We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
3143 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 63 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
TIAM2
ENSSSCG00000004065
ENSG00000146426
T cell lymphoma invasion and metastasis 2
Tissue enhanced
Detected in many
brain:
33.8
cartilage:
71.5
TICAM1
ENSSSCG00000024771
ENSG00000127666
TIR domain-containing adapter molecule 1
Tissue enhanced
Detected in many
liver:
34.9
stomach:
55.7
TICRR
ENSSSCG00000040355
ENSG00000140534
TOPBP1 interacting checkpoint and replication regulator
Tissue enhanced
Detected in many
lymphoid tissue:
14.1
TIE1
ENSSSCG00000003950
ENSG00000066056
Tyrosine kinase with immunoglobulin like and EGF like domains 1
Low tissue specificity
Detected in all
TIGIT
ENSSSCG00000029267
ENSG00000181847
T cell immunoreceptor with Ig and ITIM domains
Tissue enhanced
Detected in many
lymphoid tissue:
26.3
TIMP1
ENSSSCG00000012277
ENSG00000102265
Metalloproteinase inhibitor 1 precursor
Tissue enriched
Detected in many
ovary:
718.4
TIMP3
ENSSSCG00000031866
ENSG00000100234
TIMP metallopeptidase inhibitor 3
Low tissue specificity
Detected in all
TINAGL1
ENSSSCG00000003600
ENSG00000142910
Tubulointerstitial nephritis antigen like 1
Low tissue specificity
Detected in many
TK1
ENSSSCG00000037120
ENSG00000167900
Thymidine kinase 1
Tissue enhanced
Detected in many
lymphoid tissue:
25.5
TKT
ENSSSCG00000021408
ENSG00000163931
Transketolase
Tissue enhanced
Detected in all
cornea:
113.9
TLDC1
ENSSSCG00000002672
ENSG00000140950
TBC/LysM-associated domain containing 1
Tissue enhanced
Detected in all
esophagus:
25.5
male glands:
33.4
TLDC2
ENSSSCG00000031690
ENSG00000101342
TBC/LysM-associated domain containing 2
Tissue enhanced
Detected in many
large intestine:
19.1
small intestine:
28.5
TLE1
ENSSSCG00000005291
ENSG00000196781
Transducin like enhancer of split 1
Low tissue specificity
Detected in all
TLE2
ENSSSCG00000028995
ENSG00000065717
Transducin like enhancer of split 2
Tissue enhanced
Detected in many
male glands:
43.4
TLL1
ENSSSCG00000008853
ENSG00000038295
Tolloid like 1
Tissue enhanced
Detected in many
brain:
53.6
synovial tissue:
21.0
TLR1
ENSSSCG00000026583
ENSG00000174125
Toll-like receptor 1 precursor
Tissue enhanced
Detected in many
lymphoid tissue:
26.3
TLR10
ENSSSCG00000027877
ENSG00000174123
Toll-like receptor 10
Tissue enhanced
Detected in all
lymphoid tissue:
21.6
TLR4
ENSSSCG00000005503
ENSG00000136869
Toll-like receptor 4 isoform 1 precursor
Tissue enhanced
Detected in many
male glands:
40.1
TLR8
ENSSSCG00000012118
ENSG00000101916
Toll-like receptor 8 precursor
Tissue enriched
Detected in all
lymphoid tissue:
42.9
TLX1
ENSSSCG00000010561
ENSG00000107807
T cell leukemia homeobox 1
Group enriched
Detected in some
lymphoid tissue:
36.2
salivary gland:
42.5
TMCC3
ENSSSCG00000000906
ENSG00000057704
Transmembrane and coiled-coil domain family 3
Tissue enhanced
Detected in all
stomach:
36.3
TMEM123
ENSSSCG00000031170
ENSG00000152558
Transmembrane protein 123
Tissue enhanced
Detected in all
lens:
69.8
lymphoid tissue:
71.9
TMEM125
ENSSSCG00000024697
ENSG00000179178
Transmembrane protein 125
Tissue enhanced
Detected in many
brain:
30.3
epididymis:
24.1
kidney:
22.3
male glands:
27.0
TMEM132E
ENSSSCG00000022987
ENSG00000181291
Transmembrane protein 132E
Tissue enhanced
Detected in many
brain:
13.7
dura mater:
8.8
TMEM150B
ENSSSCG00000031110
ENSG00000180061
Transmembrane protein 150B
Tissue enhanced
