We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
444 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
Page
of 9 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ABCA12
ENSSSCG00000034282
ENSG00000144452
ATP binding cassette subfamily A member 12
Tissue enhanced
Detected in some
epididymis:
8.7
large intestine:
17.5
skin:
26.0
testis:
6.2
ABCA5
ENSSSCG00000017255
ENSG00000154265
ATP binding cassette subfamily A member 5
Tissue enhanced
Detected in all
epididymis:
39.2
ABCC3
ENSSSCG00000017561
ENSG00000108846
ATP binding cassette subfamily C member 3
Tissue enhanced
Detected in many
epididymis:
30.2
male glands:
39.6
ABHD12
ENSSSCG00000040449
ENSG00000100997
Abhydrolase domain containing 12
Tissue enhanced
Detected in all
epididymis:
34.9
lens:
116.2
ACCSL
ENSSSCG00000013283
ENSG00000205126
1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like
Tissue enhanced
Detected in all
epididymis:
26.1
ADAM28
ENSSSCG00000009644
ENSG00000042980
ADAM metallopeptidase domain 28
Tissue enhanced
Detected in all
epididymis:
81.1
urinary bladder:
46.5
ADCK5
ENSSSCG00000005907
ENSG00000173137
AarF domain containing kinase 5
Tissue enhanced
Detected in all
epididymis:
47.5
AFF2
ENSSSCG00000012730
ENSG00000155966
AF4/FMR2 family member 2
Tissue enhanced
Detected in many
epididymis:
37.8
male glands:
53.3
AMOT
ENSSSCG00000012591
ENSG00000126016
Angiomotin
Tissue enhanced
Detected in all
epididymis:
59.2
male glands:
93.4
skeletal muscle:
52.8
APCDD1
ENSSSCG00000039797
ENSG00000154856
APC down-regulated 1
Tissue enhanced
Detected in all
epididymis:
55.5
APEH
ENSSSCG00000011385
ENSG00000164062
Acylamino-acid-releasing enzyme
Tissue enhanced
Detected in all
epididymis:
63.2
ARHGEF38
ENSSSCG00000021764
ENSG00000236699
Rho guanine nucleotide exchange factor 38
Tissue enhanced
Detected in many
epididymis:
22.1
male glands:
29.4
ARNT2
ENSSSCG00000040288
ENSG00000172379
Aryl hydrocarbon receptor nuclear translocator 2
Tissue enhanced
Detected in many
brain:
40.4
cornea:
43.5
epididymis:
27.7
ATP6V1C2
ENSSSCG00000008634
ENSG00000143882
ATPase H+ transporting V1 subunit C2
Tissue enhanced
Detected in many
brain:
22.5
epididymis:
24.1
male glands:
48.7
AWAT1
ENSSSCG00000031012
ENSG00000204195
Acyl-CoA wax alcohol acyltransferase 1
Tissue enhanced
Detected in single
epididymis:
1.0
AWAT2
ENSSSCG00000012384
ENSG00000147160
Acyl-CoA wax alcohol acyltransferase 2
Tissue enhanced
Detected in some
epididymis:
21.1
thyroid gland:
8.6
B3GALT4
ENSSSCG00000001503
ENSG00000235863
Beta-1,3-galactosyltransferase 4
Tissue enhanced
Detected in all
epididymis:
42.4
B3GNT5
ENSSSCG00000024393
ENSG00000176597
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
Tissue enhanced
Detected in many
epididymis:
52.4
lens:
60.4
BAIAP2L2
ENSSSCG00000000111
ENSG00000128298
BAI1 associated protein 2 like 2
Tissue enhanced
Detected in many
epididymis:
25.4
kidney:
40.6
large intestine:
45.5
small intestine:
45.7
BCLAF3
ENSSSCG00000023334
ENSG00000173681
BCLAF1 and THRAP3 family member 3
Tissue enhanced
Detected in all
epididymis:
53.3
BEND4
ENSSSCG00000008802
ENSG00000188848
BEN domain containing 4
Tissue enhanced
Detected in some
cartilage:
50.4
epididymis:
20.3
kidney:
12.3
male glands:
17.5
BEX5
ENSSSCG00000012514
ENSG00000184515
Brain expressed X-linked 5
Tissue enhanced
Detected in some
brain:
15.5
epididymis:
16.7
pineal gland:
13.7
pituitary gland:
42.9
BICDL1
ENSSSCG00000009896
ENSG00000135127
BICD family like cargo adaptor 1
Tissue enhanced
Detected in many
epididymis:
91.2
mesothelial tissue:
29.5
BLM
ENSSSCG00000001816
ENSG00000197299
Bloom syndrome protein
Tissue enhanced
Detected in all
epididymis:
26.5
C1orf228
ENSSSCG00000033259
ENSG00000198520
