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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Keyword
Chromosome
1
2
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6
7
8
9
10
11
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Lymphoid tissue
Male glands
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Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15222 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
EXOSC2
ENSSSCG00000005704
ENSG00000130713
Exosome component 2
Low tissue specificity
Detected in all
EXOSC3
ENSSSCG00000005355
ENSG00000107371
Exosome component 3
Tissue enriched
Detected in all
testis:
28.4
EXOSC4
ENSSSCG00000005925
ENSG00000178896
Exosome component 4
Low tissue specificity
Detected in all
EXOSC5
ENSSSCG00000003015
ENSG00000077348
Exosome complex component RRP46
Low tissue specificity
Detected in all
EXOSC6
ENSSSCG00000002719
ENSG00000223496
Exosome component 6
Low tissue specificity
Detected in all
EXOSC7
ENSSSCG00000011300
ENSG00000075914
Exosome complex component RRP42
Low tissue specificity
Detected in all
EXOSC8
ENSSSCG00000009358
ENSG00000120699
Exosome component 8
Tissue enhanced
Detected in all
lens:
51.5
EXOSC9
ENSSSCG00000009096
ENSG00000123737
Exosome component 9
Low tissue specificity
Detected in all
EXPH5
ENSSSCG00000015010
ENSG00000110723
Exophilin 5
Tissue enhanced
Detected in many
liver:
32.8
skin:
45.3
EXT1
ENSSSCG00000006009
ENSG00000182197
Exostosin glycosyltransferase 1
Low tissue specificity
Detected in all
EXT2
ENSSSCG00000013281
ENSG00000151348
Exostosin glycosyltransferase 2
Low tissue specificity
Detected in all
EXTL2
ENSSSCG00000006861
ENSG00000162694
Exostosin-like 2
Tissue enhanced
Detected in many
brain:
20.5
testis:
17.5
EXTL3
ENSSSCG00000009680
ENSG00000012232
Exostosin like glycosyltransferase 3
Low tissue specificity
Detected in all
EYA2
ENSSSCG00000007453
ENSG00000064655
EYA transcriptional coactivator and phosphatase 2
Tissue enhanced
Detected in all
cartilage:
112.8
EYA3
ENSSSCG00000003580
ENSG00000158161
EYA transcriptional coactivator and phosphatase 3
Low tissue specificity
Detected in all
EZH1
ENSSSCG00000017382
ENSG00000108799
Histone-lysine N-methyltransferase EZH1
Low tissue specificity
Detected in all
EZH2
ENSSSCG00000028840
ENSG00000106462
Histone-lysine N-methyltransferase EZH2
Tissue enhanced
Detected in all
lymphoid tissue:
51.5
testis:
48.3
EZR
ENSSSCG00000004058
ENSG00000092820
Ezrin
Tissue enhanced
Detected in all
mesothelial tissue:
172.4
F10
ENSSSCG00000009558
ENSG00000126218
Coagulation factor X precursor
Tissue enriched
Detected in many
liver:
84.8
F11R
ENSSSCG00000006369
ENSG00000158769
Junctional adhesion molecule A precursor
Low tissue specificity
Detected in many
F13A1
ENSSSCG00000024310
ENSG00000124491
Coagulation factor XIII A chain
Tissue enhanced
Detected in many
skin:
36.9
upper respiratory system:
26.2
F13B
ENSSSCG00000023301
ENSG00000143278
Coagulation factor XIII B chain
Tissue enriched
Detected in all
liver:
46.6
F2R
ENSSSCG00000035355
ENSG00000181104
Proteinase-activated receptor 1 precursor
Low tissue specificity
Detected in all
F2RL1
ENSSSCG00000014091
ENSG00000164251
F2R like trypsin receptor 1
Tissue enhanced
Detected in many
large intestine:
23.6
F2RL2
ENSSSCG00000037582
ENSG00000164220
Coagulation factor II thrombin receptor like 2
Tissue enhanced
