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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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454 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
HSPB9
ENSSSCG00000017413
ENSG00000260325
Heat shock protein family B (small) member 9
Tissue enriched
Detected in single
testis:
169.4
TSSK6
ENSSSCG00000013937
ENSG00000178093
Testis-specific serine/threonine-protein kinase 6
Tissue enriched
Detected in single
testis:
84.2
na
ENSSSCG00000005121
ENSG00000120160
Tissue enriched
Detected in single
testis:
77.9
PRSS37
ENSSSCG00000029612
ENSG00000165076
Serine protease 37
Tissue enriched
Detected in single
testis:
138.3
RNF151
ENSSSCG00000034728
ENSG00000179580
Ring finger protein 151
Tissue enriched
Detected in single
testis:
66.9
CRISP2
ENSSSCG00000001736
ENSG00000124490
Cysteine-rich secretory protein 2 precursor
Tissue enriched
Detected in single
testis:
267.5
DAZL
ENSSSCG00000030671
ENSG00000092345
Deleted in azoospermia like
Tissue enriched
Detected in single
testis:
67.6
CABS1
ENSSSCG00000039238
ENSG00000145309
Calcium binding protein, spermatid associated 1
Tissue enriched
Detected in single
testis:
107.2
TRIM69
ENSSSCG00000004681
ENSG00000185880
Tripartite motif containing 69
Tissue enriched
Detected in single
testis:
55.7
ASB17
ENSSSCG00000031522
ENSG00000154007
Ankyrin repeat and SOCS box containing 17
Tissue enriched
Detected in single
testis:
55.4
ACRV1
ENSSSCG00000015216
ENSG00000134940
Acrosomal protein SP-10 precursor
Tissue enriched
Detected in single
testis:
89.4
SAXO1
ENSSSCG00000040408
ENSG00000155875
Stabilizer of axonemal microtubules 1
Tissue enriched
Detected in single
testis:
67.7
SOX30
ENSSSCG00000017051
ENSG00000039600
SRY-box 30
Tissue enriched
Detected in single
testis:
49.5
HMGB4
ENSSSCG00000021247
ENSG00000176256
High mobility group box 4
Tissue enriched
Detected in single
testis:
206.4
C14H10orf120
ENSSSCG00000010717
ENSG00000183559
Uncharacterized protein C10orf120 homolog
Tissue enriched
Detected in single
testis:
48.3
na
ENSSSCG00000038415
Tissue enriched
Detected in single
testis:
48.2
CYLC1
ENSSSCG00000012455
ENSG00000183035
Cylicin 1
Tissue enriched
Detected in single
testis:
47.0
TNP1
ENSSSCG00000016179
ENSG00000118245
Spermatid nuclear transition protein 1
Tissue enriched
Detected in single
testis:
414.6
FSCN3
ENSSSCG00000016592
ENSG00000106328
Fascin-3
Tissue enriched
Detected in single
testis:
69.4
na
ENSSSCG00000010103
Tissue enriched
Detected in single
testis:
128.8
SPATA19
ENSSSCG00000025612
ENSG00000166118
Spermatogenesis-associated protein 19, mitochondrial
Tissue enriched
Detected in single
testis:
96.9
TEX38
ENSSSCG00000021808
ENSG00000186118
Testis expressed 38
Tissue enriched
Detected in single
testis:
102.6
na
ENSSSCG00000005401
ENSG00000155833
Tissue enriched
Detected in single
testis:
65.3
TXNDC8
ENSSSCG00000005454
ENSG00000204193
Thioredoxin domain-containing protein 8
Tissue enriched
Detected in single
testis:
99.0
TEX37
ENSSSCG00000008209
ENSG00000172073
Testis expressed 37
Tissue enriched
Detected in single
testis:
67.9
USP50
ENSSSCG00000004638
ENSG00000170236
Ubiquitin specific peptidase 50
Tissue enriched
Detected in single
testis:
102.2
CETN1
ENSSSCG00000028613
ENSG00000177143
Centrin 1
Tissue enriched
Detected in single
testis:
165.2
ACTL7A
ENSSSCG00000005439
ENSG00000187003
Actin like 7A
Tissue enriched
Detected in single
testis:
73.2
IZUMO3
ENSSSCG00000005129
ENSG00000205442
IZUMO family member 3
Tissue enriched
Detected in single
testis:
37.5
na
ENSSSCG00000033119
Tissue enriched
Detected in single
testis:
50.2
na
ENSSSCG00000003993
ENSG00000174255
Tissue enriched
Detected in single
testis:
61.6
na
ENSSSCG00000010393
ENSG00000178645
Tissue enriched
Detected in single
testis:
60.8
TNP2
ENSSSCG00000027300
ENSG00000178279
Transition protein 2
Tissue enriched
Detected in single
testis:
302.7
na
ENSSSCG00000004992
ENSG00000189139
Tissue enriched
Detected in single
testis:
59.2
na
ENSSSCG00000004243
Tissue enriched
Detected in single
testis:
48.8
na
ENSSSCG00000033839
Tissue enriched
Detected in single
testis:
33.7
FAM71A
ENSSSCG00000015596
ENSG00000162771
Family with sequence similarity 71 member A
Tissue enriched
Detected in single
testis:
88.0
na
ENSSSCG00000025289
Tissue enriched
Detected in single
testis:
48.2
UBQLN3
ENSSSCG00000014691
ENSG00000175520
Ubiquilin 3
Tissue enriched
Detected in single
testis:
106.1
ACTL9
ENSSSCG00000013605
ENSG00000181786
Actin like 9
Tissue enriched
Detected in single
testis:
101.8
ODF1
ENSSSCG00000006056
ENSG00000155087
Outer dense fiber protein 1
Tissue enriched
Detected in single
testis:
209.1
SPEM3
ENSSSCG00000040543
ENSG00000283439
SPEM family member 3
Tissue enriched
Detected in single
testis:
90.6
THEG
ENSSSCG00000014002
ENSG00000105549
Theg spermatid protein
Tissue enriched
Detected in single
testis:
78.3
CAPZA3
ENSSSCG00000000589
ENSG00000177938
Capping actin protein of muscle Z-line alpha subunit 3
Tissue enriched
Detected in single
testis:
82.1
H1FNT
ENSSSCG00000000820
ENSG00000187166
H1 histone family member N, testis specific
Tissue enriched
Detected in single
testis:
83.2
na
ENSSSCG00000022114
ENSG00000166928
Tissue enriched
Detected in single
testis:
109.7
ACTL7B
ENSSSCG00000005438
ENSG00000148156
Actin like 7B
Tissue enriched
Detected in single
testis:
79.5
na
ENSSSCG00000034271
Tissue enriched
Detected in single
testis:
26.0
na
ENSSSCG00000014690
ENSG00000175518
Tissue enriched
Detected in single
testis:
127.9
FNDC8
ENSSSCG00000021617
ENSG00000073598
Fibronectin type III domain containing 8
Tissue enriched
Detected in single
testis:
90.8
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