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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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246 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
NOTUM
ENSSSCG00000039013
ENSG00000185269
Notum, palmitoleoyl-protein carboxylesterase
Tissue enriched
Detected in many
liver:
58.8
NR1I3
ENSSSCG00000006353
ENSG00000143257
Nuclear receptor subfamily 1 group I member 3
Tissue enriched
Detected in many
liver:
60.5
OIT3
ENSSSCG00000010293
ENSG00000138315
Oncoprotein-induced transcript 3 protein precursor
Tissue enriched
Detected in some
liver:
35.5
OR10P1
ENSSSCG00000037147
ENSG00000175398
Olfactory receptor family 10 subfamily P member 1
Tissue enriched
Detected in single
liver:
16.7
OR52N4
ENSSSCG00000038239
ENSG00000181074
Olfactory receptor family 52 subfamily N member 4 (gene/pseudogene)
Tissue enriched
Detected in single
liver:
3.7
OTC
ENSSSCG00000012236
Ornithine carbamoyltransferase, mitochondrial
Tissue enriched
Detected in all
liver:
86.4
PAH
ENSSSCG00000000856
ENSG00000171759
Phenylalanine hydroxylase
Tissue enriched
Detected in some
liver:
213.5
PCSK9
ENSSSCG00000025020
ENSG00000169174
Proprotein convertase subtilisin/kexin type 9
Tissue enriched
Detected in some
liver:
95.3
PKLR
ENSSSCG00000026149
ENSG00000143627
Pyruvate kinase L/R
Tissue enriched
Detected in some
liver:
53.5
PLA2G12B
ENSSSCG00000010291
ENSG00000138308
Group XIIB secretory phospholipase A2-like protein precursor
Tissue enriched
Detected in some
liver:
29.3
PLG
ENSSSCG00000004038
ENSG00000122194
Plasminogen precursor
Tissue enriched
Detected in some
liver:
236.1
PROC
ENSSSCG00000023693
ENSG00000115718
Vitamin K-dependent protein C precursor
Tissue enriched
Detected in some
liver:
156.9
RCL1
ENSSSCG00000005217
ENSG00000120158
RNA terminal phosphate cyclase like 1
Tissue enriched
Detected in all
liver:
83.3
RDH16
ENSSSCG00000000419
ENSG00000139547
Retinol dehydrogenase 16 (all-trans) precursor
Tissue enriched
Detected in many
liver:
227.3
RGN
ENSSSCG00000022390
ENSG00000130988
Regucalcin
Tissue enriched
Detected in all
liver:
131.4
SDR9C7
ENSSSCG00000000415
ENSG00000170426
Short chain dehydrogenase/reductase family 9C member 7
Tissue enriched
Detected in some
liver:
39.0
SERPINA11
ENSSSCG00000002479
ENSG00000186910
Serpin family A member 11
Tissue enriched
Detected in some
liver:
78.2
SERPINA3-2
ENSSSCG00000002487
Alpha-1-antichymotrypsin 2 precursor
Tissue enriched
Detected in some
liver:
185.9
SERPINA4
ENSSSCG00000039378
ENSG00000100665
Serpin family A member 4
Tissue enriched
Detected in some
liver:
44.2
SERPINA5
ENSSSCG00000002481
ENSG00000188488
Serpin family A member 5
Tissue enriched
Detected in some
liver:
208.4
SERPINA6
ENSSSCG00000002475
ENSG00000170099
Corticosteroid-binding globulin precursor
Tissue enriched
Detected in some
liver:
79.4
SERPINA7
ENSSSCG00000012547
ENSG00000123561
Thyroxine-binding globulin precursor
Tissue enriched
Detected in single
liver:
30.7
SERPINC1
ENSSSCG00000015493
ENSG00000117601
Antithrombin-III precursor
Tissue enriched
Detected in some
liver:
265.5
SERPIND1
ENSSSCG00000010093
ENSG00000099937
Serpin family D member 1
Tissue enriched
Detected in some
liver:
171.8
SLC10A1
ENSSSCG00000002313
ENSG00000100652
Solute carrier family 10 member 1
Tissue enriched
Detected in many
liver:
97.1
SLC10A5
ENSSSCG00000033693
ENSG00000253598
Solute carrier family 10 member 5
Tissue enriched
Detected in many
liver:
26.7
SLC22A7
ENSSSCG00000027796
ENSG00000137204
Solute carrier family 22 member 7
Tissue enriched
Detected in some
liver:
75.4
SLC25A47
ENSSSCG00000002515
ENSG00000140107
Solute carrier family 25 member 47
Tissue enriched
Detected in some
liver:
83.0
SLC27A5
ENSSSCG00000031449
ENSG00000083807
Solute carrier family 27 member 5
Tissue enriched
Detected in many
liver:
100.7
SLC2A2
ENSSSCG00000020927
ENSG00000163581
Solute carrier family 2, facilitated glucose transporter member 2
Tissue enriched
Detected in many
liver:
70.9
SLC38A4
ENSSSCG00000026597
ENSG00000139209
Solute carrier family 38 member 4
Tissue enriched
Detected in some
liver:
117.9
SLC7A2
ENSSSCG00000006987
ENSG00000003989
Cationic amino acid transporter 2
Tissue enriched
Detected in many
liver:
87.6
SMLR1
ENSSSCG00000033538
ENSG00000256162
Small leucine rich protein 1
Tissue enriched
Detected in many
liver:
25.0
SPP2
ENSSSCG00000016315
ENSG00000072080
Secreted phosphoprotein 24 precursor
Tissue enriched
Detected in some
liver:
139.3
SUCNR1
ENSSSCG00000022105
ENSG00000198829
Succinate receptor 1
Tissue enriched
Detected in many
liver:
28.7
TAS2R39
ENSSSCG00000021954
ENSG00000236398
Taste 2 receptor member 39
Tissue enriched
Detected in many
liver:
28.5
TAT
ENSSSCG00000002736
ENSG00000198650
Tyrosine aminotransferase
Tissue enriched
Detected in some
liver:
149.8
TDO2
ENSSSCG00000008868
ENSG00000151790
Tryptophan 2,3-dioxygenase
Tissue enriched
Detected in some
liver:
194.1
TDRD15
ENSSSCG00000035036
ENSG00000218819
Tudor domain containing 15
Tissue enriched
Detected in some
liver:
12.5
TFR2
ENSSSCG00000007671
ENSG00000106327
Transferrin receptor 2
Tissue enriched
Detected in some
liver:
84.5
TMPRSS6
ENSSSCG00000026067
ENSG00000187045
Transmembrane serine protease 6
Tissue enriched
Detected in some
liver:
64.8
UGT2B31
ENSSSCG00000039276
UDP-glucuronosyltransferase 2B31 precursor
Tissue enriched
Detected in some
liver:
99.1
UOX
ENSSSCG00000022206
Uricase precursor
Tissue enriched
Detected in some
liver:
74.9
URAD
ENSSSCG00000009316
ENSG00000183463
Ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase
Tissue enriched
Detected in some
liver:
25.9
UROC1
ENSSSCG00000001823
ENSG00000159650
Urocanate hydratase
Tissue enriched
Detected in all
liver:
93.2
VTN
ENSSSCG00000027801
ENSG00000109072
Vitronectin precursor
Tissue enriched
Detected in some
liver:
468.6
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