We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
621 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
Page
of 13 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
AADACL4
ENSSSCG00000003440
ENSG00000204518
Arylacetamide deacetylase like 4
Tissue enhanced
Detected in some
choroid plexus:
2.1
mouth:
1.9
testis:
3.6
AARD
ENSSSCG00000006013
ENSG00000205002
Alanine and arginine rich domain containing protein
Tissue enhanced
Detected in some
choroid plexus:
22.4
lymphoid tissue:
11.8
testis:
20.4
ABCA12
ENSSSCG00000034282
ENSG00000144452
ATP binding cassette subfamily A member 12
Tissue enhanced
Detected in some
epididymis:
8.7
large intestine:
17.5
skin:
26.0
testis:
6.2
ACP7
ENSSSCG00000002971
ENSG00000183760
Acid phosphatase 7, tartrate resistant (putative)
Tissue enhanced
Detected in some
mouth:
2.9
skin:
12.1
testis:
5.2
ACTL6B
ENSSSCG00000007670
ENSG00000077080
Actin like 6B
Tissue enhanced
Detected in some
brain:
12.7
liver:
11.1
pituitary gland:
8.3
testis:
5.6
ADTRP
ENSSSCG00000001048
ENSG00000111863
Androgen dependent TFPI regulating protein
Tissue enhanced
Detected in some
large intestine:
14.1
liver:
43.4
testis:
18.6
ALK
ENSSSCG00000008533
ENSG00000171094
ALK receptor tyrosine kinase
Tissue enhanced
Detected in some
brain:
5.5
choroid plexus:
7.7
pituitary gland:
8.0
testis:
13.0
ANKEF1
ENSSSCG00000007063
ENSG00000132623
Ankyrin repeat and EF-hand domain containing 1
Tissue enhanced
Detected in some
male glands:
18.0
testis:
35.6
APOBEC4
ENSSSCG00000015561
ENSG00000173627
Apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4
Tissue enhanced
Detected in some
fallopian tube:
31.9
lung:
10.4
testis:
8.9
upper respiratory system:
19.0
ASB12
ENSSSCG00000032889
ENSG00000198881
Ankyrin repeat and SOCS box containing 12
Tissue enhanced
Detected in some
heart:
8.8
skeletal muscle:
43.3
testis:
12.5
BAAT
ENSSSCG00000035245
ENSG00000136881
Bile acid-CoA:amino acid N-acyltransferase
Tissue enhanced
Detected in some
fallopian tube:
3.1
testis:
7.5
C10orf90
ENSSSCG00000010747
ENSG00000154493
Chromosome 10 open reading frame 90
Tissue enhanced
Detected in some
brain:
39.2
skin:
14.2
testis:
35.6
C11orf88
ENSSSCG00000015021
ENSG00000183644
Chromosome 11 open reading frame 88
Tissue enhanced
Detected in some
choroid plexus:
19.9
fallopian tube:
35.8
lung:
16.1
testis:
25.1
upper respiratory system:
28.2
C1orf189
ENSSSCG00000006555
ENSG00000163263
Chromosome 1 open reading frame 189
Tissue enhanced
Detected in some
fallopian tube:
41.3
testis:
76.4
upper respiratory system:
63.5
C6orf118
ENSSSCG00000004028
ENSG00000112539
Chromosome 6 open reading frame 118
Tissue enhanced
Detected in some
choroid plexus:
20.7
fallopian tube:
37.1
testis:
23.9
upper respiratory system:
17.7
CCDC17
ENSSSCG00000021448
ENSG00000159588
Coiled-coil domain containing 17
Tissue enhanced
Detected in some
fallopian tube:
24.9
lung:
20.0
testis:
21.4
upper respiratory system:
25.7
CCDC184
ENSSSCG00000039340
ENSG00000177875
Coiled-coil domain containing 184
Tissue enhanced
Detected in some
brain:
18.8
pituitary gland:
13.3
retina:
5.3
testis:
6.0
CCDC40
ENSSSCG00000017158
ENSG00000141519
Coiled-coil domain containing 40
Tissue enhanced
Detected in some
fallopian tube:
26.3
lung:
12.8
testis:
16.3
upper respiratory system:
19.8
CCNA1
ENSSSCG00000009354
ENSG00000133101
Cyclin A1
Tissue enhanced
Detected in some
fallopian tube:
28.1
testis:
31.3
upper respiratory system:
27.0
CELSR3
ENSSSCG00000011360
ENSG00000008300
Cadherin EGF LAG seven-pass G-type receptor 3
Tissue enhanced
Detected in some
brain:
16.7
pituitary gland:
9.2
retina:
9.7
testis:
16.2
CEP72
ENSSSCG00000031800
ENSG00000112877
Centrosomal protein 72
Tissue enhanced
Detected in some
epididymis:
8.9
lens:
12.3
stomach:
13.2
testis:
28.0
CFAP52
ENSSSCG00000017994
ENSG00000166596
Cilia and flagella associated protein 52
Tissue enhanced
Detected in some
brain:
14.0
fallopian tube:
30.1
testis:
30.3
upper respiratory system:
21.2
CFAP57
ENSSSCG00000023904
ENSG00000243710
Cilia and flagella associated protein 57
Tissue enhanced
Detected in some
fallopian tube:
21.1
lymphoid tissue:
21.4
testis:
15.6
upper respiratory system:
14.8
CFAP61
ENSSSCG00000038858
ENSG00000089101
Cilia and flagella associated protein 61
Tissue enhanced
Detected in some
choroid plexus:
