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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other diseases
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Subclass
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Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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101 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000031218
Tissue enhanced
Detected in some
male glands:
2.8
skeletal muscle:
1.6
skin:
1.4
testis:
4.6
na
ENSSSCG00000031366
Tissue enhanced
Detected in some
breast:
2.7
male glands:
3.8
testis:
6.9
na
ENSSSCG00000031896
Group enriched
Detected in some
lymphoid tissue:
2.1
testis:
6.1
na
ENSSSCG00000031996
Tissue enriched
Detected in some
testis:
6.8
na
ENSSSCG00000032318
Tissue enhanced
Detected in some
ductus deferens:
3.2
testis:
5.3
vagus nerve:
8.9
na
ENSSSCG00000032704
Tissue enhanced
Detected in some
lymphoid tissue:
3.5
testis:
5.1
na
ENSSSCG00000032837
Tissue enhanced
Detected in some
lymphoid tissue:
2.4
stomach:
2.1
testis:
6.3
na
ENSSSCG00000032880
ENSG00000176253
Tissue enriched
Detected in some
testis:
4.8
na
ENSSSCG00000033050
Tissue enriched
Detected in some
testis:
49.9
na
ENSSSCG00000033371
Tissue enhanced
Detected in some
esophagus:
1.5
gallbladder:
1.0
stomach:
1.5
testis:
3.4
na
ENSSSCG00000033418
Tissue enhanced
Detected in some
salivary gland:
1.0
testis:
1.5
na
ENSSSCG00000033670
Tissue enhanced
Detected in some
kidney:
1.4
pineal gland:
1.1
testis:
1.7
na
ENSSSCG00000034273
Group enriched
Detected in some
large intestine:
1.4
testis:
1.9
na
ENSSSCG00000034475
Tissue enriched
Detected in some
testis:
40.1
na
ENSSSCG00000034796
Tissue enriched
Detected in some
testis:
7.8
na
ENSSSCG00000034933
Tissue enhanced
Detected in some
breast:
3.1
ovary:
2.7
salivary gland:
2.2
stomach:
2.3
testis:
5.3
na
ENSSSCG00000035128
Tissue enhanced
Detected in some
epididymis:
1.6
stomach:
1.3
testis:
2.8
na
ENSSSCG00000036037
Group enriched
Detected in some
lymphoid tissue:
4.1
testis:
7.5
na
ENSSSCG00000036230
Tissue enriched
Detected in some
testis:
8.5
na
ENSSSCG00000037409
ENSG00000149554
Group enriched
Detected in some
epididymis:
1.0
salivary gland:
3.7
testis:
3.2
na
ENSSSCG00000037415
Tissue enhanced
Detected in some
testis:
6.9
na
ENSSSCG00000037651
Tissue enriched
Detected in some
testis:
6.7
na
ENSSSCG00000037667
Tissue enhanced
Detected in some
cartilage:
7.1
testis:
10.7
na
ENSSSCG00000037938
Tissue enriched
Detected in some
testis:
40.1
na
ENSSSCG00000038099
Tissue enriched
Detected in many
testis:
57.2
na
ENSSSCG00000038264
ENSG00000063127
Tissue enriched
Detected in some
testis:
65.9
na
ENSSSCG00000038689
Tissue enriched
Detected in single
salivary gland:
2.7
na
ENSSSCG00000039131
ENSG00000154813
Tissue enhanced
Detected in some
lymphoid tissue:
9.5
testis:
29.4
na
ENSSSCG00000039764
Tissue enriched
Detected in some
testis:
40.1
na
ENSSSCG00000039937
Group enriched
Detected in some
stomach:
2.3
testis:
2.5
na
ENSSSCG00000039954
Tissue enriched
Detected in single
testis:
2.0
na
ENSSSCG00000040225
Tissue enhanced
Detected in many
testis:
7.5
na
ENSSSCG00000040868
Tissue enhanced
Detected in single
testis:
1.8
NLRP9
ENSSSCG00000003307
ENSG00000185792
NLR family pyrin domain containing 9
Group enriched
Detected in some
ovary:
3.6
testis:
1.7
NME8
ENSSSCG00000015448
ENSG00000086288
NME/NM23 family member 8
Tissue enriched
Detected in some
testis:
51.9
OPN4
ENSSSCG00000010358
ENSG00000122375
Opsin 4
Group enriched
Detected in some
endometrium:
8.2
testis:
29.8
thyroid gland:
26.0
OR10C1
ENSSSCG00000033935
ENSG00000206474
Olfactory receptor family 10 subfamily C member 1 (gene/pseudogene)
Tissue enriched
Detected in some
testis:
11.9
P14ARF
ENSSSCG00000005134
ENSG00000147889
P14ARF protein
Tissue enriched
Detected in many
testis:
66.5
PHKG2
ENSSSCG00000007788
ENSG00000156873
Phosphorylase b kinase gamma catalytic chain, liver/testis isoform
Tissue enriched
Detected in all
testis:
113.5
POLN
ENSSSCG00000008684
ENSG00000130997
DNA polymerase nu
Group enriched
Detected in many
lymphoid tissue:
23.4
testis:
24.9
PRAME
ENSSSCG00000036408
ENSG00000185686
Preferentially expressed antigen in melanoma
Tissue enriched
Detected in some
testis:
6.6
SCART1
ENSSSCG00000010787
ENSG00000214279
Scavenger receptor family member expressed on T cells 1
Group enriched
Detected in some
lymphoid tissue:
5.8
testis:
12.5
SHCBP1L
ENSSSCG00000026983
ENSG00000157060
SHC binding and spindle associated 1 like
Tissue enriched
Detected in many
testis:
77.2
SLC18A1
ENSSSCG00000009601
ENSG00000036565
Solute carrier family 18 member A1
Tissue enhanced
Detected in many
adrenal gland:
26.0
lymphoid tissue:
12.0
TMIGD3
ENSSSCG00000006787
ENSG00000121933
Transmembrane and immunoglobulin domain containing 3 isoform 2 precursor
Tissue enriched
Detected in some
testis:
110.8
UMODL1
ENSSSCG00000022290
ENSG00000177398
Uromodulin like 1
Tissue enhanced
Detected in many
male glands:
6.5
testis:
6.1
USP44
ENSSSCG00000021307
ENSG00000136014
Ubiquitin specific peptidase 44
Tissue enriched
Detected in some
testis:
38.4
ZBTB32
ENSSSCG00000002908
ENSG00000011590
Zinc finger and BTB domain containing 32
Tissue enriched
Detected in some
testis:
49.4
ZDHHC19
ENSSSCG00000011847
ENSG00000163958
Zinc finger DHHC-type containing 19
Tissue enhanced
Detected in many
testis:
31.7
ZNF541
ENSSSCG00000003119
ENSG00000118156
Zinc finger protein 541
Tissue enriched
Detected in some
testis:
46.4
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