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Human disease related genes
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UMAP gene cluster
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Keyword
Chromosome
1
2
3
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5
6
7
8
9
10
11
12
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14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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16395 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
DMP1
ENSSSCG00000009220
ENSG00000152592
Dentin matrix acidic phosphoprotein 1 precursor
Tissue enhanced
Detected in many
bone marrow:
32.0
brain:
20.7
DMPK
ENSSSCG00000038969
ENSG00000104936
DM1 protein kinase
Tissue enhanced
Detected in all
smooth muscle:
96.2
DMRTA1
ENSSSCG00000005131
ENSG00000176399
DMRT like family A1
Tissue enhanced
Detected in many
pituitary gland:
10.1
DMRTB1
ENSSSCG00000003847
ENSG00000143006
DMRT like family B with proline rich C-terminal 1
Tissue enriched
Detected in some
testis:
28.8
DMTF1
ENSSSCG00000015393
ENSG00000135164
Cyclin D binding myb like transcription factor 1
Low tissue specificity
Detected in all
DMTN
ENSSSCG00000009613
ENSG00000158856
Dematin actin binding protein
Tissue enhanced
Detected in many
brain:
43.9
lens:
117.6
DMWD
ENSSSCG00000038738
ENSG00000185800
DM1 locus, WD repeat containing
Low tissue specificity
Detected in all
DMXL1
ENSSSCG00000027857
ENSG00000172869
Dmx like 1
Low tissue specificity
Detected in all
DNA2
ENSSSCG00000010240
ENSG00000138346
DNA replication helicase/nuclease 2
Low tissue specificity
Detected in all
DNAAF2
ENSSSCG00000005007
ENSG00000165506
Dynein axonemal assembly factor 2
Low tissue specificity
Detected in all
DNAAF4
ENSSSCG00000004608
ENSG00000256061
Dynein axonemal assembly factor 4
Tissue enhanced
Detected in many
lens:
23.0
testis:
23.0
DNAAF5
ENSSSCG00000007543
ENSG00000164818
Dynein axonemal assembly factor 5
Low tissue specificity
Detected in all
DNAH11
ENSSSCG00000015379
ENSG00000105877
Dynein axonemal heavy chain 11
Tissue enhanced
Detected in many
choroid plexus:
16.0
fallopian tube:
31.5
lung:
27.2
upper respiratory system:
22.7
DNAH7
ENSSSCG00000032814
ENSG00000118997
Dynein axonemal heavy chain 7
Tissue enhanced
Detected in some
epididymis:
16.1
fallopian tube:
27.7
testis:
17.7
upper respiratory system:
16.9
DNAJA1
ENSSSCG00000011000
ENSG00000086061
DnaJ homolog subfamily A member 1
Tissue enhanced
Detected in all
ovary:
113.7
DNAJA2
ENSSSCG00000002846
ENSG00000069345
DnaJ heat shock protein family (Hsp40) member A2
Low tissue specificity
Detected in all
DNAJA3
ENSSSCG00000022874
ENSG00000103423
DnaJ heat shock protein family (Hsp40) member A3
Low tissue specificity
Detected in all
DNAJA4
ENSSSCG00000037646
ENSG00000140403
DnaJ homolog subfamily A member 4
Low tissue specificity
Detected in all
DNAJB1
ENSSSCG00000013784
ENSG00000132002
DnaJ homolog subfamily B member 1
Low tissue specificity
Detected in all
DNAJB12
ENSSSCG00000010288
ENSG00000148719
DnaJ heat shock protein family (Hsp40) member B12
Low tissue specificity
Detected in all
DNAJB14
ENSSSCG00000009177
ENSG00000164031
DnaJ heat shock protein family (Hsp40) member B14
Low tissue specificity
Detected in all
DNAJB2
ENSSSCG00000016217
ENSG00000135924
DnaJ heat shock protein family (Hsp40) member B2
Tissue enhanced
Detected in all
brain:
63.7
lens:
55.2
DNAJB4
ENSSSCG00000003766
ENSG00000162616
DnaJ heat shock protein family (Hsp40) member B4
Low tissue specificity
Detected in all
DNAJB5
ENSSSCG00000005297
ENSG00000137094
DnaJ heat shock protein family (Hsp40) member B5
Tissue enhanced
Detected in all
