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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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179 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000040753
Group enriched
Detected in some
ductus deferens:
93.6
epididymis:
115.5
na
ENSSSCG00000040756
ENSG00000119782
Tissue enhanced
Detected in some
brain:
1.7
epididymis:
4.8
testis:
3.7
na
ENSSSCG00000040894
ENSG00000184276
Tissue enriched
Detected in single
epididymis:
21.9
na
ENSSSCG00000040932
Tissue enriched
Detected in some
epididymis:
14.4
na
ENSSSCG00000040966
Tissue enhanced
Detected in some
epididymis:
6.4
thyroid gland:
1.8
OR2D2
ENSSSCG00000031270
ENSG00000166368
Olfactory receptor family 2 subfamily D member 2
Tissue enhanced
Detected in many
epididymis:
12.4
male glands:
6.8
OR4D6
ENSSSCG00000039507
ENSG00000166884
Olfactory receptor family 4 subfamily D member 6
Tissue enhanced
Detected in some
esophagus:
1.2
male glands:
2.0
OR6A2
ENSSSCG00000014617
ENSG00000184933
Olfactory receptor family 6 subfamily A member 2
Low tissue specificity
Detected in many
OR9Q1
ENSSSCG00000031726
ENSG00000186509
Olfactory receptor family 9 subfamily Q member 1
Tissue enhanced
Detected in single
epididymis:
2.2
P2RX3
ENSSSCG00000029468
ENSG00000109991
Purinergic receptor P2X 3
Tissue enriched
Detected in some
pineal gland:
41.8
PATE1
ENSSSCG00000040952
ENSG00000171053
Prostate and testis expressed 1
Tissue enriched
Detected in single
epididymis:
99.3
PATE2
ENSSSCG00000038721
ENSG00000196844
Prostate and testis expressed 2
Tissue enriched
Detected in some
epididymis:
64.2
PATE3
ENSSSCG00000015221
ENSG00000236027
Prostate and testis expressed 3
Tissue enriched
Detected in some
epididymis:
75.4
PROKR1
ENSSSCG00000038148
ENSG00000169618
Prokineticin receptor 1
Tissue enriched
Detected in some
epididymis:
37.2
PSP-II
ENSSSCG00000002978
Major seminal plasma glycoprotein PSP-II precursor
Tissue enriched
Detected in some
male glands:
3633.2
RASD1
ENSSSCG00000034044
ENSG00000108551
Ras related dexamethasone induced 1
Tissue enhanced
Detected in all
epididymis:
28.4
male glands:
47.4
RBBP7
ENSSSCG00000012149
ENSG00000102054
RB binding protein 7, chromatin remodeling factor
Tissue enhanced
Detected in all
epididymis:
71.7
SLC30A2
ENSSSCG00000026386
ENSG00000158014
Zinc transporter 2
Tissue enriched
Detected in some
male glands:
158.7
SLC46A2
ENSSSCG00000005472
ENSG00000119457
Solute carrier family 46 member 2
Tissue enriched
Detected in many
epididymis:
84.4
SLC6A2
ENSSSCG00000002827
ENSG00000103546
Solute carrier family 6 member 2
Tissue enhanced
Detected in many
brain:
20.9
epididymis:
20.1
lung:
11.6
male glands:
23.6
SPAG11
ENSSSCG00000029743
Sperm associated antigen 11
Tissue enriched
Detected in some
epididymis:
234.6
SPINK14
ENSSSCG00000033173
ENSG00000196800
Serine peptidase inhibitor, Kazal type 14 (putative)
Tissue enriched
Detected in some
ductus deferens:
155.6
SPMI
ENSSSCG00000002977
Seminal plasma sperm motility inhibitor precursor
Tissue enriched
Detected in some
male glands:
2013.1
TEDDM1
ENSSSCG00000015546
ENSG00000203730
Transmembrane epididymal protein 1
Tissue enriched
Detected in some
epididymis:
58.3
TRIM10
ENSSSCG00000001234
ENSG00000204613
Tripartite motif-containing protein 10
Tissue enhanced
Detected in many
dura mater:
8.6
male glands:
13.1
testis:
9.4
VPS26B
ENSSSCG00000028123
Vacuolar protein sorting-associated protein 26B
Tissue enriched
Detected in all
epididymis:
263.1
WFDC10A
ENSSSCG00000029121
ENSG00000180305
WAP four-disulfide core domain 10A
Group enriched
Detected in some
ductus deferens:
130.1
epididymis:
430.8
WFDC8
ENSSSCG00000007407
ENSG00000158901
WAP four-disulfide core domain 8
Tissue enriched
Detected in some
epididymis:
61.9
WFDC9
ENSSSCG00000007408
ENSG00000180205
WAP four-disulfide core domain 9
Tissue enriched
Detected in some
epididymis:
132.7
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