We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
293 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
Page
of 6 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ADD2
ENSSSCG00000020736
ENSG00000075340
Adducin 2
Tissue enhanced
Detected in some
brain:
29.2
cervix:
35.0
endometrium:
17.3
ovary:
15.1
retina:
17.8
ADGRB3
ENSSSCG00000004270
ENSG00000135298
Adhesion G protein-coupled receptor B3
Tissue enhanced
Detected in some
brain:
22.8
pineal gland:
14.5
retina:
8.2
ASIC4
ENSSSCG00000029968
ENSG00000072182
Acid sensing ion channel subunit family member 4
Tissue enhanced
Detected in some
brain:
11.9
pituitary gland:
14.0
retina:
24.4
BRSK2
ENSSSCG00000037337
ENSG00000174672
BR serine/threonine kinase 2
Tissue enhanced
Detected in some
brain:
26.5
retina:
17.2
CA10
ENSSSCG00000023169
ENSG00000154975
Carbonic anhydrase 10
Tissue enhanced
Detected in some
brain:
38.6
pineal gland:
34.4
retina:
18.7
CACNG2
ENSSSCG00000033551
ENSG00000166862
Calcium voltage-gated channel auxiliary subunit gamma 2
Tissue enhanced
Detected in some
brain:
15.4
retina:
5.4
CACNG5
ENSSSCG00000036461
ENSG00000075429
Calcium voltage-gated channel auxiliary subunit gamma 5
Tissue enhanced
Detected in some
adipose tissue:
8.6
brain:
37.1
retina:
14.7
CACNG7
ENSSSCG00000025532
ENSG00000105605
Calcium voltage-gated channel auxiliary subunit gamma 7
Tissue enhanced
Detected in some
brain:
49.8
pineal gland:
14.7
retina:
15.6
CADM2
ENSSSCG00000011999
ENSG00000175161
Cell adhesion molecule 2
Tissue enhanced
Detected in some
brain:
51.0
pineal gland:
22.4
retina:
25.0
CADPS
ENSSSCG00000011489
ENSG00000163618
Calcium dependent secretion activator
Tissue enhanced
Detected in some
brain:
34.3
cornea:
14.2
pituitary gland:
14.2
retina:
54.8
CCDC184
ENSSSCG00000039340
ENSG00000177875
Coiled-coil domain containing 184
Tissue enhanced
Detected in some
brain:
18.8
pituitary gland:
13.3
retina:
5.3
testis:
6.0
CDH10
ENSSSCG00000016802
ENSG00000040731
Cadherin 10
Tissue enhanced
Detected in some
brain:
21.6
pituitary gland:
5.0
retina:
6.3
CDH12
ENSSSCG00000016799
ENSG00000154162
Cadherin 12
Tissue enhanced
Detected in some
brain:
18.4
retina:
9.4
smooth muscle:
9.5
CELSR3
ENSSSCG00000011360
ENSG00000008300
Cadherin EGF LAG seven-pass G-type receptor 3
Tissue enhanced
Detected in some
brain:
16.7
pituitary gland:
9.2
retina:
9.7
testis:
16.2
CEND1
ENSSSCG00000012845
ENSG00000184524
Cell cycle exit and neuronal differentiation protein 1
Tissue enhanced
Detected in some
brain:
53.1
pineal gland:
20.0
retina:
11.6
CERKL
ENSSSCG00000016010
ENSG00000188452
Ceramide kinase like
Tissue enhanced
Detected in some
fallopian tube:
15.5
pineal gland:
42.1
retina:
36.9
CHRNB3
ENSSSCG00000026363
ENSG00000147432
Cholinergic receptor nicotinic beta 3 subunit
Tissue enhanced
Detected in some
brain:
27.4
retina:
15.2
testis:
6.4
CPLX1
ENSSSCG00000037527
ENSG00000168993
Complexin 1
Tissue enhanced
Detected in some
brain:
72.4
kidney:
15.6
retina:
24.1
CRMP1
ENSSSCG00000022896
ENSG00000072832
Collapsin response mediator protein 1
Tissue enhanced
Detected in some
brain:
46.6
pineal gland:
17.7
retina:
18.9
CYP26A1
ENSSSCG00000010475
ENSG00000095596
Cytochrome P450, family 26, subfamily A, polypeptide 1
Tissue enhanced
Detected in some
brain:
10.6
cornea:
10.6
endometrium:
15.5
retina:
6.7
DIRAS2
ENSSSCG00000031694
ENSG00000165023
GTP-binding protein Di-Ras2
Tissue enhanced
Detected in some
brain:
64.8
gallbladder:
15.6
pineal gland:
33.2
retina:
16.9
DISP3
ENSSSCG00000003417
ENSG00000204624
Dispatched RND transporter family member 3
Tissue enhanced
Detected in some
brain:
13.0
epididymis:
5.6
pineal gland:
13.9
retina:
5.4
DSCAML1
ENSSSCG00000015082
ENSG00000177103
DS cell adhesion molecule like 1
Tissue enhanced
Detected in some
brain:
15.0
fallopian tube:
6.9
retina:
10.8
DUSP26
ENSSSCG00000015835
ENSG00000133878
Dual specificity phosphatase 26
Tissue enhanced
Detected in some
brain:
26.3
heart:
19.2
retina:
17.4
skeletal muscle:
49.5
ELFN2
ENSSSCG00000000131
ENSG00000166897
Extracellular leucine rich repeat and fibronectin type III domain containing 2
Tissue enhanced
Detected in some
