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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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3143 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000008032
Tryptase precursor
Tissue enriched
Detected in some
lymphoid tissue:
38.7
na
ENSSSCG00000008063
ENSG00000215148
Tissue enriched
Detected in some
lymphoid tissue:
19.2
na
ENSSSCG00000008314
ENSG00000116039
Tissue enhanced
Detected in some
fallopian tube:
33.6
kidney:
103.8
na
ENSSSCG00000008422
ENSG00000243244
Tissue enhanced
Detected in all
cervix:
81.1
na
ENSSSCG00000008531
Low tissue specificity
Detected in all
na
ENSSSCG00000008576
ENSG00000138101
Tissue enhanced
Detected in all
male glands:
91.3
na
ENSSSCG00000008769
Tissue enhanced
Detected in many
lung:
56.8
synovial tissue:
29.4
na
ENSSSCG00000008812
Low tissue specificity
Detected in all
na
ENSSSCG00000008929
Tissue enhanced
Detected in some
cornea:
7.9
lymphoid tissue:
15.7
mouth:
8.3
upper respiratory system:
12.0
na
ENSSSCG00000008954
Tissue enhanced
Detected in many
cartilage:
86.3
liver:
86.3
na
ENSSSCG00000009060
ENSG00000196782
Tissue enhanced
Detected in all
male glands:
35.4
na
ENSSSCG00000009213
ENSG00000118777
Low tissue specificity
Detected in many
na
ENSSSCG00000009489
Tissue enriched
Detected in many
cartilage:
170.3
na
ENSSSCG00000009498
Tissue enhanced
Detected in some
large intestine:
17.5
lymphoid tissue:
7.5
small intestine:
24.0
na
ENSSSCG00000009500
Claudin-10 precursor
Tissue enhanced
Detected in many
esophagus:
80.3
fallopian tube:
22.7
kidney:
25.1
upper respiratory system:
25.0
na
ENSSSCG00000009566
ENSG00000283199
Tissue enriched
Detected in some
testis:
113.5
na
ENSSSCG00000009694
Low tissue specificity
Detected in all
na
ENSSSCG00000009839
ENSG00000122966
Tissue enhanced
Detected in many
brain:
23.6
na
ENSSSCG00000009953
ENSG00000197077
Low tissue specificity
Detected in all
na
ENSSSCG00000010056
ENSG00000100031,ENSG00000133475
Glutathione hydrolase 1 proenzyme
Group enriched
Detected in many
ductus deferens:
25.6
epididymis:
73.0
kidney:
56.0
lymphoid tissue:
31.7
ovary:
85.8
na
ENSSSCG00000010077
Tissue enriched
Detected in some
lymphoid tissue:
56.2
na
ENSSSCG00000010128
ENSG00000184702
Tissue enhanced
Detected in many
brain:
42.9
na
ENSSSCG00000010214
ENSG00000170312
Cyclin-dependent kinase 1
Tissue enhanced
Detected in all
lymphoid tissue:
31.8
na
ENSSSCG00000010359
Group enriched
Detected in many
heart:
152.7
skeletal muscle:
336.3
na
ENSSSCG00000010370
ENSG00000264230
Annexin A8
Tissue enhanced
Detected in many
cartilage:
88.9
cornea:
140.2
mesothelial tissue:
67.1
na
ENSSSCG00000010491
Tissue enhanced
Detected in many
fallopian tube:
61.9
na
ENSSSCG00000010497
ENSG00000138185
Ectonucleoside triphosphate diphosphohydrolase 1
Low tissue specificity
Detected in all
na
ENSSSCG00000010703
ENSG00000166033
Tissue enhanced
Detected in all
lens:
171.5
na
ENSSSCG00000010850
Low tissue specificity
Detected in all
na
ENSSSCG00000010893
ENSG00000000971
Complement factor H precursor
Tissue enhanced
Detected in many
liver:
146.5
synovial tissue:
73.4
na
ENSSSCG00000011234
ENSG00000153551
CKLF-like MARVEL transmembrane domain-containing protein 7
Tissue enhanced
Detected in many
lens:
53.4
lymphoid tissue:
41.5
na
ENSSSCG00000011436
ENSG00000173366,ENSG00000239732
Toll-like receptor 9
Tissue enhanced
Detected in many
lymphoid tissue:
16.8
na
ENSSSCG00000011729
ENSG00000151967
Tissue enhanced
Detected in many
brain:
38.1
lens:
46.9
skeletal muscle:
34.4
na
ENSSSCG00000011744
Tissue enhanced
Detected in many
stomach:
62.9
thyroid gland:
79.4
na
ENSSSCG00000011850
ENSG00000145113
Mucin-4 precursor
Tissue enriched
Detected in many
upper respiratory system:
155.9
na
ENSSSCG00000011856
Low tissue specificity
Detected in many
na
ENSSSCG00000012003
Tissue enhanced
Detected in many
brain:
41.7
retina:
37.6
na
ENSSSCG00000012049
ENSG00000180509,ENSG00000276289
Group enriched
Detected in many
ductus deferens:
18.2
heart:
53.0
ovary:
16.4
small intestine:
35.1
na
ENSSSCG00000012074
ENSG00000182240
Low tissue specificity
Detected in many
na
ENSSSCG00000012152
ENSG00000047634
Tissue enhanced
Detected in all
lymphoid tissue:
29.7
na
ENSSSCG00000012238
ENSG00000156298,ENSG00000250349
Tissue enhanced
Detected in many
brain:
64.9
pineal gland:
25.4
na
ENSSSCG00000012319
Tissue enhanced
Detected in many
brain:
53.6
na
ENSSSCG00000012530
Transcription elongation factor A protein-like 2
Tissue enhanced
Detected in many
ductus deferens:
31.3
epididymis:
16.2
pituitary gland:
21.3
na
ENSSSCG00000012557
ENSG00000198088
Tissue enhanced
Detected in many
pituitary gland:
21.1
testis:
16.6
na
ENSSSCG00000012571
Tissue enhanced
Detected in many
cervix:
39.4
lens:
48.1
na
ENSSSCG00000012699
Four and a half LIM domains protein 1
Tissue enhanced
Detected in many
skeletal muscle:
443.8
na
ENSSSCG00000012811
Prefoldin subunit 3
Low tissue specificity
Detected in all
na
ENSSSCG00000012832
ENSG00000101825
Tissue enhanced
Detected in many
cartilage:
89.1
na
ENSSSCG00000012886
ENSG00000171067
Low tissue specificity
Detected in all
na
ENSSSCG00000012916
ENSG00000175482,ENSG00000256514
Low tissue specificity
Detected in all
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