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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
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16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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114 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000023406
ENSG00000169469,ENSG00000169474
Tissue enriched
Detected in some
mouth:
1031.1
na
ENSSSCG00000024281
Tissue enhanced
Detected in some
esophagus:
13.6
mouth:
56.4
skin:
16.0
na
ENSSSCG00000026339
ENSG00000188100,ENSG00000189090,ENSG00000276430
Tissue enriched
Detected in some
mouth:
170.0
na
ENSSSCG00000027025
Tissue enhanced
Detected in some
epididymis:
2.3
mouth:
3.6
skin:
9.2
na
ENSSSCG00000032120
Tissue enriched
Detected in single
gallbladder:
15.1
na
ENSSSCG00000032800
Tissue enhanced
Detected in single
skin:
1.1
na
ENSSSCG00000033182
Group enriched
Detected in some
mouth:
51.2
skin:
23.5
na
ENSSSCG00000033192
ENSG00000213022
Tissue enriched
Detected in some
mouth:
27.7
na
ENSSSCG00000033249
Tissue enhanced
Detected in some
male glands:
6.1
penis:
4.1
skin:
19.1
na
ENSSSCG00000033256
Group enriched
Detected in some
ductus deferens:
23.0
gallbladder:
16.0
skin:
10.3
na
ENSSSCG00000033473
Tissue enhanced
Detected in some
mouth:
3.1
skin:
12.0
thyroid gland:
4.2
na
ENSSSCG00000033560
Tissue enriched
Detected in some
mouth:
25.9
na
ENSSSCG00000033903
Tissue enriched
Detected in single
mouth:
12.1
na
ENSSSCG00000034134
Tissue enhanced
Detected in many
endometrium:
16.1
mouth:
9.0
na
ENSSSCG00000034279
ENSG00000204544
Group enriched
Detected in some
cornea:
119.5
mouth:
81.3
na
ENSSSCG00000034539
Tissue enriched
Detected in some
mouth:
335.8
na
ENSSSCG00000034563
Tissue enhanced
Detected in some
breast:
3.8
skin:
5.3
na
ENSSSCG00000034871
Tissue enhanced
Detected in single
mouth:
1.0
na
ENSSSCG00000034915
Tissue enhanced
Detected in some
breast:
2.5
cartilage:
2.8
fallopian tube:
3.4
mouth:
3.2
na
ENSSSCG00000035083
ENSG00000185176
Tissue enhanced
Detected in some
mouth:
6.6
urinary bladder:
2.6
na
ENSSSCG00000035334
Tissue enriched
Detected in some
mouth:
378.5
na
ENSSSCG00000036133
Tissue enhanced
Detected in some
cornea:
4.8
mouth:
7.6
small intestine:
6.1
na
ENSSSCG00000036539
Tissue enhanced
Detected in some
bone marrow:
1.1
cornea:
1.3
epididymis:
2.0
skin:
1.7
na
ENSSSCG00000036591
Not detected
Not detected
na
ENSSSCG00000036692
Tissue enhanced
Detected in some
breast:
2.3
mouth:
1.6
na
ENSSSCG00000036764
Tissue enriched
Detected in some
skin:
155.7
na
ENSSSCG00000037064
Tissue enhanced
Detected in some
adipose tissue:
5.8
mouth:
12.9
skin:
29.5
na
ENSSSCG00000037574
Tissue enhanced
Detected in some
cartilage:
5.4
mouth:
11.4
na
ENSSSCG00000037587
Tissue enhanced
Detected in some
adipose tissue:
2.3
choroid plexus:
2.4
heart:
6.0
kidney:
2.8
mouth:
3.6
pituitary gland:
2.5
na
ENSSSCG00000037879
Galectin-7
Tissue enhanced
Detected in some
esophagus:
16.6
mouth:
78.2
skin:
54.2
na
ENSSSCG00000038127
Tissue enhanced
Detected in some
mouth:
39.5
skin:
7.4
testis:
14.6
na
ENSSSCG00000038557
Tissue enhanced
Detected in some
mouth:
1.9
na
ENSSSCG00000039352
Tissue enriched
Detected in some
mouth:
28.9
na
ENSSSCG00000039464
Tissue enhanced
Detected in some
choroid plexus:
4.0
mouth:
5.2
na
ENSSSCG00000039572
Tissue enhanced
Detected in some
mouth:
2.1
penis:
1.9
na
ENSSSCG00000039992
Tissue enhanced
Detected in some
mouth:
1.4
skin:
1.2
na
ENSSSCG00000040051
Tissue enriched
Detected in some
mouth:
53.2
na
ENSSSCG00000040304
Tissue enhanced
Detected in some
breast:
3.3
epididymis:
3.7
mouth:
3.7
na
ENSSSCG00000040489
Tissue enhanced
Detected in many
breast:
7.4
epididymis:
6.8
fallopian tube:
19.3
NODAL
ENSSSCG00000039399
ENSG00000156574
Nodal growth differentiation factor
Tissue enhanced
Detected in many
cartilage:
7.2
OR52B2
ENSSSCG00000014635
ENSG00000255307
Olfactory receptor family 52 subfamily B member 2
Tissue enhanced
Detected in many
breast:
8.1
cartilage:
9.8
fallopian tube:
11.8
OR5B21
ENSSSCG00000013157
ENSG00000198283
Olfactory receptor family 5 subfamily B member 21
Tissue enhanced
Detected in single
testis:
1.6
PADI3
ENSSSCG00000003482
ENSG00000142619
Peptidyl arginine deiminase 3
Group enriched
Detected in some
cornea:
18.0
skin:
30.9
PLA2G4D
ENSSSCG00000004733
ENSG00000159337
Phospholipase A2 group IVD
Group enriched
Detected in some
mouth:
7.1
skin:
16.7
testis:
8.0
PNPLA1
ENSSSCG00000001559
ENSG00000180316
Patatin like phospholipase domain containing 1
Tissue enriched
Detected in some
skin:
26.6
RHCG
ENSSSCG00000001841
ENSG00000140519
Ammonium transporter Rh type C
Tissue enhanced
Detected in many
kidney:
19.8
mouth:
44.9
ovary:
27.8
RNF224
ENSSSCG00000005856
ENSG00000233198
Ring finger protein 224
Tissue enhanced
Detected in many
esophagus:
10.1
mouth:
30.1
RSPO4
ENSSSCG00000007197
ENSG00000101282
R-spondin 4
Tissue enriched
Detected in some
synovial tissue:
33.8
SERPINA12
ENSSSCG00000002478
ENSG00000165953
Serpin family A member 12
Tissue enhanced
Detected in some
mouth:
2.3
skin:
5.4
testis:
2.3
thyroid gland:
2.1
SERPINB12
ENSSSCG00000039151
ENSG00000166634
Serpin family B member 12
Tissue enriched
Detected in some
mouth:
53.8
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