We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
916 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 19 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
HEPACAM2
ENSSSCG00000025870
ENSG00000188175
HEPACAM family member 2
Tissue enhanced
Detected in all
large intestine:
36.4
pituitary gland:
41.9
HGD
ENSSSCG00000021227
ENSG00000113924
Homogentisate 1,2-dioxygenase
Tissue enriched
Detected in many
liver:
91.2
HGFAC
ENSSSCG00000008700
ENSG00000109758
HGF activator
Tissue enriched
Detected in many
liver:
93.5
HHIP
ENSSSCG00000009045
ENSG00000164161
Hedgehog interacting protein
Tissue enhanced
Detected in many
cartilage:
79.0
lymphoid tissue:
59.2
HHLA2
ENSSSCG00000027275
ENSG00000114455
HERV-H LTR-associating 2
Group enriched
Detected in all
kidney:
61.9
large intestine:
31.9
liver:
58.9
small intestine:
46.3
HIF1A
ENSSSCG00000005096
ENSG00000100644
Hypoxia-inducible factor 1-alpha
Tissue enhanced
Detected in all
cartilage:
106.3
HIST1H1D
ENSSSCG00000001137
ENSG00000124575
Histone cluster 1 H1 family member d
Tissue enhanced
Detected in all
lymphoid tissue:
98.1
HIST1H2BA
ENSSSCG00000036045
ENSG00000146047
Histone cluster 1 H2B family member a
Tissue enriched
Detected in some
testis:
359.7
HIST1H2BB
ENSSSCG00000031122
ENSG00000276410
Histone cluster 1 H2B family member b
Tissue enhanced
Detected in all
lymphoid tissue:
131.4
HIST3H2A
ENSSSCG00000040622
ENSG00000181218
Histone cluster 3 H2A
Tissue enhanced
Detected in many
brain:
23.1
pituitary gland:
23.2
HMOX1
ENSSSCG00000039745
ENSG00000100292
Heme oxygenase 1
Tissue enriched
Detected in many
lymphoid tissue:
118.9
HMX2
ENSSSCG00000010725
ENSG00000188816
H6 family homeobox 2
Tissue enhanced
Detected in some
brain:
6.6
kidney:
15.4
stomach:
3.4
HNF1A
ENSSSCG00000009919
ENSG00000135100
Hepatocyte nuclear factor 1-alpha
Tissue enhanced
Detected in some
kidney:
44.0
liver:
42.4
small intestine:
18.9
stomach:
31.4
HNF4A
ENSSSCG00000007371
ENSG00000101076
Hepatocyte nuclear factor 4-alpha
Tissue enhanced
Detected in some
kidney:
56.6
large intestine:
36.1
liver:
68.3
small intestine:
31.8
stomach:
61.7
HNF4G
ENSSSCG00000034242
ENSG00000164749
Hepatocyte nuclear factor 4 gamma
Group enriched
Detected in some
large intestine:
44.1
small intestine:
52.4
HOGA1
ENSSSCG00000010523
ENSG00000241935
4-hydroxy-2-oxoglutarate aldolase, mitochondrial
Group enriched
Detected in many
kidney:
67.9
liver:
30.6
HOMER2
ENSSSCG00000001804
ENSG00000103942
Homer scaffolding protein 2
Tissue enhanced
Detected in many
salivary gland:
47.6
HOXB9
ENSSSCG00000039193
ENSG00000170689
Homeobox B9
Tissue enhanced
Detected in some
epididymis:
24.0
kidney:
24.0
large intestine:
28.2
male glands:
20.6
HPD
ENSSSCG00000009805
ENSG00000158104
4-hydroxyphenylpyruvate dioxygenase
Tissue enriched
Detected in some
liver:
217.9
HS3ST1
ENSSSCG00000021515
ENSG00000002587
Heparan sulfate-glucosamine 3-sulfotransferase 1
Tissue enhanced
Detected in many
cartilage:
54.1
epididymis:
32.4
HS3ST5
ENSSSCG00000004433
ENSG00000249853
Heparan sulfate-glucosamine 3-sulfotransferase 5
Tissue enhanced
Detected in many
adrenal gland:
11.0
brain:
21.2
ductus deferens:
14.5
kidney:
13.4
HSD17B13
ENSSSCG00000009225
ENSG00000170509
17-beta-hydroxysteroid dehydrogenase 13
Tissue enhanced
Detected in all
liver:
137.5
salivary gland:
76.8
HSD17B14
ENSSSCG00000003138
ENSG00000087076
Hydroxysteroid 17-beta dehydrogenase 14
Tissue enhanced
Detected in all
kidney:
90.5
liver:
62.6
HSF5
ENSSSCG00000017641
ENSG00000176160
Heat shock transcription factor 5
Tissue enriched
Detected in some
testis:
101.9
HSPA12A
ENSSSCG00000036758
