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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Keyword
Chromosome
1
2
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7
8
9
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15143 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
TMEM240
ENSSSCG00000038530
ENSG00000205090
Transmembrane protein 240
Tissue enhanced
Detected in many
brain:
11.1
TMEM241
ENSSSCG00000040452
ENSG00000134490
Transmembrane protein 241
Low tissue specificity
Detected in all
TMEM242
ENSSSCG00000004063
ENSG00000215712
Transmembrane protein 242
Low tissue specificity
Detected in all
TMEM243
ENSSSCG00000025326
ENSG00000135185
Transmembrane protein 243
Low tissue specificity
Detected in all
TMEM245
ENSSSCG00000005444
ENSG00000106771
Transmembrane protein 245
Low tissue specificity
Detected in all
TMEM246
ENSSSCG00000029687
ENSG00000165152
Transmembrane protein 246
Low tissue specificity
Detected in many
TMEM247
ENSSSCG00000008442
ENSG00000284701
Transmembrane protein 247
Tissue enriched
Detected in many
testis:
34.8
TMEM248
ENSSSCG00000007736
ENSG00000106609
Transmembrane protein 248
Low tissue specificity
Detected in all
TMEM249
ENSSSCG00000005910
ENSG00000261587
Transmembrane protein 249
Tissue enriched
Detected in many
testis:
58.8
TMEM250
ENSSSCG00000034024
ENSG00000238227
Transmembrane protein 250
Low tissue specificity
Detected in all
TMEM251
ENSSSCG00000002458
ENSG00000153485
Transmembrane protein 251
Tissue enhanced
Detected in all
male glands:
39.2
TMEM252
ENSSSCG00000037125
ENSG00000181778
Transmembrane protein 252
Tissue enhanced
Detected in all
kidney:
27.6
TMEM253
ENSSSCG00000030437
ENSG00000232070
Transmembrane protein 253
Tissue enhanced
Detected in all
small intestine:
27.4
TMEM254
ENSSSCG00000024300
ENSG00000133678
Transmembrane protein 254
Tissue enhanced
Detected in all
salivary gland:
118.7
TMEM258
ENSSSCG00000027538
ENSG00000134825
Transmembrane protein 258
Low tissue specificity
Detected in all
TMEM259
ENSSSCG00000027779
ENSG00000182087
Transmembrane protein 259
Low tissue specificity
Detected in all
TMEM260
ENSSSCG00000005062
ENSG00000070269
Transmembrane protein 260
Low tissue specificity
Detected in all
TMEM263
ENSSSCG00000038968
ENSG00000151135
Transmembrane protein 263
Tissue enhanced
Detected in all
male glands:
54.9
TMEM265
ENSSSCG00000035518
ENSG00000281991
Transmembrane protein 265
Low tissue specificity
Detected in all
TMEM266
ENSSSCG00000001863
ENSG00000169758
Transmembrane protein 266
Tissue enhanced
Detected in many
brain:
37.6
TMEM267
ENSSSCG00000032979
ENSG00000151881
Transmembrane protein 267
Tissue enhanced
Detected in all
male glands:
20.3
TMEM268
ENSSSCG00000032835
ENSG00000157693
Transmembrane protein 268
Low tissue specificity
Detected in all
TMEM269
ENSSSCG00000039678
ENSG00000274386
Transmembrane protein 269
Tissue enriched
Detected in many
testis:
52.5
TMEM30A
ENSSSCG00000033155
ENSG00000112697
Transmembrane protein 30A
Low tissue specificity
Detected in all
TMEM30B
ENSSSCG00000005094
ENSG00000182107
Transmembrane protein 30B
Tissue enhanced
Detected in many
male glands:
56.3
TMEM33
ENSSSCG00000037305
ENSG00000109133
Transmembrane protein 33
Tissue enhanced
Detected in all
choroid plexus:
44.5
TMEM35B
ENSSSCG00000032660
ENSG00000243749
Transmembrane protein 35B
Tissue enhanced
Detected in all
choroid plexus:
49.6
TMEM38A
ENSSSCG00000013864
ENSG00000072954
Transmembrane protein 38A
Tissue enriched
Detected in many
skeletal muscle:
129.5
TMEM38B
ENSSSCG00000039896
ENSG00000095209
Trimeric intracellular cation channel type B
Low tissue specificity
Detected in all
TMEM39A
ENSSSCG00000011901
ENSG00000176142
Transmembrane protein 39A
Low tissue specificity
Detected in all
TMEM39B
ENSSSCG00000032563
ENSG00000121775
Transmembrane protein 39B
Low tissue specificity
Detected in all
TMEM41B
ENSSSCG00000014579
ENSG00000166471
Transmembrane protein 41B
Tissue enhanced
Detected in all
male glands:
43.2
TMEM42
ENSSSCG00000031576
ENSG00000169964
Transmembrane protein 42
Low tissue specificity
Detected in all
TMEM43
ENSSSCG00000011603
ENSG00000170876
Transmembrane protein 43
Low tissue specificity
Detected in all
TMEM44
ENSSSCG00000011826
ENSG00000145014
Transmembrane protein 44
Low tissue specificity
Detected in all
TMEM45A
ENSSSCG00000011965
ENSG00000181458
Transmembrane protein 45A
Tissue enhanced
Detected in all
cartilage:
21.6
TMEM45B
ENSSSCG00000015241
ENSG00000151715
Transmembrane protein 45B
Tissue enhanced
Detected in all
large intestine:
42.3
TMEM47
ENSSSCG00000024132
ENSG00000147027
Transmembrane protein 47
Tissue enhanced
Detected in all
brain:
37.2
lens:
37.9
TMEM50A
ENSSSCG00000024267
ENSG00000183726
Transmembrane protein 50A
Low tissue specificity
Detected in all
TMEM50B
ENSSSCG00000034624
ENSG00000142188
Transmembrane protein 50B
Low tissue specificity
Detected in all
TMEM51
ENSSSCG00000021026
ENSG00000171729
Transmembrane protein 51
Low tissue specificity
Detected in all
TMEM52
ENSSSCG00000028530
ENSG00000178821
Transmembrane protein 52
Tissue enhanced
Detected in many
skeletal muscle:
98.9
TMEM52B
ENSSSCG00000032431
ENSG00000165685
Transmembrane protein 52B
Group enriched
Detected in many
heart:
41.0
kidney:
48.6
retina:
19.4
TMEM53
ENSSSCG00000027423
ENSG00000126106
Transmembrane protein 53
Low tissue specificity
Detected in all
TMEM59
ENSSSCG00000034261
ENSG00000116209
Transmembrane protein 59
Tissue enhanced
Detected in all
male glands:
89.1
TMEM60
ENSSSCG00000038541
ENSG00000135211
Transmembrane protein 60
Low tissue specificity
Detected in all
TMEM61
ENSSSCG00000025097
ENSG00000143001
Transmembrane protein 61
Low tissue specificity
Detected in all
TMEM62
ENSSSCG00000004716
ENSG00000137842
Transmembrane protein 62
Tissue enhanced
Detected in all
male glands:
34.4
TMEM63A
ENSSSCG00000010854
ENSG00000196187
CSC1-like protein 1
Low tissue specificity
Detected in all
TMEM63B
ENSSSCG00000001697
ENSG00000137216
Transmembrane protein 63B
Tissue enhanced
Detected in all
stomach:
63.6
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