Detected in many
cartilage:
63.5
F3
ENSSSCG00000022447
ENSG00000117525
Tissue factor
Tissue enhanced
Detected in all
cornea:
64.5
ovary:
111.0
upper respiratory system:
53.4
F5
ENSSSCG00000006289
ENSG00000198734
Coagulation factor V precursor
Tissue enhanced
Detected in many
brain:
29.6
liver:
63.5
salivary gland:
23.0
upper respiratory system:
23.6
F8
ENSSSCG00000012818
ENSG00000185010
Coagulation factor VIII precursor
Tissue enhanced
Detected in many
penis:
47.6
FA2H
ENSSSCG00000002718
ENSG00000103089
Fatty acid 2-hydroxylase
Tissue enhanced
Detected in many
brain:
85.7
vagus nerve:
56.0
FAAP100
ENSSSCG00000029616
ENSG00000185504
Fanconi anemia core complex associated protein 100
Low tissue specificity
Detected in all
FAAP24
ENSSSCG00000040905
ENSG00000131944
Fanconi anemia core complex associated protein 24
Low tissue specificity
Detected in all
FABP2
ENSSSCG00000037272
ENSG00000145384
Fatty acid-binding protein, intestinal
Tissue enhanced
Detected in all
small intestine:
31.2
FABP3
ENSSSCG00000036883
ENSG00000121769
Fatty acid-binding protein, heart
Tissue enhanced
Detected in many
heart:
63.9
skeletal muscle:
53.6
FABP5
ENSSSCG00000006153
ENSG00000164687
Fatty acid-binding protein, epidermal
Tissue enriched
Detected in many
lens:
391.5
FABP9
ENSSSCG00000033728
ENSG00000205186
Fatty acid binding protein 9
Group enriched
Detected in some
choroid plexus:
25.1
skin:
78.7
FADD
ENSSSCG00000030888
ENSG00000168040
FAS-associated death domain protein
Low tissue specificity
Detected in all
FADS1
ENSSSCG00000024015
ENSG00000149485
Fatty acid desaturase 1
Low tissue specificity
Detected in all
FADS2
ENSSSCG00000013072
ENSG00000134824
Fatty acid desaturase 2
Tissue enhanced
Detected in all
adrenal gland:
119.4
brain:
87.0
FADS3
ENSSSCG00000013073
ENSG00000221968
Fatty acid desaturase 3
Tissue enhanced
Detected in many
lymphoid tissue:
79.8
FADS6
ENSSSCG00000017226
ENSG00000172782
Fatty acid desaturase 6
Tissue enhanced
Detected in many
epididymis:
47.3
liver:
40.5
FAF1
ENSSSCG00000003877
ENSG00000185104
Fas associated factor 1
Low tissue specificity
Detected in all
FAF2
ENSSSCG00000014057
ENSG00000113194
Fas associated factor family member 2
Low tissue specificity
Detected in all
FAH
ENSSSCG00000001780
ENSG00000103876
Fumarylacetoacetate hydrolase
Tissue enhanced
Detected in many
adrenal gland:
53.6
liver:
74.4
FAHD1
ENSSSCG00000039715
ENSG00000180185
Fumarylacetoacetate hydrolase domain containing 1
Tissue enhanced
Detected in all
lens:
57.6
FAIM
ENSSSCG00000023814
ENSG00000158234
Fas apoptotic inhibitory molecule 1
Tissue enhanced
Detected in all
retina:
52.1
FAIM2
ENSSSCG00000000206
ENSG00000135472
Fas apoptotic inhibitory molecule 2
Tissue enhanced
Detected in many
brain:
65.4
pineal gland:
35.4
retina:
35.6
FAM102A
ENSSSCG00000005631
ENSG00000167106
Family with sequence similarity 102 member A
Tissue enhanced
Detected in all
stomach:
91.3
FAM102B
ENSSSCG00000006850
ENSG00000162636
Family with sequence similarity 102 member B
Low tissue specificity
Detected in many
FAM103A1
ENSSSCG00000038630
ENSG00000169612
Family with sequence similarity 103 member A1
Tissue enhanced
Detected in all
lens:
50.4
FAM104A
ENSSSCG00000031686
ENSG00000133193
Family with sequence similarity 104 member A
Tissue enriched
Detected in all
testis:
75.5
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