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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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82 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000039768
Tissue enriched
Detected in some
kidney:
12.1
NPHS2
ENSSSCG00000015526
ENSG00000116218
NPHS2, podocin
Tissue enriched
Detected in some
kidney:
69.5
OXGR1
ENSSSCG00000024459
ENSG00000165621
Oxoglutarate receptor 1
Tissue enriched
Detected in some
kidney:
19.0
PAPLN
ENSSSCG00000002341
ENSG00000100767
Papilin, proteoglycan like sulfated glycoprotein
Tissue enriched
Detected in many
kidney:
72.8
PKHD1
ENSSSCG00000001746
ENSG00000170927
PKHD1, fibrocystin/polyductin
Tissue enriched
Detected in some
kidney:
44.9
PTGER1
ENSSSCG00000013782
ENSG00000160951
Prostaglandin E receptor 1
Tissue enriched
Detected in many
kidney:
18.3
RANBP3L
ENSSSCG00000016838
ENSG00000164188
RAN binding protein 3 like
Tissue enriched
Detected in many
kidney:
94.2
SLC12A1
ENSSSCG00000004659
ENSG00000074803
Solute carrier family 12 member 1
Tissue enriched
Detected in some
kidney:
142.8
SLC12A3
ENSSSCG00000032643
ENSG00000070915
Solute carrier family 12 member 3
Tissue enriched
Detected in single
kidney:
111.7
SLC13A3
ENSSSCG00000035906
ENSG00000158296
Solute carrier family 13 member 3
Tissue enriched
Detected in some
kidney:
93.6
SLC14A2
ENSSSCG00000004491
ENSG00000132874
Solute carrier family 14 member 2
Tissue enriched
Detected in some
kidney:
79.9
SLC22A11
ENSSSCG00000020831
ENSG00000168065
Solute carrier family 22 member 11
Tissue enriched
Detected in single
kidney:
23.5
SLC22A12
ENSSSCG00000013025
ENSG00000197891
Solute carrier family 22 member 12
Tissue enriched
Detected in single
kidney:
87.1
SLC22A2
ENSSSCG00000004040
ENSG00000112499
Solute carrier family 22 member 2
Tissue enriched
Detected in some
kidney:
68.3
SLC22A8
ENSSSCG00000029516
ENSG00000149452
Solute carrier family 22 member 8
Tissue enriched
Detected in many
kidney:
125.6
SLC23A3
ENSSSCG00000029694
ENSG00000213901
Solute carrier family 23 member 3
Tissue enriched
Detected in single
kidney:
53.8
SLC34A1
ENSSSCG00000037535
ENSG00000131183
Sodium-dependent phosphate transport protein 2A
Tissue enriched
Detected in single
kidney:
193.9
SLC34A3
ENSSSCG00000040105
ENSG00000198569
Solute carrier family 34 member 3
Tissue enriched
Detected in many
kidney:
76.1
SLC47A2
ENSSSCG00000018042
ENSG00000180638
Solute carrier family 47 member 2
Tissue enriched
Detected in some
kidney:
69.2
SLC4A9
ENSSSCG00000014363
ENSG00000113073
Solute carrier family 4 member 9
Tissue enriched
Detected in some
kidney:
60.0
SLC5A2
ENSSSCG00000024058
ENSG00000140675
Solute carrier family 5 member 2
Tissue enriched
Detected in all
kidney:
43.1
SLC6A18
ENSSSCG00000017117
ENSG00000164363
Solute carrier family 6 member 18
Tissue enriched
Detected in single
kidney:
134.7
SLC7A13
ENSSSCG00000022935
ENSG00000164893
Solute carrier family 7 member 13
Tissue enriched
Detected in single
kidney:
22.2
SNX31
ENSSSCG00000006064
ENSG00000174226
Sorting nexin 31
Tissue enriched
Detected in some
urinary bladder:
52.1
TINAG
ENSSSCG00000001484
ENSG00000137251
Tubulointerstitial nephritis antigen
Tissue enriched
Detected in many
kidney:
119.3
TMEM174
ENSSSCG00000014067
ENSG00000164325
Transmembrane protein 174
Tissue enriched
Detected in some
kidney:
69.3
TMEM207
ENSSSCG00000022341
ENSG00000198398
Transmembrane protein 207
Tissue enriched
Detected in single
kidney:
21.6
TPCN2
ENSSSCG00000012875
ENSG00000162341
Two pore segment channel 2
Tissue enriched
Detected in all
kidney:
79.8
TRPM5
ENSSSCG00000039644
ENSG00000070985
Transient receptor potential cation channel subfamily M member 5
Tissue enriched
Detected in some
kidney:
89.7
UMOD
ENSSSCG00000007859
ENSG00000169344
Uromodulin
Tissue enriched
Detected in single
kidney:
213.0
UPK1A
ENSSSCG00000002901
ENSG00000105668
Uroplakin-1a
Tissue enriched
Detected in some
urinary bladder:
84.2
ZNF280A
ENSSSCG00000034651
ENSG00000169548
Zinc finger protein 280A
Tissue enriched
Detected in some
kidney:
19.7
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