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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Keyword
Chromosome
1
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9
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15143 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ZKSCAN1
ENSSSCG00000031461
ENSG00000106261
Zinc finger with KRAB and SCAN domains 1
Tissue enhanced
Detected in all
cartilage:
82.8
salivary gland:
59.8
ZKSCAN2
ENSSSCG00000007823
ENSG00000155592
Zinc finger with KRAB and SCAN domains 2
Tissue enhanced
Detected in many
retina:
16.3
ZKSCAN8
ENSSSCG00000001201
ENSG00000198315
Zinc finger with KRAB and SCAN domains 8
Low tissue specificity
Detected in all
ZMAT1
ENSSSCG00000012512
ENSG00000166432
Zinc finger matrin-type 1
Tissue enhanced
Detected in many
ductus deferens:
34.0
epididymis:
30.3
ZMAT2
ENSSSCG00000029158
ENSG00000146007
Zinc finger matrin-type 2
Low tissue specificity
Detected in all
ZMAT3
ENSSSCG00000033860
ENSG00000172667
Zinc finger matrin-type 3
Tissue enhanced
Detected in all
brain:
28.4
ZMAT5
ENSSSCG00000024279
ENSG00000100319
Zinc finger matrin-type 5
Low tissue specificity
Detected in all
ZMIZ1
ENSSSCG00000010329
ENSG00000108175
Zinc finger MIZ-type containing 1
Low tissue specificity
Detected in all
ZMPSTE24
ENSSSCG00000027902
ENSG00000084073
Zinc metallopeptidase STE24
Low tissue specificity
Detected in all
ZMYM1
ENSSSCG00000034292
ENSG00000197056
Zinc finger MYM-type containing 1
Low tissue specificity
Detected in all
ZMYM2
ENSSSCG00000021814
ENSG00000121741
Zinc finger MYM-type containing 2
Low tissue specificity
Detected in all
ZMYM4
ENSSSCG00000003627
ENSG00000146463
Zinc finger MYM-type containing 4
Low tissue specificity
Detected in all
ZMYND11
ENSSSCG00000011166
ENSG00000015171
Zinc finger MYND-type containing 11
Low tissue specificity
Detected in all
ZMYND19
ENSSSCG00000039592
ENSG00000165724
Zinc finger MYND-type containing 19
Low tissue specificity
Detected in all
ZNF10
ENSSSCG00000033616
ENSG00000256223
Zinc finger protein 10
Low tissue specificity
Detected in all
ZNF106
ENSSSCG00000004725
ENSG00000103994
Zinc finger protein 106
Group enriched
Detected in all
heart:
118.8
lens:
48.1
skeletal muscle:
102.3
ZNF112
ENSSSCG00000003077
ENSG00000062370
Zinc finger protein 112
Low tissue specificity
Detected in all
ZNF12
ENSSSCG00000034517
ENSG00000164631
Zinc finger protein 12
Low tissue specificity
Detected in all
ZNF131
ENSSSCG00000040959
ENSG00000172262
Zinc finger protein 131
Low tissue specificity
Detected in all
ZNF132
ENSSSCG00000027987
ENSG00000131849
Zinc finger protein 132
Tissue enhanced
Detected in all
epididymis:
23.7
ZNF133
ENSSSCG00000007093
ENSG00000125846
Zinc finger protein 133
Low tissue specificity
Detected in all
ZNF134
ENSSSCG00000003984
ENSG00000213762
Zinc finger protein 134
Low tissue specificity
Detected in all
ZNF135
ENSSSCG00000021888
ENSG00000176293
Zinc finger protein 135
Low tissue specificity
Detected in all
ZNF140
ENSSSCG00000032144
ENSG00000196387
Zinc finger protein 140
Low tissue specificity
Detected in all
ZNF142
ENSSSCG00000016191
ENSG00000115568
Zinc finger protein 142
Low tissue specificity
Detected in all
ZNF143
ENSSSCG00000022070
ENSG00000166478
Zinc finger protein 143
Low tissue specificity
Detected in all
ZNF146
ENSSSCG00000025355
ENSG00000167635
Zinc finger protein 146
Low tissue specificity
Detected in all
ZNF148
ENSSSCG00000011858
ENSG00000163848
Zinc finger protein 148
Low tissue specificity
Detected in all
ZNF16
ENSSSCG00000034031
ENSG00000170631
Zinc finger protein 16
Low tissue specificity
Detected in all
ZNF165
ENSSSCG00000001197
ENSG00000197279
Zinc finger protein 165
Low tissue specificity
Detected in all
ZNF169
ENSSSCG00000032834
ENSG00000175787
Zinc finger protein 169
Low tissue specificity
Detected in all
ZNF174
ENSSSCG00000007958
ENSG00000103343
Zinc finger protein 174
Low tissue specificity
Detected in all
ZNF175
ENSSSCG00000003233
ENSG00000105497
Zinc finger protein 175
Low tissue specificity
Detected in all
ZNF18
ENSSSCG00000018014
ENSG00000154957
Zinc finger protein 18
Low tissue specificity
Detected in all
ZNF182
ENSSSCG00000012284
ENSG00000147118
Zinc finger protein 182
Low tissue specificity
Detected in all
ZNF184
ENSSSCG00000001164
ENSG00000096654
Zinc finger protein 184
Low tissue specificity
Detected in all
ZNF185
ENSSSCG00000012759
ENSG00000147394
Zinc finger protein 185 with LIM domain
Tissue enhanced
Detected in many
epididymis:
65.9
ZNF189
ENSSSCG00000034239
ENSG00000136870
Zinc finger protein 189
Tissue enhanced
Detected in all
brain:
34.1
ZNF19
ENSSSCG00000021770
ENSG00000157429
Zinc finger protein 19
Low tissue specificity
Detected in all
ZNF197
ENSSSCG00000011304
ENSG00000186448
Zinc finger protein 197
Low tissue specificity
Detected in all
ZNF2
ENSSSCG00000008117
ENSG00000275111
Zinc finger protein 2
Low tissue specificity
Detected in all
ZNF200
ENSSSCG00000007965
ENSG00000010539
Zinc finger protein 200
Low tissue specificity
Detected in all
ZNF202
ENSSSCG00000015145
ENSG00000166261
Zinc finger protein 202
Low tissue specificity
Detected in all
ZNF205
ENSSSCG00000029375
ENSG00000122386
Zinc finger protein 205
Low tissue specificity
Detected in all
ZNF207
ENSSSCG00000017732
ENSG00000010244
Zinc finger protein 207
Low tissue specificity
Detected in all
ZNF213
ENSSSCG00000007967
ENSG00000085644
Zinc finger protein 213
Low tissue specificity
Detected in all
ZNF217
ENSSSCG00000007484
ENSG00000171940
Zinc finger protein 217
Low tissue specificity
Detected in many
ZNF219
ENSSSCG00000038313
ENSG00000165804
Zinc finger protein 219
Low tissue specificity
Detected in all
ZNF227
ENSSSCG00000033420
ENSG00000131115
Zinc finger protein 227
Low tissue specificity
Detected in all
ZNF23
ENSSSCG00000002738
ENSG00000167377
Zinc finger protein 23
Low tissue specificity
Detected in all
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