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Gene name
Human disease related genes
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UMAP gene cluster
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Chromosome
1
2
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8
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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25 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000025885
ENSG00000179914
Intelectin-2-like precursor
Group enriched
Detected in many
large intestine:
26.7
small intestine:
21.6
upper respiratory system:
77.6
CYP2A19
ENSSSCG00000002993
ENSG00000197838,ENSG00000255974
Cytochrome P450 2A19
Group enriched
Detected in many
kidney:
186.8
liver:
187.0
upper respiratory system:
177.8
LTF
ENSSSCG00000029879
ENSG00000012223
Lactotransferrin precursor
Group enriched
Detected in many
epididymis:
127.0
upper respiratory system:
186.6
CLDN22
ENSSSCG00000027901
Claudin-22
Group enriched
Detected in many
endometrium:
20.8
esophagus:
15.0
male glands:
30.8
salivary gland:
47.0
upper respiratory system:
24.4
VMO1
ENSSSCG00000017915
ENSG00000182853
Vitelline membrane outer layer protein 1 homolog precursor
Group enriched
Detected in many
salivary gland:
21.5
upper respiratory system:
61.2
na
ENSSSCG00000037009
Group enriched
Detected in many
bone marrow:
67.3
lung:
134.6
lymphoid tissue:
133.2
upper respiratory system:
248.8
CDHR4
ENSSSCG00000011391
ENSG00000187492
Cadherin related family member 4
Group enriched
Detected in many
fallopian tube:
41.1
lung:
14.6
upper respiratory system:
25.4
DUOX2
ENSSSCG00000004678
ENSG00000140279
Dual oxidase 2 precursor
Group enriched
Detected in many
gallbladder:
21.4
large intestine:
37.0
stomach:
52.0
thyroid gland:
72.5
upper respiratory system:
24.4
IDO2
ENSSSCG00000023054
ENSG00000188676
Indoleamine 2,3-dioxygenase 2
Group enriched
Detected in many
kidney:
25.2
liver:
48.2
upper respiratory system:
14.4
IQCG
ENSSSCG00000011855
ENSG00000114473
IQ motif containing G
Group enriched
Detected in many
fallopian tube:
26.5
lung:
10.1
testis:
38.2
upper respiratory system:
15.2
KRT23
ENSSSCG00000024067
ENSG00000108244
Keratin 23
Group enriched
Detected in many
male glands:
46.0
salivary gland:
55.0
upper respiratory system:
26.1
MGAM2
ENSSSCG00000016487
ENSG00000257743
Maltase-glucoamylase 2 (putative)
Group enriched
Detected in many
large intestine:
42.9
small intestine:
31.3
upper respiratory system:
32.8
PROM1
ENSSSCG00000008745
ENSG00000007062
Prominin 1
Group enriched
Detected in many
male glands:
120.2
retina:
46.7
upper respiratory system:
41.6
TFF3
ENSSSCG00000022857
ENSG00000160180
Trefoil factor 3 precursor
Group enriched
Detected in many
male glands:
394.8
upper respiratory system:
123.4
ATP6V0A4
ENSSSCG00000016516
ENSG00000105929
ATPase H+ transporting V0 subunit a4
Group enriched
Detected in many
kidney:
38.1
salivary gland:
24.9
upper respiratory system:
22.4
CBR2
ENSSSCG00000031851
Carbonyl reductase
Group enriched
Detected in many
liver:
177.7
lung:
292.2
upper respiratory system:
105.0
FAM166B
ENSSSCG00000005309
ENSG00000215187
Protein FAM166B
Group enriched
Detected in many
fallopian tube:
46.2
upper respiratory system:
48.2
GCNT3
ENSSSCG00000004584
ENSG00000140297
Glucosaminyl (N-acetyl) transferase 3, mucin type
Group enriched
Detected in many
large intestine:
19.1
small intestine:
52.3
stomach:
44.3
upper respiratory system:
30.6
IL17C
ENSSSCG00000040406
ENSG00000124391
Interleukin 17C
Group enriched
Detected in many
stomach:
30.5
upper respiratory system:
11.9
na
ENSSSCG00000015433
ENSG00000128536
Group enriched
Detected in many
fallopian tube:
60.4
lung:
16.1
upper respiratory system:
25.3
na
ENSSSCG00000034036
ENSG00000260220
Group enriched
Detected in many
fallopian tube:
32.5
lung:
26.1
testis:
42.2
upper respiratory system:
21.9
na
ENSSSCG00000035016
Group enriched
Detected in many
stomach:
33.8
upper respiratory system:
32.4
na
ENSSSCG00000036369
Group enriched
Detected in many
esophagus:
10.3
male glands:
32.0
salivary gland:
28.2
upper respiratory system:
12.9
PADI2
ENSSSCG00000026478
ENSG00000117115
Peptidyl arginine deiminase 2
Group enriched
Detected in many
brain:
110.3
upper respiratory system:
33.2
TSPAN1
ENSSSCG00000003908
ENSG00000117472
Tetraspanin-1
Group enriched
Detected in many
large intestine:
150.0
male glands:
58.1
stomach:
183.8
upper respiratory system:
104.3
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