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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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89 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000034857
Tissue enriched
Detected in single
pituitary gland:
3.4
na
ENSSSCG00000035597
Tissue enriched
Detected in single
pituitary gland:
11.2
na
ENSSSCG00000035718
ENSG00000129673
Tissue enriched
Detected in some
pineal gland:
83.8
na
ENSSSCG00000037017
Tissue enriched
Detected in single
thyroid gland:
33.0
na
ENSSSCG00000037045
Tissue enriched
Detected in some
adrenal gland:
81.8
na
ENSSSCG00000037374
ENSG00000177275
Tissue enriched
Detected in single
pituitary gland:
4.2
na
ENSSSCG00000038159
ENSG00000279301
Tissue enriched
Detected in single
pituitary gland:
1.2
na
ENSSSCG00000038746
Tissue enriched
Detected in some
adrenal gland:
102.0
na
ENSSSCG00000039069
Tissue enriched
Detected in some
adrenal gland:
26.7
na
ENSSSCG00000039205
Tissue enriched
Detected in some
pineal gland:
79.1
NEUROD4
ENSSSCG00000035778
ENSG00000123307
Neuronal differentiation 4
Tissue enriched
Detected in some
pineal gland:
114.2
NEUROG1
ENSSSCG00000014309
ENSG00000181965
Neurogenin 1
Tissue enriched
Detected in some
pineal gland:
35.6
NNAT
ENSSSCG00000007336
ENSG00000053438
Neuronatin
Tissue enriched
Detected in many
pituitary gland:
708.6
NR5A1
ENSSSCG00000005588
ENSG00000136931
Steroidogenic factor 1
Tissue enriched
Detected in some
adrenal gland:
82.9
NRN1L
ENSSSCG00000032680
ENSG00000188038
Neuritin 1 like
Tissue enriched
Detected in some
pineal gland:
93.6
NTRK1
ENSSSCG00000006464
ENSG00000198400
Neurotrophic receptor tyrosine kinase 1
Tissue enriched
Detected in all
adrenal gland:
37.7
OPRD1
ENSSSCG00000027401
ENSG00000116329
Opioid receptor delta 1
Tissue enriched
Detected in some
thyroid gland:
34.7
OTOP1
ENSSSCG00000008731
ENSG00000163982
Otopetrin 1
Tissue enriched
Detected in single
thyroid gland:
66.7
P2RX3
ENSSSCG00000029468
ENSG00000109991
Purinergic receptor P2X 3
Tissue enriched
Detected in some
pineal gland:
41.8
PAPPA2
ENSSSCG00000015512
ENSG00000116183
Pappalysin 2
Tissue enriched
Detected in many
thyroid gland:
33.1
PCP2
ENSSSCG00000037188
ENSG00000174788
Purkinje cell protein 2
Tissue enriched
Detected in some
pineal gland:
127.4
PHOX2A
ENSSSCG00000014813
ENSG00000165462
Paired like homeobox 2a
Tissue enriched
Detected in some
adrenal gland:
56.4
PNMT
ENSSSCG00000017501
ENSG00000141744
Phenylethanolamine N-methyltransferase
Tissue enriched
Detected in some
adrenal gland:
75.1
POMC
ENSSSCG00000021155
ENSG00000115138
Pro-opiomelanocortin precursor
Tissue enriched
Detected in some
pituitary gland:
930.7
POU1F1
ENSSSCG00000011996
ENSG00000064835
Pituitary-specific positive transcription factor 1
Tissue enriched
Detected in many
pituitary gland:
76.5
PRL
ENSSSCG00000039721
ENSG00000172179
Prolactin precursor
Tissue enriched
Detected in some
pituitary gland:
654.6
PROP1
ENSSSCG00000029569
ENSG00000175325
Homeobox protein prophet of Pit-1
Tissue enriched
Detected in all
pituitary gland:
38.2
RP2
ENSSSCG00000027701
ENSG00000102218
RP2, ARL3 GTPase activating protein
Tissue enriched
Detected in all
thyroid gland:
99.4
SAAL1
ENSSSCG00000035393
ENSG00000166788
Serum amyloid A like 1
Tissue enriched
Detected in all
pineal gland:
170.2
SLC25A35
ENSSSCG00000022395
ENSG00000125434
Solute carrier family 25 member 35
Tissue enriched
Detected in many
pineal gland:
87.6
SLC26A10
ENSSSCG00000036029
ENSG00000135502
Solute carrier family 26 member 10
Tissue enriched
Detected in some
thyroid gland:
61.7
TBX19
ENSSSCG00000006299
ENSG00000143178
T-box 19
Tissue enriched
Detected in some
pituitary gland:
44.5
TG
ENSSSCG00000005948
ENSG00000042832
Thyroglobulin precursor
Tissue enriched
Detected in some
thyroid gland:
1006.8
TGFBR3L
ENSSSCG00000040598
ENSG00000260001
Transforming growth factor beta receptor 3 like
Tissue enriched
Detected in many
pituitary gland:
64.9
TPO
ENSSSCG00000033193
ENSG00000115705
Thyroid peroxidase
Tissue enriched
Detected in some
thyroid gland:
355.8
TSHB
ENSSSCG00000006749
ENSG00000134200
Thyrotropin subunit beta precursor
Tissue enriched
Detected in single
pituitary gland:
183.3
UBA6
ENSSSCG00000008924
ENSG00000033178
Ubiquitin like modifier activating enzyme 6
Tissue enriched
Detected in all
pituitary gland:
66.5
ZNF711
ENSSSCG00000021601
ENSG00000147180
Zinc finger protein 711
Tissue enriched
Detected in many
adrenal gland:
114.9
ZP4
ENSSSCG00000010141
ENSG00000116996
Zona pellucida sperm-binding protein 4 Processed zona pellucida sperm-binding protein 4
Tissue enriched
Detected in some
adrenal gland:
15.7
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