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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Keyword
Chromosome
1
2
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7
8
9
10
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15143 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ZDHHC4
ENSSSCG00000039719
ENSG00000136247
Zinc finger DHHC-type containing 4
Low tissue specificity
Detected in all
ZDHHC5
ENSSSCG00000013178
ENSG00000156599
Zinc finger DHHC-type containing 5
Low tissue specificity
Detected in all
ZDHHC6
ENSSSCG00000010635
ENSG00000023041
Zinc finger DHHC-type containing 6
Tissue enhanced
Detected in all
male glands:
53.8
ZDHHC7
ENSSSCG00000002667
ENSG00000153786
Zinc finger DHHC-type containing 7
Low tissue specificity
Detected in all
ZDHHC8
ENSSSCG00000010138
ENSG00000099904
Zinc finger DHHC-type containing 8
Low tissue specificity
Detected in all
ZDHHC9
ENSSSCG00000012653
ENSG00000188706
Zinc finger DHHC-type containing 9
Tissue enhanced
Detected in all
brain:
74.7
ZEB1
ENSSSCG00000011025
ENSG00000148516
Zinc finger E-box binding homeobox 1
Low tissue specificity
Detected in all
ZEB2
ENSSSCG00000021343
ENSG00000169554
Zinc finger E-box binding homeobox 2
Tissue enhanced
Detected in all
brain:
105.4
ZER1
ENSSSCG00000005659
ENSG00000160445
Protein zer-1 homolog
Low tissue specificity
Detected in all
ZFAND1
ENSSSCG00000024780
ENSG00000104231
Zinc finger AN1-type containing 1
Low tissue specificity
Detected in all
ZFAND2A
ENSSSCG00000007554
ENSG00000178381
Zinc finger AN1-type containing 2A
Low tissue specificity
Detected in all
ZFAND2B
ENSSSCG00000016208
ENSG00000158552
Zinc finger AN1-type containing 2B
Low tissue specificity
Detected in all
ZFAND3
ENSSSCG00000039952
ENSG00000156639
Zinc finger AN1-type containing 3
Low tissue specificity
Detected in all
ZFAND5
ENSSSCG00000030268
ENSG00000107372
AN1-type zinc finger protein 5
Tissue enhanced
Detected in all
skeletal muscle:
113.3
ZFAT
ENSSSCG00000030947
ENSG00000066827
Zinc finger and AT-hook domain containing
Low tissue specificity
Detected in all
ZFC3H1
ENSSSCG00000000509
ENSG00000133858
Zinc finger C3H1-type containing
Low tissue specificity
Detected in all
ZFHX2
ENSSSCG00000040339
ENSG00000136367
Zinc finger homeobox 2
Low tissue specificity
Detected in many
ZFHX3
ENSSSCG00000002752
ENSG00000140836
Zinc finger homeobox 3
Low tissue specificity
Detected in all
ZFHX4
ENSSSCG00000006169
ENSG00000091656
Zinc finger homeobox 4
Low tissue specificity
Detected in many
ZFP1
ENSSSCG00000022668
ENSG00000184517
ZFP1 zinc finger protein
Low tissue specificity
Detected in all
ZFP14
ENSSSCG00000032673
ENSG00000142065
ZFP14 zinc finger protein
Low tissue specificity
Detected in all
ZFP2
ENSSSCG00000029380
ENSG00000198939
ZFP2 zinc finger protein
Low tissue specificity
Detected in all
ZFP28
ENSSSCG00000027774
ENSG00000196867
ZFP28 zinc finger protein
Low tissue specificity
Detected in all
ZFP30
ENSSSCG00000029408
ENSG00000120784
ZFP30 zinc finger protein
Low tissue specificity
Detected in all
ZFP36
ENSSSCG00000028056
ENSG00000128016