skeletal muscle:
53.5
smooth muscle:
76.7
DNAJB7
ENSSSCG00000034801
ENSG00000172404
DnaJ heat shock protein family (Hsp40) member B7
Group enriched
Detected in many
small intestine:
15.6
testis:
26.4
DNAJB9
ENSSSCG00000016653
ENSG00000128590
DnaJ heat shock protein family (Hsp40) member B9
Tissue enhanced
Detected in all
male glands:
66.5
DNAJC1
ENSSSCG00000026001
ENSG00000136770
DnaJ heat shock protein family (Hsp40) member C1
Low tissue specificity
Detected in all
DNAJC10
ENSSSCG00000016017
ENSG00000077232
DnaJ heat shock protein family (Hsp40) member C10
Tissue enriched
Detected in all
male glands:
170.0
DNAJC11
ENSSSCG00000003384
ENSG00000007923
DnaJ heat shock protein family (Hsp40) member C11
Low tissue specificity
Detected in all
DNAJC12
ENSSSCG00000035600
ENSG00000108176
DnaJ heat shock protein family (Hsp40) member C12
Low tissue specificity
Detected in all
DNAJC13
ENSSSCG00000011628
ENSG00000138246
DnaJ heat shock protein family (Hsp40) member C13
Low tissue specificity
Detected in all
DNAJC14
ENSSSCG00000000366
ENSG00000135392
DnaJ homolog subfamily C member 14
Low tissue specificity
Detected in all
DNAJC15
ENSSSCG00000038251
ENSG00000120675
DnaJ heat shock protein family (Hsp40) member C15
Low tissue specificity
Detected in all
DNAJC16
ENSSSCG00000003464
ENSG00000116138
DnaJ heat shock protein family (Hsp40) member C16
Low tissue specificity
Detected in all
DNAJC17
ENSSSCG00000004762
ENSG00000104129
DnaJ heat shock protein family (Hsp40) member C17
Low tissue specificity
Detected in all
DNAJC18
ENSSSCG00000014356
ENSG00000170464
DnaJ heat shock protein family (Hsp40) member C18
Low tissue specificity
Detected in all
DNAJC19
ENSSSCG00000011770
ENSG00000205981
Mitochondrial import inner membrane translocase subunit TIM14
Low tissue specificity
Detected in all
DNAJC2
ENSSSCG00000015423
ENSG00000105821
DnaJ heat shock protein family (Hsp40) member C2
Low tissue specificity
Detected in all
DNAJC21
ENSSSCG00000016828
ENSG00000168724
DnaJ heat shock protein family (Hsp40) member C21
Low tissue specificity
Detected in all
DNAJC22
ENSSSCG00000000198
ENSG00000178401
DnaJ heat shock protein family (Hsp40) member C22
Tissue enhanced
Detected in many
liver:
31.2
male glands:
31.4
DNAJC24
ENSSSCG00000026083
ENSG00000170946
DnaJ heat shock protein family (Hsp40) member C24
Low tissue specificity
Detected in all
DNAJC25
ENSSSCG00000005460
ENSG00000059769
DnaJ heat shock protein family (Hsp40) member C25
Low tissue specificity
Detected in all
DNAJC27
ENSSSCG00000008577
ENSG00000115137
DnaJ heat shock protein family (Hsp40) member C27
Tissue enhanced
Detected in many
brain:
15.9
testis:
14.4
DNAJC28
ENSSSCG00000028192
ENSG00000177692
DnaJ heat shock protein family (Hsp40) member C28
Low tissue specificity
Detected in all
DNAJC3
ENSSSCG00000026082
ENSG00000102580
DnaJ homolog subfamily C member 3 precursor
Low tissue specificity
Detected in all
DNAJC30
ENSSSCG00000007712
ENSG00000176410
DnaJ heat shock protein family (Hsp40) member C30
Low tissue specificity
Detected in all
DNAJC5
ENSSSCG00000031602
ENSG00000101152
DnaJ heat shock protein family (Hsp40) member C5
Low tissue specificity
Detected in all
DNAJC6
ENSSSCG00000003807
ENSG00000116675
Putative tyrosine-protein phosphatase auxilin
Tissue enhanced
Detected in many
brain:
54.6
lens:
18.8
pineal gland:
28.1
DNAJC8
ENSSSCG00000038907
ENSG00000126698
DnaJ heat shock protein family (Hsp40) member C8
Low tissue specificity
Detected in all
DNAJC9
ENSSSCG00000023482
ENSG00000213551
DnaJ heat shock protein family (Hsp40) member C9
Low tissue specificity
Detected in all
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