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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
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Cancers
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Other congenital disorders
Other diseases
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Subclass
Class
Biological process
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Keyword
Chromosome
1
2
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6
7
8
9
10
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12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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43 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000012178
Tissue enhanced
Detected in all
male glands:
68.5
na
ENSSSCG00000012179
Low tissue specificity
Detected in many
na
ENSSSCG00000014688
Tissue enhanced
Detected in some
brain:
5.1
testis:
3.3
thyroid gland:
4.9
na
ENSSSCG00000014730
Tissue enhanced
Detected in some
brain:
2.1
testis:
2.8
thyroid gland:
2.6
na
ENSSSCG00000014740
ENSG00000176787
Tissue enhanced
Detected in some
brain:
1.4
testis:
3.7
thyroid gland:
2.1
na
ENSSSCG00000014745
ENSG00000205495
Tissue enhanced
Detected in some
brain:
1.5
testis:
2.2
thyroid gland:
5.0
na
ENSSSCG00000014746
ENSG00000205496
Tissue enhanced
Detected in some
brain:
1.8
testis:
3.2
thyroid gland:
2.7
na
ENSSSCG00000014747
Tissue enhanced
Detected in some
brain:
2.0
skin:
2.4
testis:
1.6
thyroid gland:
2.2
na
ENSSSCG00000014749
Tissue enhanced
Detected in some
brain:
1.5
testis:
2.2
thyroid gland:
2.0
na
ENSSSCG00000014755
Tissue enhanced
Detected in some
brain:
2.1
testis:
3.6
thyroid gland:
2.1
na
ENSSSCG00000014756
Tissue enhanced
Detected in some
pineal gland:
1.8
testis:
1.7
thyroid gland:
2.0
na
ENSSSCG00000014761
Tissue enriched
Detected in some
testis:
5.8
na
ENSSSCG00000014762
Tissue enhanced
Detected in some
brain:
1.9
testis:
2.7
thyroid gland:
1.7
na
ENSSSCG00000021141
Tissue enhanced
Detected in some
testis:
2.9
thyroid gland:
2.6
na
ENSSSCG00000021305
Low tissue specificity
Detected in many
na
ENSSSCG00000024353
Tissue enhanced
Detected in some
brain:
2.3
pineal gland:
2.0
testis:
3.5
thyroid gland:
1.7
na
ENSSSCG00000025253
ENSG00000183878
Low tissue specificity
Detected in all
na
ENSSSCG00000026430
ENSG00000067048
Low tissue specificity
Detected in many
na
ENSSSCG00000027046
Low tissue specificity
Detected in many
na
ENSSSCG00000031387
Tissue enhanced
Detected in some
brain:
1.5
testis:
3.3
thyroid gland:
2.7
na
ENSSSCG00000032354
ENSG00000012817
Tissue enhanced
Detected in many
epididymis:
23.2
na
ENSSSCG00000032426
Tissue enhanced
Detected in many
cornea:
9.1
na
ENSSSCG00000032661
Tissue enhanced
Detected in many
lens:
42.8
na
ENSSSCG00000032783
Tissue enhanced
Detected in some
brain:
2.0
testis:
3.2
thyroid gland:
1.8
na
ENSSSCG00000032930
Tissue enhanced
Detected in some
brain:
2.1
pineal gland:
1.8
testis:
1.7
thyroid gland:
2.0
na
ENSSSCG00000033734
Low tissue specificity
Detected in many
na
ENSSSCG00000033975
Tissue enhanced
Detected in some
pineal gland:
2.3
testis:
4.5
thyroid gland:
2.7
na
ENSSSCG00000034621
Tissue enhanced
Detected in some
skin:
1.9
testis:
2.0
na
ENSSSCG00000034666
Tissue enhanced
Detected in some
cartilage:
4.0
epididymis:
4.1
na
ENSSSCG00000035406
Tissue enhanced
Detected in some
epididymis:
3.7
pineal gland:
2.9
na
ENSSSCG00000035894
Tissue enhanced
Detected in many
male glands:
40.9
pineal gland:
38.9
na
ENSSSCG00000037114
ENSG00000205495
Tissue enhanced
Detected in some
pineal gland:
1.6
salivary gland:
1.5
testis:
2.1
na
ENSSSCG00000037464
Tissue enhanced
Detected in some
lens:
3.3
male glands:
2.9
na
ENSSSCG00000038249
Low tissue specificity
Detected in many
na
ENSSSCG00000039787
ENSG00000205495
Tissue enhanced
Detected in some
brain:
1.9
testis:
2.5
thyroid gland:
2.1
na
ENSSSCG00000040340
Tissue enhanced
Detected in some
brain:
3.2
testis:
4.8
thyroid gland:
3.3
OR51A7
ENSSSCG00000014752
ENSG00000176895
Olfactory receptor family 51 subfamily A member 7
Tissue enhanced
Detected in some
brain:
1.9
testis:
2.5
thyroid gland:
3.2
OR51F1
ENSSSCG00000014760
ENSG00000280021
Olfactory receptor family 51 subfamily F member 1 (gene/pseudogene)
Tissue enhanced
Detected in some
brain:
1.9
testis:
3.0
thyroid gland:
2.2
OR51F2
ENSSSCG00000014758
ENSG00000176925
Olfactory receptor family 51 subfamily F member 2
Tissue enhanced
Detected in some
testis:
1.7
thyroid gland:
4.0
OR51L1
ENSSSCG00000014748
ENSG00000176798
Olfactory receptor family 51 subfamily L member 1
Tissue enhanced
Detected in some
brain:
2.2
testis:
2.1
thyroid gland:
3.8
OR51S1
ENSSSCG00000014757
ENSG00000176922
Olfactory receptor family 51 subfamily S member 1
Tissue enhanced
Detected in some
brain:
2.6
testis:
3.3
thyroid gland:
1.9
OR51T1
ENSSSCG00000014754
ENSG00000176900
Olfactory receptor family 51 subfamily T member 1
Tissue enhanced
Detected in some
brain:
1.8
testis:
3.0
thyroid gland:
2.8
OR52R1
ENSSSCG00000014759
ENSG00000279270
Olfactory receptor family 52 subfamily R member 1 (gene/pseudogene)
Tissue enhanced
Detected in some
brain:
2.3
testis:
2.7
thyroid gland:
2.6
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