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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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13372 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000015193
Tissue enriched
Detected in some
testis:
9.0
na
ENSSSCG00000015215
Tissue enhanced
Detected in many
lymphoid tissue:
15.3
na
ENSSSCG00000015217
Secreted seminal-vesicle Ly-6 protein 1
Tissue enriched
Detected in some
epididymis:
26.7
na
ENSSSCG00000015293
Tissue enriched
Detected in many
testis:
31.9
na
ENSSSCG00000015294
ENSG00000203710
Tissue enriched
Detected in some
lymphoid tissue:
65.5
na
ENSSSCG00000015296
Tissue enriched
Detected in some
testis:
24.5
na
ENSSSCG00000015308
Tissue enhanced
Detected in many
mesothelial tissue:
16.1
na
ENSSSCG00000015316
Tissue enhanced
Detected in all
testis:
32.2
na
ENSSSCG00000015323
ENSG00000127928
Tissue enriched
Detected in some
retina:
304.2
na
ENSSSCG00000015337
Tissue enhanced
Detected in all
lens:
113.0
na
ENSSSCG00000015366
Tissue enriched
Detected in single
testis:
33.7
na
ENSSSCG00000015390
ENSG00000085563
ATP-binding cassette, sub-family B (MDR/TAP), member 1
Group enriched
Detected in many
adrenal gland:
120.4
ovary:
77.4
na
ENSSSCG00000015401
Tissue enhanced
Detected in many
brain:
38.3
epididymis:
15.9
pituitary gland:
19.6
retina:
23.8
na
ENSSSCG00000015405
ENSG00000135218
Platelet glycoprotein 4
Tissue enhanced
Detected in many
adipose tissue:
146.7
aorta:
64.1
heart:
72.5
skeletal muscle:
63.1
na
ENSSSCG00000015408
Tissue enhanced
Detected in many
adrenal gland:
36.9
na
ENSSSCG00000015433
ENSG00000128536
Group enriched
Detected in many
fallopian tube:
60.4
lung:
16.1
upper respiratory system:
25.3
na
ENSSSCG00000015447
Tissue enhanced
Detected in some
large intestine:
11.4
lymphoid tissue:
9.8
small intestine:
6.9
stomach:
7.3
na
ENSSSCG00000015460
Tissue enhanced
Detected in some
brain:
4.8
fallopian tube:
5.7
pituitary gland:
5.3
thyroid gland:
10.3
na
ENSSSCG00000015469
ENSG00000180658,ENSG00000243896
Tissue enhanced
Detected in some
small intestine:
3.3
thyroid gland:
2.5
na
ENSSSCG00000015473
ENSG00000163444
Transmembrane protein 183A
Tissue enhanced
Detected in all
male glands:
48.7
na
ENSSSCG00000015547
Tissue enhanced
Detected in many
epididymis:
6.1
na
ENSSSCG00000015564
Tissue enhanced
Detected in some
heart:
2.2
na
ENSSSCG00000015585
Tissue enhanced
Detected in many
male glands:
6.3
retina:
7.6
na
ENSSSCG00000015620
Tissue enhanced
Detected in some
brain:
2.9
dura mater:
4.0
fallopian tube:
1.3
na
ENSSSCG00000015632
ENSG00000106078
Tissue enhanced
Detected in many
heart:
43.9
kidney:
37.5
na
ENSSSCG00000015664
ENSG00000196352
Complement decay-accelerating factor precursor
Tissue enhanced
Detected in many
lymphoid tissue:
77.0
na
ENSSSCG00000015681
Group enriched
Detected in some
brain:
18.1
cervix:
9.1
pineal gland:
11.9
na
ENSSSCG00000015687
Tissue enhanced
Detected in many
large intestine:
6.6
lung:
6.6
lymphoid tissue:
9.5
na
ENSSSCG00000015691
ENSG00000115850
Group enriched
Detected in some
small intestine:
19.6
testis:
5.6
na
ENSSSCG00000015699
ENSG00000153086
Tissue enhanced
Detected in all
kidney:
35.4
liver:
17.5
na
ENSSSCG00000015708
Tissue enhanced
Detected in some
bone marrow:
1.1
mesothelial tissue:
1.7
testis:
1.0
na
ENSSSCG00000015747
ENSG00000036448
Group enriched
Detected in some
heart:
141.1
skeletal muscle:
83.1
na
ENSSSCG00000015773
Tissue enhanced
Detected in many
brain:
41.6
na
ENSSSCG00000015774
Tissue enhanced
Detected in many
lens:
49.4
na
ENSSSCG00000015806
Tissue enriched
Detected in single
testis:
78.9
na
ENSSSCG00000015814
ENSG00000147526
Tissue enhanced
Detected in all
smooth muscle:
107.7
na
ENSSSCG00000015823
ENSG00000156675
Tissue enhanced
Detected in all
stomach:
53.6
na
ENSSSCG00000015831
Tissue enhanced
Detected in some
brain:
1.4
fallopian tube:
1.6
male glands:
1.3
testis:
3.7
na
ENSSSCG00000015839
ENSG00000157168
Tissue enhanced
Detected in many
skin:
58.7
na
ENSSSCG00000015916
Tissue enriched
Detected in some
small intestine:
11.3
na
ENSSSCG00000015976
ENSG00000144320
Protein lunapark
Tissue enhanced
Detected in all
lens:
96.2
na
ENSSSCG00000016002
ENSG00000163492
Tissue enhanced
Detected in many
heart:
46.2
na
ENSSSCG00000016006
Tissue enhanced
Detected in many
cartilage:
108.6
male glands:
128.8
na
ENSSSCG00000016055
Tissue enriched
Detected in many
testis:
62.8
na
ENSSSCG00000016093
Aldehyde oxidase 2
Tissue enriched
Detected in some
upper respiratory system:
70.1
na
ENSSSCG00000016107
ENSG00000155754
Tissue enriched
Detected in some
testis:
83.2
na
ENSSSCG00000016119
ENSG00000173166
Tissue enhanced
Detected in all
liver:
87.6
na
ENSSSCG00000016152
Tissue enhanced
Detected in some
aorta:
2.0
lung:
1.5
lymphoid tissue:
1.0
testis:
1.1
na
ENSSSCG00000016161
Tissue enhanced
Detected in some
brain:
5.1
heart:
11.5
na
ENSSSCG00000016166
ENSG00000144451
Tissue enhanced
Detected in some
brain:
18.3
fallopian tube:
16.3
pituitary gland:
13.2
retina:
13.0
testis:
15.0
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