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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other congenital disorders
Other diseases
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Subclass
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Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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201 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000039776
Tissue enriched
Detected in single
lymphoid tissue:
62.3
na
ENSSSCG00000039786
ENSG00000204695
Tissue enriched
Detected in single
lymphoid tissue:
7.0
na
ENSSSCG00000039839
Tissue enriched
Detected in some
lymphoid tissue:
19.5
na
ENSSSCG00000039846
Tissue enriched
Detected in single
lymphoid tissue:
16.3
na
ENSSSCG00000039956
Tissue enriched
Detected in some
lymphoid tissue:
12.3
na
ENSSSCG00000040050
Tissue enriched
Detected in single
lymphoid tissue:
2.9
na
ENSSSCG00000040081
Tissue enriched
Detected in some
lymphoid tissue:
15.6
na
ENSSSCG00000040142
Tissue enriched
Detected in single
lymphoid tissue:
19.2
na
ENSSSCG00000040161
Tissue enriched
Detected in single
lymphoid tissue:
1.1
na
ENSSSCG00000040276
Tissue enriched
Detected in some
lymphoid tissue:
17.4
na
ENSSSCG00000040283
Tissue enriched
Detected in single
lymphoid tissue:
21.7
na
ENSSSCG00000040534
ENSG00000158481
Tissue enriched
Detected in some
lymphoid tissue:
43.0
na
ENSSSCG00000040658
Tissue enriched
Detected in some
lymphoid tissue:
12.8
na
ENSSSCG00000040664
Tissue enriched
Detected in single
lymphoid tissue:
9.1
na
ENSSSCG00000040759
Tissue enriched
Detected in single
lymphoid tissue:
9.6
na
ENSSSCG00000040804
Tissue enriched
Detected in some
lymphoid tissue:
25.5
na
ENSSSCG00000040873
Tissue enriched
Detected in single
lymphoid tissue:
21.2
na
ENSSSCG00000040878
Tissue enriched
Detected in single
bone marrow:
2.2
na
ENSSSCG00000040924
Tissue enriched
Detected in single
bone marrow:
2.3
na
ENSSSCG00000040928
Tissue enriched
Detected in single
lymphoid tissue:
10.1
OR10K1
ENSSSCG00000036150
ENSG00000173285
Olfactory receptor family 10 subfamily K member 1
Tissue enriched
Detected in single
lymphoid tissue:
2.3
OR10K2
ENSSSCG00000006445
ENSG00000180708
Olfactory receptor family 10 subfamily K member 2
Tissue enriched
Detected in single
lymphoid tissue:
3.2
OR10T2
ENSSSCG00000030145
ENSG00000186306
Olfactory receptor family 10 subfamily T member 2
Tissue enriched
Detected in single
lymphoid tissue:
1.6
OR11L1
ENSSSCG00000013955
ENSG00000197591
Olfactory receptor family 11 subfamily L member 1
Tissue enriched
Detected in single
lymphoid tissue:
26.7
OR2G3
ENSSSCG00000013944
ENSG00000177476
Olfactory receptor family 2 subfamily G member 3
Tissue enriched
Detected in single
bone marrow:
1.0
OR6K6
ENSSSCG00000006425
ENSG00000180433
Olfactory receptor family 6 subfamily K member 6
Tissue enriched
Detected in some
lymphoid tissue:
14.1
OVCH2
ENSSSCG00000021619
ENSG00000183378
Ovochymase 2 (gene/pseudogene)
Tissue enriched
Detected in some
lymphoid tissue:
8.5
PMF1
ENSSSCG00000006493
ENSG00000160783
Polyamine-modulated factor 1
Tissue enriched
Detected in many
bone marrow:
42.4
PRSS16
ENSSSCG00000025410
ENSG00000112812
Serine protease 16
Tissue enriched
Detected in all
lymphoid tissue:
113.9
PRTN3
ENSSSCG00000013417
ENSG00000196415
Proteinase 3
Tissue enriched
Detected in some
bone marrow:
129.5
PSMB11
ENSSSCG00000002038
ENSG00000222028
Proteasome subunit beta 11
Tissue enriched
Detected in single
lymphoid tissue:
12.8
PTCRA
ENSSSCG00000001650
ENSG00000171611
Pre T-cell antigen receptor alpha isoform 1 precursor
Tissue enriched
Detected in some
lymphoid tissue:
52.8
RAG1
ENSSSCG00000026145
ENSG00000166349
V(D)J recombination-activating protein 1
Tissue enriched
Detected in single
lymphoid tissue:
164.0
RAG2
ENSSSCG00000034285
ENSG00000175097
V(D)J recombination-activating protein 2
Tissue enriched
Detected in many
lymphoid tissue:
40.3
RHOH
ENSSSCG00000008794
ENSG00000168421
Rho-related GTP-binding protein RhoH
Tissue enriched
Detected in many
lymphoid tissue:
70.4
RNASEH2B
ENSSSCG00000024385
ENSG00000136104
Ribonuclease H2 subunit B
Tissue enriched
Detected in all
lymphoid tissue:
109.6
SATB1
ENSSSCG00000011201
ENSG00000182568
SATB homeobox 1
Tissue enriched
Detected in many
lymphoid tissue:
199.2
SH2D1A
ENSSSCG00000012643
ENSG00000183918
SH2 domain-containing protein 1A
Tissue enriched
Detected in all
lymphoid tissue:
73.7
SIT1
ENSSSCG00000005312
ENSG00000137078
Signaling threshold regulating transmembrane adaptor 1
Tissue enriched
Detected in some
lymphoid tissue:
64.0
SLAMF1
ENSSSCG00000006380
ENSG00000117090
Signaling lymphocytic activation molecule precursor
Tissue enriched
Detected in all
lymphoid tissue:
49.1
SLC11A1
ENSSSCG00000039798
ENSG00000018280
Natural resistance-associated macrophage protein 1
Tissue enriched
Detected in some
lymphoid tissue:
65.1
TBXA2R
ENSSSCG00000033759
ENSG00000006638
Thromboxane A2 receptor
Tissue enriched
Detected in many
lymphoid tissue:
48.8
TCF7
ENSSSCG00000030680
ENSG00000081059
Transcription factor 7
Tissue enriched
Detected in many
lymphoid tissue:
169.9
THEMIS
ENSSSCG00000024392
ENSG00000172673
Thymocyte selection associated
Tissue enriched
Detected in some
lymphoid tissue:
49.1
TLR8
ENSSSCG00000012118
ENSG00000101916
Toll-like receptor 8 precursor
Tissue enriched
Detected in all
lymphoid tissue:
42.9
TMEM232
ENSSSCG00000014196
ENSG00000186952
Transmembrane protein 232
Tissue enriched
Detected in all
lymphoid tissue:
45.7
TRAV26-2
ENSSSCG00000039980
T cell receptor alpha variable 26-2
Tissue enriched
Detected in many
lymphoid tissue:
52.8
TRBV19
ENSSSCG00000016479
T cell receptor beta variable 19
Tissue enriched
Detected in some
lymphoid tissue:
62.0
TRDC
ENSSSCG00000022512
T cell receptor delta constant
Tissue enriched
Detected in many
lymphoid tissue:
67.6
UHRF1
ENSSSCG00000013517
ENSG00000276043
Ubiquitin like with PHD and ring finger domains 1
Tissue enriched
Detected in many
lymphoid tissue:
91.7
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