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Keyword
Chromosome
1
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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16867 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ERMP1
ENSSSCG00000005207
ENSG00000099219
Endoplasmic reticulum metallopeptidase 1
Low tissue specificity
Detected in all
ERN1
ENSSSCG00000017279
ENSG00000178607
Endoplasmic reticulum to nucleus signaling 1
Tissue enhanced
Detected in all
male glands:
88.8
salivary gland:
39.2
ERN2
ENSSSCG00000040637
ENSG00000134398
Endoplasmic reticulum to nucleus signaling 2
Tissue enhanced
Detected in many
esophagus:
43.7
male glands:
43.9
stomach:
58.7
ERO1A
ENSSSCG00000005037
ENSG00000197930
ERO1-like protein alpha
Low tissue specificity
Detected in all
ERO1B
ENSSSCG00000010148
ENSG00000086619
Endoplasmic reticulum oxidoreductase 1 beta
Tissue enhanced
Detected in all
ovary:
68.7
testis:
50.8
ERP27
ENSSSCG00000000605
ENSG00000139055
Endoplasmic reticulum protein 27
Low tissue specificity
Detected in all
ERP29
ENSSSCG00000009888
ENSG00000089248
Endoplasmic reticulum protein 29
Low tissue specificity
Detected in all
ERP44
ENSSSCG00000040634
ENSG00000023318
Endoplasmic reticulum resident protein 44 precursor
Low tissue specificity
Detected in all
ERRFI1
ENSSSCG00000035774
ENSG00000116285
ERBB receptor feedback inhibitor 1
Tissue enhanced
Detected in all
cartilage:
241.4
liver:
92.9
synovial tissue:
95.5
ESAM
ENSSSCG00000015200
ENSG00000149564
Endothelial cell adhesion molecule
Low tissue specificity
Detected in many
ESCO1
ENSSSCG00000003700
ENSG00000141446
Establishment of sister chromatid cohesion N-acetyltransferase 1
Low tissue specificity
Detected in all
ESCO2
ENSSSCG00000009670
ENSG00000171320
Establishment of sister chromatid cohesion N-acetyltransferase 2
Group enriched
Detected in many
lymphoid tissue:
10.9
testis:
37.1
ESD
ENSSSCG00000009407
ENSG00000139684
S-formylglutathione hydrolase
Tissue enhanced
Detected in all
lens:
91.2
ESF1
ENSSSCG00000007077
ENSG00000089048
ESF1 nucleolar pre-rRNA processing protein homolog
Low tissue specificity
Detected in all
ESPL1
ENSSSCG00000000265
ENSG00000135476
Extra spindle pole bodies like 1, separase
Tissue enhanced
Detected in many
lymphoid tissue:
12.6
testis:
25.7
ESPN
ENSSSCG00000003374
ENSG00000187017
Espin
Group enriched
Detected in many
epididymis:
92.1
retina:
24.2
testis:
77.5
ESRP2
ENSSSCG00000035227
ENSG00000103067
Epithelial splicing regulatory protein 2
Tissue enhanced
Detected in many
liver:
69.2
thyroid gland:
45.3
ESRRA
ENSSSCG00000013028
ENSG00000173153
Steroid hormone receptor ERR1
Tissue enhanced
Detected in all
male glands:
65.3
ESRRG
ENSSSCG00000010814
ENSG00000196482
Estrogen related receptor gamma
Tissue enhanced
Detected in many
kidney:
33.1
male glands:
23.1
salivary gland:
74.0
ESS2
ENSSSCG00000010114
ENSG00000100056
Ess-2 splicing factor homolog
Low tissue specificity
Detected in all
ESYT1
ENSSSCG00000000379
ENSG00000139641
Extended synaptotagmin 1
Low tissue specificity
Detected in all
ESYT2
ENSSSCG00000016406
ENSG00000117868
Extended synaptotagmin 2
Low tissue specificity
Detected in all
ESYT3
ENSSSCG00000027505
ENSG00000158220
Extended synaptotagmin 3
Tissue enhanced
Detected in many
skin:
39.5
ETAA1