Tristetraprolin
Tissue enhanced
Detected in many
aorta:
143.1
ZFP36L1
ENSSSCG00000028304
ENSG00000185650
ZFP36 ring finger protein like 1
Low tissue specificity
Detected in many
ZFP36L2
ENSSSCG00000038549
ENSG00000152518
ZFP36 ring finger protein like 2
Low tissue specificity
Detected in all
ZFP62
ENSSSCG00000014539
ENSG00000196670
ZFP62 zinc finger protein
Low tissue specificity
Detected in all
ZFP64
ENSSSCG00000007481
ENSG00000020256
Zinc finger protein 64
Low tissue specificity
Detected in all
ZFP69B
ENSSSCG00000003981
ENSG00000187801
ZFP69 zinc finger protein B
Tissue enhanced
Detected in all
lens:
55.9
ZFP82
ENSSSCG00000031915
ENSG00000181007
ZFP82 zinc finger protein
Low tissue specificity
Detected in all
ZFP90
ENSSSCG00000032372
ENSG00000184939
ZFP90 zinc finger protein
Low tissue specificity
Detected in all
ZFP92
ENSSSCG00000012768
ENSG00000189420
ZFP92 zinc finger protein
Tissue enhanced
Detected in many
choroid plexus:
26.8
ZFPL1
ENSSSCG00000013007
ENSG00000162300
Zinc finger protein like 1
Low tissue specificity
Detected in all
ZFPM1
ENSSSCG00000040875
ENSG00000179588
Zinc finger protein, FOG family member 1
Tissue enhanced
Detected in many
gallbladder:
33.0
liver:
31.7
stomach:
72.9
ZFPM2
ENSSSCG00000006038
ENSG00000169946
Zinc finger protein ZFPM2
Tissue enhanced
Detected in many
brain:
34.8
mesothelial tissue:
30.7
ZFR
ENSSSCG00000027681
ENSG00000056097
Zinc finger RNA binding protein
Low tissue specificity
Detected in all
ZFYVE1
ENSSSCG00000002337
ENSG00000165861
Zinc finger FYVE-type containing 1
Low tissue specificity
Detected in all
ZFYVE16
ENSSSCG00000014121
ENSG00000039319
Zinc finger FYVE-type containing 16
Tissue enhanced
Detected in all
brain:
62.6
ZFYVE19
ENSSSCG00000004761
ENSG00000166140
Zinc finger FYVE-type containing 19
Low tissue specificity
Detected in all
ZFYVE21
ENSSSCG00000040945
ENSG00000100711
Zinc finger FYVE-type containing 21
Low tissue specificity
Detected in all
ZFYVE26
ENSSSCG00000002298
ENSG00000072121
Zinc finger FYVE-type containing 26
Low tissue specificity
Detected in all
ZFYVE27
ENSSSCG00000010528
ENSG00000155256
Zinc finger FYVE-type containing 27
Low tissue specificity
Detected in all
ZFYVE28
ENSSSCG00000008689
ENSG00000159733
Zinc finger FYVE-type containing 28
Tissue enhanced
Detected in many
brain:
20.0
ZFYVE9
ENSSSCG00000003863
ENSG00000157077
Zinc finger FYVE-type containing 9
Low tissue specificity
Detected in all
ZGPAT
ENSSSCG00000036595
ENSG00000197114
Zinc finger CCCH-type and G-patch domain containing
Low tissue specificity
Detected in all
ZGRF1
ENSSSCG00000009120
ENSG00000138658
Zinc finger GRF-type containing 1
Low tissue specificity
Detected in all
ZHX1
ENSSSCG00000005984
ENSG00000165156
Zinc fingers and homeoboxes 1
Low tissue specificity
Detected in all
ZHX2
ENSSSCG00000021586
ENSG00000178764
Zinc fingers and homeoboxes 2
Low tissue specificity
Detected in all
ZHX3
ENSSSCG00000032566
ENSG00000174306
Zinc fingers and homeoboxes protein 3
Low tissue specificity
Detected in all
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