9
BTBD3
ENSSSCG00000020853
ENSG00000132640
BTB domain containing 3
Tissue enhanced
Detected in all
brain:
64.1
BTBD6
ENSSSCG00000035555
ENSG00000184887
BTB domain containing 6
Tissue enhanced
Detected in all
lens:
63.4
skeletal muscle:
66.5
BTBD8
ENSSSCG00000035196
ENSG00000189195
BTB domain containing 8
Tissue enhanced
Detected in all
brain:
26.7
pineal gland:
66.6
BTG4
ENSSSCG00000015020
ENSG00000137707
BTG anti-proliferation factor 4
Tissue enhanced
Detected in some
choroid plexus:
7.3
fallopian tube:
15.4
lung:
6.3
lymphoid tissue:
6.2
upper respiratory system:
8.6
BTK
ENSSSCG00000026742
ENSG00000010671
Tyrosine-protein kinase BTK
Tissue enhanced
Detected in many
lymphoid tissue:
33.5
upper respiratory system:
17.9
BTNL2
ENSSSCG00000025071
ENSG00000204290
Butyrophilin like 2
Tissue enriched
Detected in some
small intestine:
46.2
BUB1B
ENSSSCG00000004782
ENSG00000156970
BUB1 mitotic checkpoint serine/threonine kinase B
Tissue enhanced
Detected in many
lymphoid tissue:
29.6
testis:
17.7
BUD23
ENSSSCG00000007713
ENSG00000071462
BUD23, rRNA methyltransferase and ribosome maturation factor
Tissue enhanced
Detected in all
lens:
71.2
BVES
ENSSSCG00000004366
ENSG00000112276
Blood vessel epicardial substance
Tissue enhanced
Detected in many
heart:
27.4
male glands:
20.3
skeletal muscle:
28.5
smooth muscle:
22.7
BZW2
ENSSSCG00000023118
ENSG00000136261
Basic leucine zipper and W2 domain-containing protein 2
Tissue enhanced
Detected in all
heart:
53.5
skeletal muscle:
61.8
C10orf105
ENSSSCG00000038545
ENSG00000214688
Chromosome 10 open reading frame 105
Group enriched
Detected in some
brain:
17.0
cartilage:
9.4
synovial tissue:
16.6
C10orf71
ENSSSCG00000033489
ENSG00000177354
Chromosome 10 open reading frame 71
Group enriched
Detected in some
heart:
41.6
skeletal muscle:
112.6
C10orf90
ENSSSCG00000010747
ENSG00000154493
Chromosome 10 open reading frame 90
Tissue enhanced
Detected in some
brain:
39.2
skin:
14.2
testis:
35.6
C11orf42
ENSSSCG00000014634
ENSG00000180878
Chromosome 11 open reading frame 42
Tissue enriched
Detected in many
testis:
79.1
C11orf49
ENSSSCG00000013246
ENSG00000149179
UPF0705 protein C11orf49 homolog
Tissue enhanced
Detected in many
brain:
19.7
pineal gland:
15.8
testis:
20.2
C11orf53
ENSSSCG00000015018
ENSG00000150750
Chromosome 11 open reading frame 53
Tissue enhanced
Detected in many
stomach:
10.8
upper respiratory system:
18.7
C11orf70
ENSSSCG00000014980
ENSG00000137691
Chromosome 11 open reading frame 70
Tissue enhanced
Detected in many
choroid plexus:
29.2
kidney:
27.5
testis:
45.1
C11orf71
ENSSSCG00000036867
ENSG00000180425
Chromosome 11 open reading frame 71
Tissue enriched
Detected in some
testis:
227.2
C11orf86
ENSSSCG00000040729
ENSG00000173237
Chromosome 11 open reading frame 86
Group enriched
Detected in some
large intestine:
41.5
small intestine:
30.0
C11orf87
ENSSSCG00000036943
ENSG00000185742
Chromosome 11 open reading frame 87
Tissue enriched
Detected in some
brain:
39.4
C11orf88
ENSSSCG00000015021
ENSG00000183644
Chromosome 11 open reading frame 88
Tissue enhanced
Detected in some
choroid plexus:
19.9
fallopian tube:
35.8
lung:
16.1
testis:
25.1
upper respiratory system:
28.2
C11orf91
ENSSSCG00000013310
ENSG00000205177
Chromosome 11 open reading frame 91
Tissue enriched
Detected in many
testis:
41.6
C11orf96
ENSSSCG00000039182
ENSG00000187479
Chromosome 11 open reading frame 96
Tissue enhanced
Detected in many
aorta:
137.7
gallbladder:
125.2
C12orf29
ENSSSCG00000000925
ENSG00000133641
Uncharacterized protein C12orf29 homolog
Tissue enhanced
Detected in all
lens:
32.6
C12orf50
ENSSSCG00000000924
ENSG00000165805
Chromosome 12 open reading frame 50
Tissue enriched
Detected in single
testis:
106.5
C12orf56
ENSSSCG00000000464
ENSG00000185306
Chromosome 12 open reading frame 56
Tissue enhanced
Detected in many
esophagus:
8.9
male glands:
13.8
C14H10orf120
ENSSSCG00000010717
ENSG00000183559
Uncharacterized protein C10orf120 homolog
Tissue enriched
Detected in single
testis:
48.3
C14orf132
ENSSSCG00000033807
ENSG00000227051
Chromosome 14 open reading frame 132
Tissue enhanced
Detected in many
brain:
36.9
C14orf37
ENSSSCG00000005071
ENSG00000139971
Chromosome 14 open reading frame 37
Tissue enriched
Detected in many
pineal gland:
113.7
C14orf39
ENSSSCG00000005085
ENSG00000179008
Chromosome 14 open reading frame 39
Tissue enhanced
Detected in many
pituitary gland:
21.8
retina:
16.6
testis:
14.7
thyroid gland:
67.1
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