ENSSSCG00000023908
ENSG00000143971
ETAA1, ATR kinase activator
Low tissue specificity
Detected in all
ETF1
ENSSSCG00000014337
ENSG00000120705
Eukaryotic translation termination factor 1
Low tissue specificity
Detected in all
ETFA
ENSSSCG00000001862
ENSG00000140374
Electron transfer flavoprotein subunit alpha, mitochondrial
Low tissue specificity
Detected in all
ETFB
ENSSSCG00000003229
ENSG00000105379
Electron transfer flavoprotein subunit beta
Low tissue specificity
Detected in all
ETFBKMT
ENSSSCG00000033766
ENSG00000139160
Electron transfer flavoprotein beta subunit lysine methyltransferase
Low tissue specificity
Detected in all
ETFDH
ENSSSCG00000008877
ENSG00000171503
Electron transfer flavoprotein dehydrogenase
Tissue enhanced
Detected in all
heart:
56.8
skeletal muscle:
62.0
ETFRF1
ENSSSCG00000033843
ENSG00000205707
Electron transfer flavoprotein regulatory factor 1
Low tissue specificity
Detected in all
ETHE1
ENSSSCG00000003064
ENSG00000105755
ETHE1, persulfide dioxygenase
Tissue enriched
Detected in all
large intestine:
109.6
ETNK1
ENSSSCG00000039397
ENSG00000139163
Ethanolamine kinase 1
Low tissue specificity
Detected in all
ETNK2
ENSSSCG00000015276
ENSG00000143845
Ethanolamine kinase 2
Tissue enriched
Detected in many
liver:
106.4
ETS1
ENSSSCG00000015235
ENSG00000134954
Protein C-ets-1
Tissue enhanced
Detected in many
lymphoid tissue:
101.2
ETS2
ENSSSCG00000038948
ENSG00000157557
ETS proto-oncogene 2, transcription factor
Low tissue specificity
Detected in many
ETV1
ENSSSCG00000024591
ENSG00000006468
ETS variant 1
Tissue enhanced
Detected in many
brain:
74.2
pituitary gland:
52.5
salivary gland:
97.0
ETV2
ENSSSCG00000002906
ENSG00000105672
ETS variant 2
Low tissue specificity
Detected in all
ETV3
ENSSSCG00000024970
ENSG00000117036
ETS variant 3
Low tissue specificity
Detected in all
ETV4
ENSSSCG00000017379
ENSG00000175832
ETS variant 4
Tissue enhanced
Detected in many
cartilage:
59.6
ETV5
ENSSSCG00000023229
ENSG00000244405
ETS translocation variant 5
Tissue enhanced
Detected in all
cartilage:
36.1
ETV6
ENSSSCG00000024152
ENSG00000139083
ETS variant 6
Low tissue specificity
Detected in all
EVA1A
ENSSSCG00000035958
ENSG00000115363
Eva-1 homolog A, regulator of programmed cell death
Group enriched
Detected in all
liver:
81.2
male glands:
20.9
EVA1B
ENSSSCG00000033892
ENSG00000142694
Eva-1 homolog B
Tissue enhanced
Detected in many
cartilage:
51.6
EVA1C
ENSSSCG00000021598
ENSG00000166979
Eva-1 homolog C
Tissue enhanced
Detected in all
mesothelial tissue:
39.7
EVC
ENSSSCG00000032637
ENSG00000072840
EvC ciliary complex subunit 1
Tissue enhanced
Detected in all
kidney:
55.2
EVC2
ENSSSCG00000024399
ENSG00000173040
EvC ciliary complex subunit 2
Tissue enhanced
Detected in all
kidney:
32.2
EVI2B
ENSSSCG00000017750
ENSG00000185862
Ecotropic viral integration site 2B
Tissue enhanced
Detected in all
lymphoid tissue:
44.5
EVI5
ENSSSCG00000006901
ENSG00000067208
Ecotropic viral integration site 5
Low tissue specificity
Detected in all
EVI5L
ENSSSCG00000013585
ENSG00000142459
Ecotropic viral integration site 5 like
Low tissue specificity
Detected in all
EVL
ENSSSCG00000037105
ENSG00000196405
Ena/VASP-like protein
Tissue enhanced
Detected in all
lymphoid tissue:
112.9
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