ENSG00000165868
Heat shock protein family A (Hsp70) member 12A
Tissue enhanced
Detected in many
brain:
48.2
vagus nerve:
36.5
HTR1D
ENSSSCG00000025500
ENSG00000179546
5-hydroxytryptamine receptor 1D
Tissue enhanced
Detected in many
ovary:
25.9
testis:
20.4
HTR2B
ENSSSCG00000016273
ENSG00000135914
5-hydroxytryptamine receptor 2B
Low tissue specificity
Detected in all
HTR4
ENSSSCG00000014428
ENSG00000164270
5-hydroxytryptamine receptor 4
Tissue enhanced
Detected in many
epididymis:
23.1
lens:
25.9
small intestine:
32.0
testis:
33.2
HTRA3
ENSSSCG00000008723
ENSG00000170801
Serine protease HTRA3 precursor
Tissue enhanced
Detected in many
lens:
46.6
mesothelial tissue:
88.8
IDO2
ENSSSCG00000023054
ENSG00000188676
Indoleamine 2,3-dioxygenase 2
Group enriched
Detected in many
kidney:
25.2
liver:
48.2
upper respiratory system:
14.4
IFI6
ENSSSCG00000034570
ENSG00000126709
Interferon alpha inducible protein 6
Tissue enhanced
Detected in many
liver:
106.7
IFT88
ENSSSCG00000009270
ENSG00000032742
Intraflagellar transport 88
Low tissue specificity
Detected in all
IGF1
ENSSSCG00000000857
ENSG00000017427
Insulin-like growth factor I precursor
Tissue enhanced
Detected in many
adipose tissue:
73.1
IGSF11
ENSSSCG00000011906
ENSG00000144847
Immunoglobulin superfamily member 11
Tissue enhanced
Detected in many
brain:
36.0
retina:
13.2
vagus nerve:
14.8
IL11
ENSSSCG00000040725
ENSG00000095752
Interleukin 11
Tissue enriched
Detected in some
ovary:
130.1
ILDR2
ENSSSCG00000035124
ENSG00000143195
Immunoglobulin like domain containing receptor 2
Tissue enhanced
Detected in many
liver:
19.0
INHBB
ENSSSCG00000038610
ENSG00000163083
Inhibin beta B chain precursor
Tissue enhanced
Detected in all
breast:
21.8
mesothelial tissue:
22.0
INSRR
ENSSSCG00000006465
ENSG00000027644
Insulin receptor related receptor
Tissue enhanced
Detected in some
adrenal gland:
4.3
kidney:
16.6
ISM1
ENSSSCG00000007073
ENSG00000101230
Isthmin 1
Tissue enhanced
Detected in many
cartilage:
84.7
ITGB6
ENSSSCG00000015886
ENSG00000115221
Integrin beta-6 precursor
Tissue enhanced
Detected in many
epididymis:
22.6
heart:
30.6
skeletal muscle:
26.4
KBTBD11
ENSSSCG00000029796
ENSG00000176595
Kelch repeat and BTB domain containing 11
Tissue enhanced
Detected in many
brain:
24.7
kidney:
13.9
KCND2
ENSSSCG00000016621
ENSG00000184408
Potassium voltage-gated channel subfamily D member 2
Tissue enriched
Detected in many
brain:
79.7
KCNE4
ENSSSCG00000038149
ENSG00000152049
Potassium voltage-gated channel subfamily E regulatory subunit 4
Low tissue specificity
Detected in all
KCNJ15
ENSSSCG00000012066
ENSG00000157551
Potassium voltage-gated channel subfamily J member 15
Tissue enriched
Detected in many
kidney:
125.9
KCNJ18
ENSSSCG00000034773
ENSG00000260458
Potassium voltage-gated channel subfamily J member 18
Group enriched
Detected in many
brain:
21.1
lens:
77.9
skeletal muscle:
30.3
KCNMA1
ENSSSCG00000010325
ENSG00000156113
Calcium-activated potassium channel subunit alpha-1
Tissue enhanced
Detected in many
cervix:
87.5
pineal gland:
73.5
smooth muscle:
70.9
KCP
ENSSSCG00000016574
ENSG00000135253
Kielin/chordin-like protein
Tissue enhanced
Detected in many
epididymis:
63.0
kidney:
41.0
lymphoid tissue:
27.9
KHK
ENSSSCG00000008556
ENSG00000138030
Ketohexokinase
Tissue enhanced
Detected in all
liver:
63.4
small intestine:
45.8
KIAA0040
ENSSSCG00000040719
ENSG00000235750
KIAA0040
Tissue enhanced
Detected in many
cartilage:
42.1
kidney:
33.7
lymphoid tissue:
35.5
KIAA1211
ENSSSCG00000008903
ENSG00000109265
KIAA1211
Tissue enriched
Detected in many
epididymis:
89.8
« prev
| Page
of 19 |
next »
MENU
