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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Other diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
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113 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000006932
ENSG00000016602
Group enriched
Detected in some
large intestine:
64.1
small intestine:
113.7
na
ENSSSCG00000008115
ENSG00000172005
Tissue enhanced
Detected in many
brain:
64.7
kidney:
55.1
stomach:
57.4
vagus nerve:
70.1
na
ENSSSCG00000009250
Group enriched
Detected in some
large intestine:
33.2
small intestine:
33.9
na
ENSSSCG00000010792
ENSG00000165828
Group enriched
Detected in many
large intestine:
22.3
small intestine:
61.5
na
ENSSSCG00000011856
Low tissue specificity
Detected in many
na
ENSSSCG00000022258
Tissue enhanced
Detected in all
large intestine:
69.0
na
ENSSSCG00000023546
Tissue enriched
Detected in many
small intestine:
51.2
na
ENSSSCG00000030112
Tissue enhanced
Detected in all
lens:
34.8
na
ENSSSCG00000030800
ENSG00000165164
Tissue enhanced
Detected in some
brain:
14.9
choroid plexus:
14.3
fallopian tube:
48.9
lung:
14.8
upper respiratory system:
16.8
na
ENSSSCG00000031527
Tissue enhanced
Detected in many
cervix:
28.5
large intestine:
41.5
male glands:
111.2
na
ENSSSCG00000031992
Tissue enriched
Detected in many
small intestine:
52.7
na
ENSSSCG00000035033
ENSG00000159763
Group enriched
Detected in some
salivary gland:
297.8
upper respiratory system:
391.2
na
ENSSSCG00000035617
Tissue enhanced
Detected in many
choroid plexus:
50.5
salivary gland:
45.9
na
ENSSSCG00000035652
Tissue enhanced
Detected in many
brain:
39.4
heart:
43.1
male glands:
35.8
na
ENSSSCG00000037045
Tissue enriched
Detected in some
adrenal gland:
81.8
na
ENSSSCG00000037259
Tissue enriched
Detected in some
small intestine:
92.2
na
ENSSSCG00000037422
Tissue enhanced
Detected in some
lung:
44.1
stomach:
37.1
upper respiratory system:
42.1
na
ENSSSCG00000038182
Group enriched
Detected in some
esophagus:
70.9
mouth:
67.7
salivary gland:
79.4
small intestine:
106.5
na
ENSSSCG00000038606
Tissue enriched
Detected in some
large intestine:
33.9
na
ENSSSCG00000040748
Tissue enhanced
Detected in many
male glands:
25.3
NOS2
ENSSSCG00000017755
ENSG00000007171
Nitric oxide synthase, inducible
Tissue enhanced
Detected in many
cartilage:
34.7
large intestine:
42.1
NR1H4
ENSSSCG00000000875
ENSG00000012504
Bile acid receptor
Tissue enhanced
Detected in some
adrenal gland:
22.5
liver:
68.0
small intestine:
44.1
thyroid gland:
35.6
ODF3L2
ENSSSCG00000032811
ENSG00000181781
Outer dense fiber of sperm tails 3 like 2
Tissue enriched
Detected in some
testis:
84.0
OLFM4
ENSSSCG00000009444
ENSG00000102837
Olfactomedin 4
Group enriched
Detected in some
large intestine:
266.2
stomach:
97.8
upper respiratory system:
106.9
P2RY2
ENSSSCG00000040207
ENSG00000175591
P2Y purinoceptor 2
Tissue enhanced
Detected in many
vagus nerve:
52.1
PADI2
ENSSSCG00000026478
ENSG00000117115
Peptidyl arginine deiminase 2
Group enriched
Detected in many
brain:
110.3
upper respiratory system:
33.2
PARP15
ENSSSCG00000011875
ENSG00000173200
Poly(ADP-ribose) polymerase family member 15
Group enriched
Detected in some
large intestine:
59.5
small intestine:
95.1
PDCD1
ENSSSCG00000037319
ENSG00000188389
Programmed cell death protein 1 precursor
Tissue enhanced
Detected in some
