We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
249 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 5 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
FAM102A
ENSSSCG00000005631
ENSG00000167106
Family with sequence similarity 102 member A
Tissue enhanced
Detected in all
stomach:
91.3
FASLG
ENSSSCG00000022226
ENSG00000117560
Tumor necrosis factor ligand superfamily member 6
Tissue enhanced
Detected in all
lymphoid tissue:
16.0
stomach:
16.2
FCMR
ENSSSCG00000015656
ENSG00000162894
Fc fragment of IgM receptor
Tissue enhanced
Detected in many
lymphoid tissue:
71.2
stomach:
19.5
FGD3
ENSSSCG00000028185
ENSG00000127084
FYVE, RhoGEF and PH domain containing 3
Tissue enhanced
Detected in many
lymphoid tissue:
40.5
small intestine:
21.3
stomach:
32.6
FYB1
ENSSSCG00000016855
ENSG00000082074
FYN binding protein 1
Tissue enriched
Detected in all
lymphoid tissue:
145.6
GBP2
ENSSSCG00000006923
ENSG00000162645
Interferon-induced guanylate-binding protein 2
Tissue enhanced
Detected in all
small intestine:
38.8
stomach:
38.0
GFI1
ENSSSCG00000006902
ENSG00000162676
Growth factor independent 1 transcriptional repressor
Tissue enhanced
Detected in many
lymphoid tissue:
39.4
small intestine:
14.5
stomach:
23.7
GLIPR1
ENSSSCG00000000519
ENSG00000139278
GLI pathogenesis related 1
Tissue enhanced
Detected in all
large intestine:
29.0
GPR132
ENSSSCG00000036892
ENSG00000183484
G protein-coupled receptor 132
Tissue enhanced
Detected in many
lymphoid tissue:
17.2
stomach:
13.0
GPR15
ENSSSCG00000011979
ENSG00000154165
G protein-coupled receptor 15
Tissue enhanced
Detected in some
large intestine:
24.6
liver:
12.5
lymphoid tissue:
9.7
stomach:
9.6
GPR171
ENSSSCG00000036844
ENSG00000174946
G protein-coupled receptor 171
Tissue enhanced
Detected in all
choroid plexus:
28.1
GPR174
ENSSSCG00000021734
ENSG00000147138
G protein-coupled receptor 174
Tissue enhanced
Detected in many
lymphoid tissue:
34.9
GPR18
ENSSSCG00000031999
ENSG00000125245
G protein-coupled receptor 18
Tissue enhanced
Detected in many
lymphoid tissue:
34.8
GPR55
ENSSSCG00000035592
ENSG00000135898
G protein-coupled receptor 55
Tissue enhanced
Detected in some
large intestine:
7.5
lymphoid tissue:
9.0
small intestine:
6.9
stomach:
11.5
testis:
5.4
GRAP2
ENSSSCG00000000080
ENSG00000100351
GRB2-related adaptor protein 2
Tissue enhanced
Detected in all
lymphoid tissue:
44.2
GZMA
ENSSSCG00000016903
ENSG00000145649
Granzyme A precursor
Tissue enhanced
Detected in many
large intestine:
16.1
ovary:
21.1
small intestine:
12.3
GZMB
ENSSSCG00000001978
ENSG00000100450
Granzyme B precursor
Tissue enhanced
Detected in many
large intestine:
16.3
lymphoid tissue:
15.6
small intestine:
30.6
H2AFY
ENSSSCG00000014307
ENSG00000113648
Core histone macro-H2A.1 isoform 1
Low tissue specificity
Detected in all
HERC3
ENSSSCG00000009208
ENSG00000138641
HECT and RLD domain containing E3 ubiquitin protein ligase 3
Low tissue specificity
Detected in all
HLA-DOB
ENSSSCG00000001459
ENSG00000241106
MHC class II, DO beta precursor
Tissue enhanced
Detected in all
lymphoid tissue:
56.4
HPSE
ENSSSCG00000009237
ENSG00000173083
Heparanase precursor
Tissue enhanced
Detected in all
lymphoid tissue:
34.9
ICOS
ENSSSCG00000025042
ENSG00000163600
Tissue enhanced
Detected in some
large intestine:
7.4
lymphoid tissue:
24.6
stomach:
7.7
upper respiratory system:
7.3
IKBKE
ENSSSCG00000015644
ENSG00000263528
Inhibitor of nuclear factor kappa B kinase subunit epsilon
Tissue enhanced
Detected in many
lymphoid tissue:
23.4
stomach:
34.5
IKZF2
ENSSSCG00000016164
ENSG00000030419
