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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
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Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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THE PROJECT
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916 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000013057
Group enriched
Detected in some
kidney:
20.6
liver:
73.4
na
ENSSSCG00000013150
Tissue enriched
Detected in some
liver:
163.9
na
ENSSSCG00000013366
L-lactate dehydrogenase A chain
Group enriched
Detected in many
cornea:
239.2
skeletal muscle:
236.9
na
ENSSSCG00000014060
ENSG00000122203
Putative monooxygenase p33MONOX
Tissue enhanced
Detected in all
male glands:
113.7
na
ENSSSCG00000014212
Group enriched
Detected in some
epididymis:
51.6
kidney:
26.3
na
ENSSSCG00000015390
ENSG00000085563
ATP-binding cassette, sub-family B (MDR/TAP), member 1
Group enriched
Detected in many
adrenal gland:
120.4
ovary:
77.4
na
ENSSSCG00000015401
Tissue enhanced
Detected in many
brain:
38.3
epididymis:
15.9
pituitary gland:
19.6
retina:
23.8
na
ENSSSCG00000015408
Tissue enhanced
Detected in many
adrenal gland:
36.9
na
ENSSSCG00000015632
ENSG00000106078
Tissue enhanced
Detected in many
heart:
43.9
kidney:
37.5
na
ENSSSCG00000015699
ENSG00000153086
Tissue enhanced
Detected in all
kidney:
35.4
liver:
17.5
na
ENSSSCG00000015747
ENSG00000036448
Group enriched
Detected in some
heart:
141.1
skeletal muscle:
83.1
na
ENSSSCG00000016806
Tissue enhanced
Detected in many
brain:
27.3
choroid plexus:
30.3
na
ENSSSCG00000016837
Tissue enhanced
Detected in many
liver:
41.6
na
ENSSSCG00000017062
ENSG00000145850
Tissue enhanced
Detected in many
lymphoid tissue:
53.3
synovial tissue:
28.0
upper respiratory system:
31.7
na
ENSSSCG00000017383
ENSG00000131471
Tissue enriched
Detected in many
liver:
107.5
na
ENSSSCG00000017754
ENSG00000168961,ENSG00000170298,ENSG00000171916
Galectin-9 isoform 5
Tissue enhanced
Detected in many
small intestine:
65.6
stomach:
86.5
na
ENSSSCG00000020706
ENSG00000159228
Carbonyl reductase
Tissue enhanced
Detected in all
liver:
69.0
male glands:
59.8
testis:
86.1
na
ENSSSCG00000020725
ENSG00000065361
Tissue enhanced
Detected in many
liver:
49.6
vagus nerve:
57.8
na
ENSSSCG00000020872
ENSG00000162366
Tissue enriched
Detected in many
kidney:
160.6
na
ENSSSCG00000021041
ENSG00000162877
N-fatty-acyl-amino acid synthase/hydrolase PM20D1
Tissue enriched
Detected in many
kidney:
122.9
na
ENSSSCG00000021375
ENSG00000171004
Group enriched
Detected in some
brain:
9.3
cartilage:
19.1
kidney:
8.2
na
ENSSSCG00000022246
ENSG00000160223,ENSG00000277117
Low tissue specificity
Detected in many
na
ENSSSCG00000022738
Group enriched
Detected in some
kidney:
127.0
liver:
133.9
na
ENSSSCG00000022759
Tissue enhanced
Detected in some
kidney:
15.2
liver:
38.6
lung:
10.1
upper respiratory system:
19.3
na
ENSSSCG00000023012
Tissue enhanced
Detected in many
male glands:
13.1
mesothelial tissue:
14.6
na
ENSSSCG00000023192
Tissue enhanced
Detected in many
choroid plexus:
49.6
kidney:
32.6
retina:
18.8
na
ENSSSCG00000023325
ENSG00000114786,ENSG00000243989
Aminoacylase-1
Group enriched
Detected in all
kidney:
111.2
liver:
34.7
na
ENSSSCG00000023479
Tissue enhanced
Detected in many
cornea:
37.9
na
ENSSSCG00000023611
ENSG00000168477
Tenascin-X precursor
Tissue enhanced
Detected in many
cartilage:
84.7
synovial tissue:
96.3
na
ENSSSCG00000023612
Tissue enriched
Detected in some
testis:
28.7
na
ENSSSCG00000023643
ENSG00000131828
Tissue enhanced
Detected in all
kidney:
136.6
skeletal muscle:
65.8
na
ENSSSCG00000024045
Tissue enhanced
Detected in all
skeletal muscle:
44.9
na
ENSSSCG00000024914
ENSG00000243649
Complement factor B precursor
Tissue enhanced
Detected in many
liver:
148.2
small intestine:
99.1
na
ENSSSCG00000025597
Tissue enriched
Detected in some
skin:
219.6
na
ENSSSCG00000026180
Tissue enhanced
Detected in many
bone marrow:
13.1
brain:
48.7
pituitary gland:
15.0
na
ENSSSCG00000026221
Tissue enriched
Detected in some
testis:
133.9
na
ENSSSCG00000026520
ENSG00000101846
Tissue enhanced
Detected in some
brain:
9.8
choroid plexus:
14.3
kidney:
27.7
na
ENSSSCG00000027013
Cytochrome P450, family 4, subfamily F, polypeptide 55 precursor
Tissue enhanced
Detected in many
male glands:
100.3
na
ENSSSCG00000027118
Tissue enhanced
Detected in all
epididymis:
64.9
small intestine:
24.1
na
ENSSSCG00000027137
Tissue enhanced
Detected in many
large intestine:
19.4
na
ENSSSCG00000027279
Tissue enriched
Detected in many
brain:
25.0
na
ENSSSCG00000027453
Group enriched
Detected in all
kidney:
39.4
liver:
19.0
na
ENSSSCG00000027454
ENSG00000103485
Group enriched
Detected in all
kidney:
42.6
liver:
51.1
na
ENSSSCG00000027991
ENSG00000162572
Tissue enhanced
Detected in many
epididymis:
16.1
testis:
51.2
na
ENSSSCG00000028341
ENSG00000204176,ENSG00000277758
Low tissue specificity
Detected in many
na
ENSSSCG00000029248
ENSG00000184999
Tissue enriched
Detected in some
kidney:
40.1
na
ENSSSCG00000029257
Sperm-associated acrosin inhibitor precursor
Tissue enriched
Detected in some
male glands:
566.2
na
ENSSSCG00000029791
Low tissue specificity
Detected in many
na
ENSSSCG00000030492
Tissue enhanced
Detected in many
cornea:
37.6
large intestine:
23.0
na
ENSSSCG00000030539
ENSG00000174562
Tissue enriched
Detected in some
salivary gland:
64.5
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