brain:
32.5
retina:
8.5
ELMOD1
ENSSSCG00000015002
ENSG00000110675
ELMO domain containing 1
Tissue enhanced
Detected in some
brain:
68.9
pineal gland:
15.6
pituitary gland:
17.7
retina:
20.8
FAM19A4
ENSSSCG00000033199
ENSG00000163377
Family with sequence similarity 19 member A4, C-C motif chemokine like
Tissue enhanced
Detected in some
brain:
18.7
retina:
7.4
FAM71C
ENSSSCG00000037573
ENSG00000180219
Family with sequence similarity 71 member C
Tissue enhanced
Detected in some
brain:
19.2
choroid plexus:
4.6
pineal gland:
5.4
retina:
5.8
FGF8
ENSSSCG00000036146
ENSG00000107831
Fibroblast growth factor 8
Tissue enhanced
Detected in some
adipose tissue:
3.5
brain:
2.1
cartilage:
1.8
retina:
2.1
FNDC5
ENSSSCG00000025834
ENSG00000160097
Fibronectin type III domain containing 5
Tissue enhanced
Detected in some
brain:
43.5
choroid plexus:
28.5
retina:
14.5
FRMPD2
ENSSSCG00000010379
ENSG00000170324
FERM and PDZ domain containing 2
Tissue enhanced
Detected in some
fallopian tube:
22.7
pineal gland:
40.3
retina:
29.6
FUT9
ENSSSCG00000004338
ENSG00000172461
Fucosyltransferase 9
Tissue enhanced
Detected in some
brain:
32.7
pineal gland:
12.2
retina:
7.2
G6PC2
ENSSSCG00000015925
ENSG00000152254
Glucose-6-phosphatase catalytic subunit 2
Tissue enhanced
Detected in some
brain:
3.1
cartilage:
1.0
retina:
1.6
GABRA1
ENSSSCG00000023661
ENSG00000022355
Gamma-aminobutyric acid type A receptor alpha1 subunit
Tissue enhanced
Detected in some
brain:
51.1
pineal gland:
20.7
retina:
12.0
GABRG2
ENSSSCG00000017025
ENSG00000113327
Gamma-aminobutyric acid type A receptor gamma2 subunit
Tissue enhanced
Detected in some
brain:
38.1
pineal gland:
15.9
pituitary gland:
9.1
retina:
10.5
GJD2
ENSSSCG00000036219
ENSG00000159248
Gap junction protein delta 2
Tissue enhanced
Detected in some
brain:
6.5
pineal gland:
16.9
retina:
27.6
GLT1D1
ENSSSCG00000033067
ENSG00000151948
Glycosyltransferase 1 domain containing 1
Tissue enhanced
Detected in some
brain:
11.2
pineal gland:
7.1
retina:
9.1
testis:
19.9
GPR158
ENSSSCG00000038536
ENSG00000151025
G protein-coupled receptor 158
Tissue enhanced
Detected in some
brain:
32.6
pineal gland:
9.2
pituitary gland:
7.6
retina:
6.6
GPR26
ENSSSCG00000010727
ENSG00000154478
G protein-coupled receptor 26
Tissue enhanced
Detected in some
brain:
35.3
lens:
11.8
retina:
7.1
GRIK1
ENSSSCG00000025119
ENSG00000171189
Glutamate ionotropic receptor kainate type subunit 1
Tissue enhanced
Detected in some
choroid plexus:
62.6
pineal gland:
14.6
retina:
21.9
HES3
ENSSSCG00000003370
ENSG00000173673
Hes family bHLH transcription factor 3
Tissue enhanced
Detected in some
brain:
7.0
retina:
5.2
HES5
ENSSSCG00000037304
ENSG00000197921
Hes family bHLH transcription factor 5
Tissue enhanced
Detected in some
brain:
11.4
lens:
3.1
retina:
3.8
HHLA1
ENSSSCG00000022257
ENSG00000132297
HERV-H LTR-associating 1
Tissue enhanced
Detected in some
brain:
1.9
retina:
1.3
skin:
2.2
IL9
ENSSSCG00000025818
ENSG00000145839
Interleukin-9 precursor
Tissue enhanced
Detected in some
brain:
2.6
kidney:
3.2
pineal gland:
9.0
retina:
3.1
KBTBD13
ENSSSCG00000035667
ENSG00000234438
Kelch repeat and BTB domain containing 13
Tissue enhanced
Detected in some
heart:
8.2
retina:
10.7
skeletal muscle:
6.6
KCNA2
ENSSSCG00000037709
ENSG00000177301
Potassium voltage-gated channel subfamily A member 2
Tissue enhanced
Detected in some
brain:
39.7
choroid plexus:
13.6
retina:
7.8
KCNB2
ENSSSCG00000006185
ENSG00000182674
Potassium voltage-gated channel subfamily B member 2
Tissue enhanced
Detected in some
brain:
16.8
pineal gland:
23.1
retina:
32.8
KCNIP4
ENSSSCG00000023934
ENSG00000185774
Potassium voltage-gated channel interacting protein 4
Tissue enhanced
Detected in some
brain:
24.7
retina:
11.3
small intestine:
12.2
smooth muscle:
10.4
KHDRBS2
ENSSSCG00000001490
ENSG00000112232
KH RNA binding domain containing, signal transduction associated 2
Tissue enhanced
Detected in some
brain:
15.2
retina:
5.5
KIRREL2
ENSSSCG00000002915
ENSG00000126259
Kirre like nephrin family adhesion molecule 2
Tissue enhanced
Detected in some
heart:
5.2
pineal gland:
11.5
retina:
15.5
Page
of 6 |
next »