We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
366 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
Page
of 8 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ABHD12
ENSSSCG00000040449
ENSG00000100997
Abhydrolase domain containing 12
Tissue enhanced
Detected in all
epididymis:
34.9
lens:
116.2
ACP4
ENSSSCG00000024736
ENSG00000142513
Acid phosphatase 4
Tissue enhanced
Detected in all
lens:
40.4
testis:
36.4
ACVR2A
ENSSSCG00000015669
ENSG00000121989
Activin receptor type-2A precursor
Tissue enhanced
Detected in all
lens:
65.2
AGFG1
ENSSSCG00000016248
ENSG00000173744
ArfGAP with FG repeats 1
Tissue enhanced
Detected in all
lens:
77.8
AKR1B1
ENSSSCG00000040608
ENSG00000085662
Aldose reductase
Tissue enhanced
Detected in all
kidney:
55.9
lens:
113.2
male glands:
56.6
ALS2
ENSSSCG00000016109
ENSG00000003393
ALS2, alsin Rho guanine nucleotide exchange factor
Tissue enhanced
Detected in all
brain:
52.3
lens:
46.4
AMZ2
ENSSSCG00000017264
ENSG00000196704
Archaemetzincin-2
Tissue enhanced
Detected in all
lens:
63.4
ANAPC13
ENSSSCG00000033057
ENSG00000129055
Anaphase-promoting complex subunit 13
Tissue enhanced
Detected in all
lens:
87.0
ANKRD37
ENSSSCG00000015798
ENSG00000186352
Ankyrin repeat domain 37
Tissue enhanced
Detected in all
lens:
23.4
AP3S2
ENSSSCG00000030174
ENSG00000157823
AP-3 complex subunit sigma-2
Tissue enhanced
Detected in all
lens:
67.4
ARHGAP1
ENSSSCG00000013256
ENSG00000175220
Rho GTPase activating protein 1
Tissue enhanced
Detected in all
lens:
114.8
ARHGAP24
ENSSSCG00000009229
ENSG00000138639
Rho GTPase activating protein 24
Tissue enhanced
Detected in all
kidney:
44.3
lens:
48.2
pineal gland:
47.9
ARL3
ENSSSCG00000031782
ENSG00000138175
ADP-ribosylation factor-like protein 3
Tissue enhanced
Detected in all
lens:
44.5
pineal gland:
36.6
ARMT1
ENSSSCG00000004088
ENSG00000146476
Protein-glutamate O-methyltransferase
Tissue enhanced
Detected in all
lens:
29.5
ARRDC4
ENSSSCG00000002252
ENSG00000140450
Arrestin domain containing 4
Tissue enhanced
Detected in all
lens:
48.0
ovary:
47.3
ASCC2
ENSSSCG00000025186
ENSG00000100325
Activating signal cointegrator 1 complex subunit 2
Tissue enhanced
Detected in all
lens:
55.2
ASNA1
ENSSSCG00000038776
ENSG00000198356
ArsA arsenite transporter, ATP-binding, homolog 1 (bacterial)
Tissue enhanced
Detected in all
lens:
37.9
ATF5
ENSSSCG00000003201
ENSG00000169136
Activating transcription factor 5
Tissue enhanced
Detected in all
lens:
54.3
liver:
130.9
salivary gland:
58.8
ATP6V1E1
ENSSSCG00000000767
ENSG00000131100
ATPase H+ transporting V1 subunit E1
Tissue enhanced
Detected in all
lens:
85.9
ATXN10
ENSSSCG00000024864
ENSG00000130638
Ataxin 10
Tissue enhanced
Detected in all
lens:
59.5
B3GNT7
ENSSSCG00000033015
ENSG00000156966
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
Tissue enhanced
Detected in all
cornea:
31.8
large intestine:
40.0
lens:
33.5
B3GNTL1
ENSSSCG00000027229
ENSG00000175711
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1
Tissue enhanced
Detected in all
lens:
68.0
BCCIP
ENSSSCG00000010743
ENSG00000107949
BRCA2 and CDKN1A interacting protein
Tissue enhanced
Detected in all
lens:
95.3
BCL2L13
ENSSSCG00000040373
ENSG00000099968
BCL2 like 13
Tissue enhanced
Detected in all
lens:
75.6
BNIP3