Detected in many
liver:
34.1
TMEM163
ENSSSCG00000015700
ENSG00000152128
Transmembrane protein 163
Tissue enhanced
Detected in many
brain:
21.8
heart:
8.5
lymphoid tissue:
9.7
TMEM176A
ENSSSCG00000016443
ENSG00000002933
Transmembrane protein 176A
Tissue enhanced
Detected in many
gallbladder:
91.7
TMEM176B
ENSSSCG00000016444
ENSG00000106565
Transmembrane protein 176B
Tissue enhanced
Detected in many
gallbladder:
66.8
TMEM215
ENSSSCG00000011002
ENSG00000188133
Transmembrane protein 215
Tissue enhanced
Detected in many
brain:
16.1
pineal gland:
11.5
retina:
19.4
TMEM229B
ENSSSCG00000023791
ENSG00000198133
Transmembrane protein 229B
Tissue enhanced
Detected in many
liver:
55.5
TMEM232
ENSSSCG00000014196
ENSG00000186952
Transmembrane protein 232
Tissue enriched
Detected in all
lymphoid tissue:
45.7
TMEM235
ENSSSCG00000035360
ENSG00000204278
Transmembrane protein 235
Tissue enhanced
Detected in many
lymphoid tissue:
15.7
stomach:
9.4
TMEM237
ENSSSCG00000035161
ENSG00000155755
Transmembrane protein 237
Tissue enriched
Detected in many
retina:
47.9
TMEM245
ENSSSCG00000005444
ENSG00000106771
Transmembrane protein 245
Low tissue specificity
Detected in all
TMEM255B
ENSSSCG00000009564
ENSG00000184497
Transmembrane protein 255B
Tissue enhanced
Detected in many
choroid plexus:
11.6
cornea:
21.7
lymphoid tissue:
30.5
TMEM26
ENSSSCG00000023525
ENSG00000196932
Transmembrane protein 26
Tissue enhanced
Detected in some
brain:
24.4
ovary:
48.7
TMEM30B
ENSSSCG00000005094
ENSG00000182107
Transmembrane protein 30B
Tissue enhanced
Detected in many
male glands:
56.3
TMEM47
ENSSSCG00000024132
ENSG00000147027
Transmembrane protein 47
Tissue enhanced
Detected in all
brain:
37.2
lens:
37.9
TMEM59L
ENSSSCG00000013911
ENSG00000105696
Transmembrane protein 59-like precursor
Group enriched
Detected in many
brain:
64.7
pineal gland:
64.0
pituitary gland:
19.5
retina:
21.7
TMEM8A
ENSSSCG00000007985
ENSG00000129925
Transmembrane protein 8A
Tissue enhanced
Detected in many
stomach:
68.3
TMEM9
ENSSSCG00000027928
ENSG00000116857
Transmembrane protein 9
Low tissue specificity
Detected in many
TMIGD3
ENSSSCG00000006787
ENSG00000121933
Transmembrane and immunoglobulin domain containing 3 isoform 2 precursor
Tissue enriched
Detected in some
testis:
110.8
TMOD2
ENSSSCG00000004628
ENSG00000128872
Tropomodulin 2
Group enriched
Detected in many
brain:
53.7
lens:
33.7
pineal gland:
14.7
vagus nerve:
17.7
TMPO
ENSSSCG00000038487
ENSG00000120802
Thymopoietin
Tissue enhanced
Detected in all
lymphoid tissue:
61.1
TMPRSS11A
ENSSSCG00000008927
ENSG00000187054
Transmembrane serine protease 11A
Tissue enhanced
Detected in some
esophagus:
10.8
lymphoid tissue:
15.1
mouth:
47.3
upper respiratory system:
23.3
TMPRSS11D
ENSSSCG00000008926
ENSG00000153802
Transmembrane serine protease 11D
Group enriched
Detected in some
mouth:
54.3
upper respiratory system:
18.7
TMPRSS11F
ENSSSCG00000008930
ENSG00000198092
Transmembrane serine protease 11F
Tissue enhanced
Detected in many
cornea:
15.4
TMPRSS4
ENSSSCG00000015086
ENSG00000137648
Transmembrane serine protease 4
Tissue enhanced
Detected in all
ductus deferens:
33.2
large intestine:
46.9
TMPRSS9
ENSSSCG00000028363
ENSG00000178297
Transmembrane serine protease 9
Group enriched
Detected in many
epididymis:
28.4
lymphoid tissue:
12.2
TMTC1
ENSSSCG00000027447
ENSG00000133687
Transmembrane and tetratricopeptide repeat containing 1
Tissue enhanced
Detected in many
cartilage:
53.6
« prev
| Page
of 63 |
next »