large intestine:
11.0
lymphoid tissue:
14.8
thyroid gland:
7.5
PITX2
ENSSSCG00000034708
ENSG00000164093
Pituitary homeobox 2
Tissue enhanced
Detected in many
cornea:
16.8
large intestine:
18.7
mouth:
13.0
pituitary gland:
35.4
urinary bladder:
12.4
PLCXD3
ENSSSCG00000033993
ENSG00000182836
Phosphatidylinositol specific phospholipase C X domain containing 3
Tissue enhanced
Detected in many
brain:
40.6
pineal gland:
18.1
PRDM6
ENSSSCG00000014238
ENSG00000061455
PR/SET domain 6
Tissue enhanced
Detected in many
cervix:
23.2
smooth muscle:
34.7
urinary bladder:
29.3
PRDX6
ENSSSCG00000022742
ENSG00000117592
Peroxiredoxin-6
Tissue enhanced
Detected in all
large intestine:
134.3
PTPRH
ENSSSCG00000024567
ENSG00000080031
Protein tyrosine phosphatase, receptor type H
Group enriched
Detected in some
large intestine:
31.1
small intestine:
24.3
stomach:
31.4
PYY
ENSSSCG00000025414
ENSG00000131096
Peptide YY precursor
Tissue enhanced
Detected in some
large intestine:
29.9
small intestine:
88.2
stomach:
21.9
RASD2
ENSSSCG00000031155
ENSG00000100302
RASD family member 2
Tissue enriched
Detected in many
brain:
82.9
S100A1
ENSSSCG00000031053
ENSG00000160678
S100 calcium binding protein A1
Tissue enhanced
Detected in many
brain:
250.1
cartilage:
96.8
pineal gland:
70.9
SCGB1A1
ENSSSCG00000013060
ENSG00000149021
Secretoglobin family 1A member 1
Tissue enriched
Detected in some
lung:
599.3
SELENBP1
ENSSSCG00000006624
ENSG00000143416
Selenium binding protein 1
Tissue enhanced
Detected in all
large intestine:
122.7
skin:
83.9
SERPINA11
ENSSSCG00000002479
ENSG00000186910
Serpin family A member 11
Tissue enriched
Detected in some
liver:
78.2
SFRP4
ENSSSCG00000035299
ENSG00000106483
Secreted frizzled-related protein 4 precursor
Tissue enhanced
Detected in many
dura mater:
134.2
upper respiratory system:
41.4
vagus nerve:
48.3
SFTPD
ENSSSCG00000010334
ENSG00000133661
Pulmonary surfactant-associated protein D
Tissue enriched
Detected in many
lung:
66.8
SI
ENSSSCG00000011735
ENSG00000090402
Sucrase-isomaltase
Tissue enriched
Detected in some
small intestine:
104.8
SLC10A2
ENSSSCG00000026317
ENSG00000125255
Ileal sodium/bile acid cotransporter
Tissue enriched
Detected in some
small intestine:
70.7
SLC30A10
ENSSSCG00000039095
ENSG00000196660
Solute carrier family 30 member 10
Group enriched
Detected in some
brain:
7.6
large intestine:
20.0
liver:
23.8
small intestine:
20.4
SLC51A
ENSSSCG00000011846
ENSG00000163959
Organic solute transporter subunit alpha
Tissue enhanced
Detected in all
small intestine:
36.5
SLC9A3
ENSSSCG00000039413
ENSG00000066230
Solute carrier family 9 member A3
Group enriched
Detected in some
gallbladder:
88.1
kidney:
22.6
large intestine:
50.9
male glands:
73.6
stomach:
40.8
SLPI
ENSSSCG00000039573
ENSG00000124107
Antileukoproteinase
Tissue enhanced
Detected in many
adipose tissue:
31.8
aorta:
33.3
fallopian tube:
64.8
SPAI-2
ENSSSCG00000033675
Sus scrofa elafin family member (WAP-3), mRNA.
Group enriched
Detected in some
large intestine:
63.8
small intestine:
105.7
SPAM1
ENSSSCG00000016601
ENSG00000106304
Hyaluronidase PH-20
Tissue enhanced
Detected in some
large intestine:
12.1
small intestine:
8.5
testis:
44.7
SPINK1
ENSSSCG00000034511
ENSG00000164266
Serine peptidase inhibitor, Kazal type 1
Tissue enriched
Detected in some
small intestine:
72.4
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