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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
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5
6
7
8
9
10
11
12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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99 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000037555
Tissue enhanced
Detected in many
mesothelial tissue:
32.3
na
ENSSSCG00000037703
Tissue enriched
Detected in some
heart:
11.9
na
ENSSSCG00000037863
Tissue enhanced
Detected in many
aorta:
5.3
heart:
8.9
na
ENSSSCG00000037882
Tissue enhanced
Detected in some
heart:
11.8
stomach:
9.7
na
ENSSSCG00000037928
Tissue enriched
Detected in some
heart:
32.9
na
ENSSSCG00000038174
Tissue enhanced
Detected in single
heart:
2.4
na
ENSSSCG00000038225
Low tissue specificity
Detected in many
na
ENSSSCG00000038281
ENSG00000156265
Low tissue specificity
Detected in all
na
ENSSSCG00000039584
Tissue enriched
Detected in some
heart:
12.6
na
ENSSSCG00000039585
Tissue enriched
Detected in many
heart:
38.1
na
ENSSSCG00000039825
ENSG00000184601
Tissue enriched
Detected in some
heart:
141.9
na
ENSSSCG00000039877
Tissue enhanced
Detected in all
heart:
30.7
na
ENSSSCG00000039919
Low tissue specificity
Detected in many
na
ENSSSCG00000039951
Tissue enhanced
Detected in many
choroid plexus:
4.9
heart:
4.8
lymphoid tissue:
5.6
na
ENSSSCG00000040033
Group enriched
Detected in some
heart:
9.8
testis:
5.9
na
ENSSSCG00000040109
ENSG00000116783,ENSG00000259030
Tissue enriched
Detected in some
heart:
64.1
na
ENSSSCG00000040231
Tissue enhanced
Detected in many
fallopian tube:
10.4
heart:
6.8
lens:
6.3
na
ENSSSCG00000040285
Low tissue specificity
Detected in many
na
ENSSSCG00000040357
Tissue enhanced
Detected in all
skeletal muscle:
68.7
na
ENSSSCG00000040606
Tissue enriched
Detected in some
heart:
105.2
na
ENSSSCG00000040670
Tissue enhanced
Detected in many
male glands:
20.8
NAV2
ENSSSCG00000013351
ENSG00000166833
Neuron navigator 2
Low tissue specificity
Detected in all
NEU3
ENSSSCG00000021638
ENSG00000162139
Neuraminidase 3
Low tissue specificity
Detected in all
NKX2-5
ENSSSCG00000036285
ENSG00000183072
NK2 homeobox 5
Tissue enriched
Detected in some
heart:
34.6
NPPA
ENSSSCG00000003430
ENSG00000175206
Natriuretic peptides A precursor
Tissue enriched
Detected in some
heart:
932.9
NPPB
ENSSSCG00000003431
ENSG00000120937
Natriuretic peptides B Brain natriuretic peptide 32 Brain natriuretic peptide 26
Tissue enriched
Detected in some
heart:
105.4
OR6M1
ENSSSCG00000031094
ENSG00000196099
Olfactory receptor family 6 subfamily M member 1
Tissue enriched
Detected in single
heart:
4.5
OR6X1
ENSSSCG00000015146
ENSG00000221931
Olfactory receptor family 6 subfamily X member 1
Tissue enhanced
Detected in some
heart:
3.9
mesothelial tissue:
3.8
OXTR
ENSSSCG00000021585
ENSG00000180914
Oxytocin receptor
Tissue enhanced
Detected in all
ovary:
28.2
PDIA2
ENSSSCG00000007983
ENSG00000185615
Protein disulfide isomerase family A member 2
Group enriched
Detected in some
heart:
31.2
stomach:
21.0
PLAG1
ENSSSCG00000006247
ENSG00000181690
PLAG1 zinc finger
Low tissue specificity
Detected in many
PRKAG3
ENSSSCG00000016200
ENSG00000115592
5'-AMP-activated protein kinase subunit gamma-3
Tissue enhanced
Detected in all
salivary gland:
28.1
PTGES2
ENSSSCG00000022655
ENSG00000148334
Prostaglandin E synthase 2
Low tissue specificity
Detected in all
RNF207
ENSSSCG00000003368
ENSG00000158286
Ring finger protein 207
Tissue enriched
Detected in some
heart:
44.2
SCN5A
ENSSSCG00000011259
ENSG00000183873
Sodium voltage-gated channel alpha subunit 5
Tissue enriched
Detected in some
heart:
45.8
SGCA
ENSSSCG00000017583
ENSG00000108823
Alpha-sarcoglycan precursor
Tissue enhanced
Detected in all
skeletal muscle:
50.7
SLC19A2
ENSSSCG00000006290
ENSG00000117479
Thiamine transporter 1
Low tissue specificity
Detected in all
SMCO1
ENSSSCG00000031614
ENSG00000214097
Single-pass membrane protein with coiled-coil domains 1
Low tissue specificity
Detected in all
TBX20
ENSSSCG00000016662
ENSG00000164532
T-box 20
Tissue enriched
Detected in some
heart:
66.9
TBX5
ENSSSCG00000009867
ENSG00000089225
T-box 5
Tissue enriched
Detected in some
heart:
65.3
TMEM159
ENSSSCG00000031876
ENSG00000011638
Transmembrane protein 159
Low tissue specificity
Detected in all
TNNI3
ENSSSCG00000024505
ENSG00000129991
Troponin I, cardiac muscle
Tissue enriched
Detected in some
heart:
453.3
TNNT2
ENSSSCG00000023031
ENSG00000118194
Troponin T, cardiac muscle isoform 6
Tissue enriched
Detected in some
heart:
578.7
TRIM45
ENSSSCG00000006732
ENSG00000134253
Tripartite motif containing 45
Low tissue specificity
Detected in all
TRIM63
ENSSSCG00000027684
ENSG00000158022
E3 ubiquitin-protein ligase TRIM63
Group enriched
Detected in all
heart:
30.9
skeletal muscle:
48.3
TWF2
ENSSSCG00000011435
ENSG00000247596
Twinfilin actin binding protein 2
Low tissue specificity
Detected in all
UNC45B
ENSSSCG00000017717
ENSG00000141161
Protein unc-45 homolog B
Tissue enhanced
Detected in all
heart:
26.3
skeletal muscle:
52.2
UTS2R
ENSSSCG00000033221
ENSG00000181408
Urotensin 2 receptor
Group enriched
Detected in some
cartilage:
6.3
endometrium:
5.3
heart:
10.4
lung:
6.1
synovial tissue:
9.6
ZNF235
ENSSSCG00000022434
ENSG00000159917
Zinc finger protein 235
Tissue enhanced
Detected in all
heart:
20.9
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