16.5
fallopian tube:
25.0
testis:
41.2
upper respiratory system:
18.9
CHIT1
ENSSSCG00000015477
ENSG00000133063
Chitinase 1
Tissue enhanced
Detected in some
dura mater:
2.8
testis:
7.1
CHRNB3
ENSSSCG00000026363
ENSG00000147432
Cholinergic receptor nicotinic beta 3 subunit
Tissue enhanced
Detected in some
brain:
27.4
retina:
15.2
testis:
6.4
CHST8
ENSSSCG00000035222
ENSG00000124302
Carbohydrate sulfotransferase 8
Tissue enhanced
Detected in some
brain:
11.1
lymphoid tissue:
12.5
pituitary gland:
16.7
testis:
10.1
CPB1
ENSSSCG00000011694
ENSG00000153002
Carboxypeptidase B precursor
Tissue enhanced
Detected in some
adipose tissue:
3.4
testis:
8.5
CXCL11
ENSSSCG00000008978
ENSG00000169248
C-X-C motif chemokine 11 precursor
Tissue enhanced
Detected in some
kidney:
12.1
large intestine:
22.7
testis:
8.4
DAW1
ENSSSCG00000016255
ENSG00000123977
Dynein assembly factor with WD repeats 1
Tissue enhanced
Detected in some
choroid plexus:
39.1
fallopian tube:
37.7
testis:
56.0
DCST1
ENSSSCG00000035071
ENSG00000163357
DC-STAMP domain containing 1
Tissue enhanced
Detected in some
adipose tissue:
12.9
testis:
18.7
DNAH7
ENSSSCG00000032814
ENSG00000118997
Dynein axonemal heavy chain 7
Tissue enhanced
Detected in some
epididymis:
16.1
fallopian tube:
27.7
testis:
17.7
upper respiratory system:
16.9
DNAI2
ENSSSCG00000024357
ENSG00000171595
Dynein axonemal intermediate chain 2
Tissue enhanced
Detected in some
choroid plexus:
13.5
fallopian tube:
27.7
lung:
12.1
testis:
25.2
upper respiratory system:
19.2
DNAJB13
ENSSSCG00000014832
ENSG00000187726
DnaJ homolog subfamily B member 13
Tissue enhanced
Detected in some
choroid plexus:
28.8
fallopian tube:
13.1
testis:
37.3
upper respiratory system:
18.2
DRC7
ENSSSCG00000002817
ENSG00000159625
Dynein regulatory complex subunit 7
Tissue enhanced
Detected in some
fallopian tube:
28.6
lung:
19.0
testis:
21.3
upper respiratory system:
26.9
DYDC1
ENSSSCG00000010338
ENSG00000170788
DPY30 domain containing 1
Tissue enhanced
Detected in some
brain:
10.0
testis:
21.2
EFHB
ENSSSCG00000011205
ENSG00000163576
EF-hand domain family member B
Tissue enhanced
Detected in some
brain:
8.9
choroid plexus:
16.8
fallopian tube:
15.3
testis:
17.7
EPO
ENSSSCG00000007673
ENSG00000130427
Erythropoietin
Tissue enhanced
Detected in some
testis:
5.3
FAM81B
ENSSSCG00000026175
ENSG00000153347
Family with sequence similarity 81 member B
Tissue enhanced
Detected in some
fallopian tube:
14.1
testis:
52.5
FFAR3
ENSSSCG00000002891
ENSG00000126251,ENSG00000185897
Sus scrofa free fatty acid receptor 3 (FFAR3), mRNA.
Tissue enhanced
Detected in some
gallbladder:
5.3
liver:
4.6
stomach:
4.4
testis:
4.1
GALNT14
ENSSSCG00000008524
ENSG00000158089
Polypeptide N-acetylgalactosaminyltransferase 14
Tissue enhanced
Detected in some
brain:
14.8
lens:
7.5
pituitary gland:
7.3
testis:
14.6
thyroid gland:
10.3
GLT1D1
ENSSSCG00000033067
ENSG00000151948
Glycosyltransferase 1 domain containing 1
Tissue enhanced
Detected in some
brain:
11.2
pineal gland:
7.1
retina:
9.1
testis:
19.9
GPR55
ENSSSCG00000035592
ENSG00000135898
G protein-coupled receptor 55
Tissue enhanced
Detected in some
large intestine:
7.5
lymphoid tissue:
9.0
small intestine:
6.9
stomach:
11.5
testis:
5.4
IFN-OMEGA-5
ENSSSCG00000038075
Interferon omega 7 precursor
Tissue enhanced
Detected in some
lymphoid tissue:
2.1
mouth:
1.1
skin:
1.4
testis:
1.6
upper respiratory system:
1.0
IL28B
ENSSSCG00000040814
Interleukin-28B precursor
Tissue enhanced
Detected in some
small intestine:
1.7
testis:
6.2
KCNK13
ENSSSCG00000002432
ENSG00000152315
Potassium channel subfamily K member 13
Tissue enhanced
Detected in some
adipose tissue:
8.6
kidney:
20.2
testis:
10.5
KCNU1
ENSSSCG00000029131
ENSG00000215262
Potassium calcium-activated channel subfamily U member 1
Tissue enhanced
Detected in some
heart:
4.5
male glands:
9.2
testis:
24.9
KLHDC7B
ENSSSCG00000000960
ENSG00000130487
Kelch domain-containing protein 7B
Tissue enhanced
Detected in some
cartilage:
2.1
pituitary gland:
3.7
testis:
4.8
LEFTY2
ENSSSCG00000032299
Left-right determination factor 2 precursor
Tissue enhanced
Detected in some
brain:
7.6
testis:
16.5
LEXM
ENSSSCG00000027362
ENSG00000162398
Lymphocyte expansion molecule
Tissue enhanced
Detected in some
fallopian tube:
7.6
testis:
19.5
Page
of 13 |
next »