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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Endocrine and metabolic diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Skin diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
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115 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000032065
Tissue enhanced
Detected in some
adipose tissue:
2.9
brain:
5.6
cornea:
6.1
mouth:
5.2
upper respiratory system:
2.4
na
ENSSSCG00000032139
Tissue enhanced
Detected in some
brain:
1.7
cornea:
7.3
fallopian tube:
2.9
thyroid gland:
2.4
upper respiratory system:
1.6
na
ENSSSCG00000032755
Tissue enhanced
Detected in many
mouth:
9.0
na
ENSSSCG00000033035
Tissue enhanced
Detected in many
aorta:
3.9
na
ENSSSCG00000034464
Low tissue specificity
Detected in many
na
ENSSSCG00000034466
Low tissue specificity
Detected in many
na
ENSSSCG00000034574
Tissue enhanced
Detected in some
cornea:
3.2
small intestine:
1.8
na
ENSSSCG00000034901
Tissue enhanced
Detected in many
breast:
8.1
cartilage:
10.7
male glands:
8.0
skin:
9.2
na
ENSSSCG00000035586
ENSG00000167759
Tissue enhanced
Detected in many
cornea:
24.1
mouth:
19.6
na
ENSSSCG00000035642
Tissue enhanced
Detected in some
adipose tissue:
2.9
brain:
5.6
cornea:
6.1
mouth:
5.2
upper respiratory system:
2.4
na
ENSSSCG00000035725
Tissue enriched
Detected in single
cornea:
2.6
na
ENSSSCG00000035885
Group enriched
Detected in many
cornea:
39.0
male glands:
30.0
mouth:
57.9
skin:
64.0
na
ENSSSCG00000036141
Tissue enhanced
Detected in some
cornea:
2.7
male glands:
1.0
na
ENSSSCG00000036479
Tissue enriched
Detected in some
cornea:
4.5
na
ENSSSCG00000036895
Tissue enhanced
Detected in single
cornea:
1.4
na
ENSSSCG00000037333
Not detected
Not detected
na
ENSSSCG00000037367
Tissue enhanced
Detected in some
cornea:
9.5
skin:
4.1
vagus nerve:
8.3
na
ENSSSCG00000037735
ENSG00000182782,ENSG00000255398
Tissue enhanced
Detected in many
cornea:
51.2
upper respiratory system:
14.3
na
ENSSSCG00000037743
Tissue enhanced
Detected in many
cornea:
24.3
na
ENSSSCG00000038163
Tissue enhanced
Detected in some
cornea:
7.3
vagus nerve:
9.9
na
ENSSSCG00000038655
Tissue enhanced
Detected in many
mouth:
6.9
na
ENSSSCG00000039127
Tissue enhanced
Detected in some
endometrium:
14.2
mesothelial tissue:
21.5
na
ENSSSCG00000039376
Tissue enriched
Detected in single
cornea:
2.5
na
ENSSSCG00000039806
Tissue enriched
Detected in some
cornea:
32.1
na
ENSSSCG00000040049
Tissue enriched
Detected in single
cornea:
5.2
na
ENSSSCG00000040104
Tissue enriched
Detected in single
cornea:
4.8
NMU
ENSSSCG00000027954
ENSG00000109255
Neuromedin U
Tissue enhanced
Detected in many
cornea:
21.5
OR4D1
ENSSSCG00000033200
ENSG00000141194
Olfactory receptor family 4 subfamily D member 1
Tissue enhanced
Detected in some
lymphoid tissue:
1.0
mouth:
2.0
OR52N5
ENSSSCG00000014656
ENSG00000181009
Olfactory receptor family 52 subfamily N member 5
Tissue enhanced
Detected in some
cornea:
3.8
epididymis:
1.5
PADI1
ENSSSCG00000003481
ENSG00000142623
Peptidyl arginine deiminase 1
Tissue enhanced
Detected in some
stomach:
23.5
upper respiratory system:
58.7
PAX3
ENSSSCG00000028418
ENSG00000135903
Paired box 3
Tissue enhanced
Detected in some
mouth:
18.8
pineal gland:
7.7
upper respiratory system:
37.7
PFKFB2
ENSSSCG00000015660
ENSG00000123836
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
Tissue enhanced
Detected in many
mouth:
32.0
skin:
57.4
PIK3C2G
ENSSSCG00000000591
ENSG00000139144
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
Tissue enhanced
Detected in many
cornea:
16.8
liver:
34.1
skin:
21.8
PKP1
ENSSSCG00000030694
ENSG00000081277
Plakophilin 1
Group enriched
Detected in some
cornea:
63.6
mouth:
72.7
skin:
70.8
PLEKHN1
ENSSSCG00000030505
ENSG00000187583
Pleckstrin homology domain containing N1
Group enriched
Detected in some
cornea:
18.6
mouth:
19.4
skin:
56.3
small intestine:
14.6
PRSS27
ENSSSCG00000008062
ENSG00000172382
Serine protease 27
Tissue enriched
Detected in some
mouth:
61.5
PSORS1C2
ENSSSCG00000034471
ENSG00000204538
Psoriasis susceptibility 1 candidate gene 2 protein precursor
Tissue enriched
Detected in many
skin:
114.0
RAB38
ENSSSCG00000033878
ENSG00000123892
RAB38, member RAS oncogene family
Tissue enhanced
Detected in all
pineal gland:
32.1
S100A12
ENSSSCG00000032857
ENSG00000163221
Protein S100-A12
Tissue enriched
Detected in some
cornea:
228.2
S100A8
ENSSSCG00000006590
ENSG00000143546
Protein S100-A8
Group enriched
Detected in some
cornea:
459.9
mouth:
180.6
S100A9
ENSSSCG00000006588
ENSG00000163220
RNA-binding region containing protein 2-like
Tissue enhanced
Detected in some
bone marrow:
31.5
cornea:
126.7
mouth:
117.6
SBSN
ENSSSCG00000033702
ENSG00000189001
Suprabasin
Tissue enhanced
Detected in many
cornea:
17.8
mouth:
52.8
skin:
25.2
SCEL
ENSSSCG00000009474
ENSG00000136155
Sciellin
Tissue enhanced
Detected in many
cornea:
18.9
mouth:
63.1
skin:
32.3
SERPINB10
ENSSSCG00000004889
ENSG00000242550
Serpin B10
Tissue enhanced
Detected in all
mouth:
23.4
skin:
30.9
SERPINB11
ENSSSCG00000022337
ENSG00000206072
Serpin family B member 11 (gene/pseudogene)
Tissue enhanced
Detected in all
mouth:
23.9
SERPINB5
ENSSSCG00000004894
ENSG00000206075
Serpin family B member 5
Group enriched
Detected in many
cornea:
99.2
mouth:
57.1
skin:
46.7
SOX15
ENSSSCG00000017954
ENSG00000129194
SRY-box 15
Tissue enhanced
Detected in many
cornea:
54.5
mouth:
23.5
STK35
ENSSSCG00000007179
ENSG00000125834
Serine/threonine kinase 35
Tissue enhanced
Detected in all
cornea:
97.0
lens:
36.3
SULT2B1
ENSSSCG00000023280
ENSG00000088002
Sulfotransferase family cytosolic 2B member 1
Tissue enhanced
Detected in many
ductus deferens:
19.4
mouth:
37.2
upper respiratory system:
26.7
TFAP2C
ENSSSCG00000007499
ENSG00000087510
Transcription factor AP-2 gamma
Tissue enhanced
Detected in many
cornea:
34.6
skin:
18.5
upper respiratory system:
16.4
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