ENSSSCG00000024388
ENSG00000176171
BCL2 interacting protein 3
Tissue enhanced
Detected in all
cartilage:
175.1
lens:
149.3
BRWD1
ENSSSCG00000021042
ENSG00000185658
Proteasome assembly chaperone 1
Tissue enhanced
Detected in all
lens:
98.6
BTBD6
ENSSSCG00000035555
ENSG00000184887
BTB domain containing 6
Tissue enhanced
Detected in all
lens:
63.4
skeletal muscle:
66.5
BUD23
ENSSSCG00000007713
ENSG00000071462
BUD23, rRNA methyltransferase and ribosome maturation factor
Tissue enhanced
Detected in all
lens:
71.2
C12orf29
ENSSSCG00000000925
ENSG00000133641
Uncharacterized protein C12orf29 homolog
Tissue enhanced
Detected in all
lens:
32.6
C1orf122
ENSSSCG00000038888
ENSG00000197982
Chromosome 1 open reading frame 122
Tissue enhanced
Detected in all
lens:
64.4
C1QTNF6
ENSSSCG00000030325
ENSG00000133466
Complement C1q tumor necrosis factor-related protein 6 precursor
Tissue enhanced
Detected in all
dura mater:
39.8
lens:
77.4
C8orf88
ENSSSCG00000040562
ENSG00000253250
Chromosome 8 open reading frame 88
Tissue enhanced
Detected in all
lens:
83.5
CAB39
ENSSSCG00000016266
ENSG00000135932
Calcium binding protein 39
Tissue enhanced
Detected in all
lens:
81.7
CADM1
ENSSSCG00000031831
ENSG00000182985
Cell adhesion molecule 1
Tissue enhanced
Detected in all
lens:
122.4
CAPG
ENSSSCG00000008239
ENSG00000042493
Capping actin protein, gelsolin like
Tissue enhanced
Detected in all
cornea:
75.4
lens:
57.7
CCDC6
ENSSSCG00000010211
ENSG00000108091
Coiled-coil domain containing 6
Tissue enhanced
Detected in all
cervix:
87.3
lens:
97.5
CCDC85B
ENSSSCG00000012968
ENSG00000175602
Coiled-coil domain containing 85B
Tissue enhanced
Detected in all
brain:
40.7
lens:
68.3
CCDC85C
ENSSSCG00000037284
ENSG00000205476
Coiled-coil domain containing 85C
Tissue enhanced
Detected in all
lens:
33.8
CCM2
ENSSSCG00000016734
ENSG00000136280
CCM2 scaffolding protein
Tissue enhanced
Detected in all
lens:
84.1
CCT2
ENSSSCG00000000496
ENSG00000166226
T-complex protein 1 subunit beta
Tissue enhanced
Detected in all
lens:
68.1
CCT3
ENSSSCG00000006487
ENSG00000163468
T-complex protein 1 subunit gamma
Tissue enhanced
Detected in all
lens:
89.6
CCT7
ENSSSCG00000008303
ENSG00000135624
T-complex protein 1 subunit eta
Tissue enhanced
Detected in all
lens:
50.3
CD40
ENSSSCG00000035078
ENSG00000101017
Tumor necrosis factor receptor superfamily member 5
Tissue enhanced
Detected in all
lens:
32.7
lymphoid tissue:
21.3
CD99L2
ENSSSCG00000012744
ENSG00000102181
CD99 molecule like 2
Tissue enhanced
Detected in all
lens:
50.5
CDC34
ENSSSCG00000039640
ENSG00000099804
Cell division cycle 34
Tissue enhanced
Detected in all
lens:
142.6
skeletal muscle:
116.2
CDV3
ENSSSCG00000027294
ENSG00000091527
CDV3 homolog
Tissue enhanced
Detected in all
lens:
125.4
CENPM
ENSSSCG00000035991
ENSG00000100162
Centromere protein M
Tissue enhanced
Detected in all
lens:
53.2
CHCHD5
ENSSSCG00000008094
ENSG00000125611
Coiled-coil-helix-coiled-coil-helix domain containing 5
Tissue enhanced
Detected in all
lens:
70.4
testis:
52.8
CHM
ENSSSCG00000012463
ENSG00000188419
CHM, Rab escort protein 1
Tissue enhanced
Detected in all
lens:
51.9
CINP
ENSSSCG00000002530
ENSG00000100865
Cyclin dependent kinase 2 interacting protein
Tissue enhanced
Detected in all
lens:
67.8
Page
of 8 |
next »