Chromosome 1 open reading frame 228
Tissue enhanced
Detected in many
epididymis:
26.3
testis:
16.2
C8orf34
ENSSSCG00000035887
ENSG00000165084
Chromosome 8 open reading frame 34
Tissue enhanced
Detected in all
epididymis:
54.5
CAMK1D
ENSSSCG00000011111
ENSG00000183049
Calcium/calmodulin-dependent protein kinase type 1D
Tissue enhanced
Detected in many
epididymis:
48.3
CAPS
ENSSSCG00000013532
ENSG00000105519
Calcyphosin isoform c
Tissue enhanced
Detected in some
choroid plexus:
28.3
epididymis:
42.8
lens:
97.7
CCDC129
ENSSSCG00000016671
ENSG00000180347
Coiled-coil domain containing 129
Tissue enhanced
Detected in many
epididymis:
18.5
salivary gland:
34.8
upper respiratory system:
27.9
CCDC138
ENSSSCG00000008135
ENSG00000163006
Coiled-coil domain containing 138
Tissue enhanced
Detected in all
epididymis:
47.3
CCNF
ENSSSCG00000026326
ENSG00000162063
Cyclin F
Tissue enhanced
Detected in many
epididymis:
32.5
lymphoid tissue:
15.4
CCR3
ENSSSCG00000024408
ENSG00000183625
C-C chemokine receptor type 3
Tissue enhanced
Detected in some
epididymis:
5.0
lymphoid tissue:
6.0
CDH8
ENSSSCG00000040687
ENSG00000150394
Cadherin 8
Tissue enhanced
Detected in some
brain:
27.5
epididymis:
29.0
pineal gland:
20.2
CDH9
ENSSSCG00000020845
ENSG00000113100
Cadherin 9
Tissue enhanced
Detected in some
brain:
18.1
epididymis:
5.9
CDRT4
ENSSSCG00000039792
ENSG00000239704
CMT1A duplicated region transcript 4
Tissue enhanced
Detected in many
epididymis:
18.5
testis:
33.6
CEP170B
ENSSSCG00000002558
ENSG00000099814
Centrosomal protein 170B
Tissue enhanced
Detected in many
epididymis:
69.4
CEP72
ENSSSCG00000031800
ENSG00000112877
Centrosomal protein 72
Tissue enhanced
Detected in some
epididymis:
8.9
lens:
12.3
stomach:
13.2
testis:
28.0
CES3
ENSSSCG00000024476
ENSG00000172828
Carboxylesterase 3 precursor
Tissue enhanced
Detected in many
epididymis:
32.4
liver:
96.5
CH25H
ENSSSCG00000010449
ENSG00000138135
Cholesterol 25-hydroxylase
Tissue enhanced
Detected in many
epididymis:
43.9
ovary:
26.5
CNDP1
ENSSSCG00000004869
ENSG00000150656
Beta-Ala-His dipeptidase
Tissue enhanced
Detected in many
brain:
15.7
epididymis:
26.7
kidney:
52.6
COL20A1
ENSSSCG00000037260
ENSG00000101203
Collagen type XX alpha 1 chain
Tissue enhanced
Detected in some
ductus deferens:
12.1
epididymis:
10.3
COL23A1
ENSSSCG00000014029
ENSG00000050767
Collagen type XXIII alpha 1 chain
Tissue enhanced
Detected in many
ductus deferens:
29.1
epididymis:
45.5
thyroid gland:
24.9
COLCA2
ENSSSCG00000015019
ENSG00000214290
Colorectal cancer associated 2
Tissue enhanced
Detected in many
adrenal gland:
39.6
epididymis:
35.6
liver:
28.3
stomach:
35.9
CRELD2
ENSSSCG00000000981
ENSG00000184164
Cysteine rich with EGF like domains 2
Tissue enhanced
Detected in many
epididymis:
37.6
CST6
ENSSSCG00000012960
ENSG00000175315
Cystatin E/M
Tissue enhanced
Detected in many
epididymis:
96.1
male glands:
81.3
skin:
99.4
DAB2
ENSSSCG00000016857
ENSG00000153071
DAB2, clathrin adaptor protein
Tissue enhanced
Detected in many
epididymis:
99.6
synovial tissue:
92.7
DCC
ENSSSCG00000040836
ENSG00000187323
DCC netrin 1 receptor
Tissue enhanced
Detected in some
brain:
20.5
epididymis:
22.8
male glands:
8.5
DISP3
ENSSSCG00000003417
ENSG00000204624
Dispatched RND transporter family member 3
Tissue enhanced
Detected in some
brain:
13.0
epididymis:
5.6
pineal gland:
13.9
retina:
5.4
DLG5
ENSSSCG00000026268
ENSG00000151208
Discs large MAGUK scaffold protein 5
Tissue enhanced
Detected in all
epididymis:
78.0
DNAH7
ENSSSCG00000032814
ENSG00000118997
Dynein axonemal heavy chain 7
Tissue enhanced
Detected in some
epididymis:
16.1
fallopian tube:
27.7
testis:
17.7
upper respiratory system:
16.9
Page
of 9 |
next »