IKAROS family zinc finger 2
Tissue enhanced
Detected in many
lymphoid tissue:
50.2
IKZF3
ENSSSCG00000017494
ENSG00000161405
IKAROS family zinc finger 3
Tissue enhanced
Detected in many
lung:
19.1
lymphoid tissue:
49.4
small intestine:
20.5
stomach:
22.2
upper respiratory system:
27.0
IL12A
ENSSSCG00000011730
ENSG00000168811
Interleukin-12 subunit alpha
Low tissue specificity
Detected in many
IL18RAP
ENSSSCG00000008157
ENSG00000115607
Interleukin 18 receptor accessory protein
Tissue enhanced
Detected in some
dura mater:
6.9
lymphoid tissue:
5.7
stomach:
4.3
IL24
ENSSSCG00000015655
ENSG00000162892
Interleukin 24
Tissue enriched
Detected in some
lymphoid tissue:
21.2
IL27RA
ENSSSCG00000013766
ENSG00000104998
Interleukin-27 receptor subunit alpha precursor
Tissue enhanced
Detected in many
lymphoid tissue:
36.5
ovary:
26.3
IL7
ENSSSCG00000006161
ENSG00000104432
Interleukin-7
Tissue enhanced
Detected in many
liver:
10.3
lymphoid tissue:
16.8
IL7R
ENSSSCG00000016832
ENSG00000168685
Interleukin-7 receptor subunit alpha precursor
Tissue enhanced
Detected in many
lymphoid tissue:
39.3
small intestine:
13.2
stomach:
16.2
INPP5B
ENSSSCG00000003642
ENSG00000204084
Inositol polyphosphate-5-phosphatase B
Low tissue specificity
Detected in all
ITGA4
ENSSSCG00000016009
ENSG00000115232
Integrin subunit alpha 4
Tissue enriched
Detected in many
lymphoid tissue:
63.2
ITGB7
ENSSSCG00000000257
ENSG00000139626
Integrin subunit beta 7
Tissue enhanced
Detected in many
lymphoid tissue:
36.0
stomach:
32.9
ITK
ENSSSCG00000038003
ENSG00000113263
IL2 inducible T cell kinase
Tissue enriched
Detected in many
lymphoid tissue:
43.4
JAML
ENSSSCG00000015089
ENSG00000160593
Junctional adhesion molecule-like precursor
Tissue enhanced
Detected in many
brain:
38.7
KDM1B
ENSSSCG00000001074
ENSG00000165097
Lysine demethylase 1B
Low tissue specificity
Detected in all
KDM4C
ENSSSCG00000005198
ENSG00000107077
Lysine demethylase 4C
Tissue enhanced
Detected in all
lymphoid tissue:
47.4
KLRK1
ENSSSCG00000040465
ENSG00000213809
NKG2-D type II integral membrane protein
Tissue enhanced
Detected in many
lymphoid tissue:
27.6
LAMP3
ENSSSCG00000026097
ENSG00000078081
Lysosomal associated membrane protein 3
Group enriched
Detected in many
lung:
97.7
lymphoid tissue:
55.1
LCK
ENSSSCG00000003608
ENSG00000182866
Tyrosine-protein kinase Lck
Tissue enriched
Detected in all
lymphoid tissue:
74.8
LIMD2
ENSSSCG00000040509
ENSG00000136490
LIM domain-containing protein 2
Tissue enhanced
Detected in many
lymphoid tissue:
51.5
LNPEP
ENSSSCG00000014173
ENSG00000113441
Leucyl-cystinyl aminopeptidase
Low tissue specificity
Detected in all
LPAR5
ENSSSCG00000000699
ENSG00000184574
Lysophosphatidic acid receptor 5
Tissue enhanced
Detected in many
lymphoid tissue:
23.0
stomach:
17.5
LRMP
ENSSSCG00000000563
ENSG00000118308
Lymphoid restricted membrane protein
Tissue enhanced
Detected in many
lymphoid tissue:
77.5
upper respiratory system:
34.9
LY9
ENSSSCG00000006375
ENSG00000122224
Lymphocyte antigen 9
Tissue enriched
Detected in many
lymphoid tissue:
54.7
MALT1
ENSSSCG00000004917
ENSG00000172175
MALT1 paracaspase
Low tissue specificity
Detected in all
MCPH1
ENSSSCG00000015754
ENSG00000147316
Microcephalin 1
Tissue enhanced
Detected in all
lymphoid tissue:
31.7
MMP25
ENSSSCG00000021569
ENSG00000008516
Matrix metallopeptidase 25
Tissue enhanced
Detected in many
lymphoid tissue:
20.0
stomach:
24.4
MYB
ENSSSCG00000004167
ENSG00000118513
MYB proto-oncogene, transcription factor
Tissue enriched
Detected in many
lymphoid tissue:
99.9
« prev
| Page
of 5 |
next »