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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Keyword
Chromosome
1
2
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
Male glands
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Mouth
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15143 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
FAM126A
ENSSSCG00000015386
ENSG00000122591
Family with sequence similarity 126 member A
Low tissue specificity
Detected in all
FAM126B
ENSSSCG00000036339
ENSG00000155744
Family with sequence similarity 126 member B
Tissue enhanced
Detected in all
brain:
41.8
FAM129A
ENSSSCG00000015567
ENSG00000135842
Protein Niban
Tissue enhanced
Detected in many
male glands:
84.4
salivary gland:
83.6
smooth muscle:
60.1
FAM129B
ENSSSCG00000005614
ENSG00000136830
Family with sequence similarity 129 member B
Low tissue specificity
Detected in many
FAM129C
ENSSSCG00000013882
ENSG00000167483
Family with sequence similarity 129 member C
Low tissue specificity
Detected in all
FAM131A
ENSSSCG00000028372
ENSG00000175182
Protein FAM131A
Tissue enriched
Detected in many
brain:
35.6
FAM131C
ENSSSCG00000003470
ENSG00000185519
Family with sequence similarity 131 member C
Tissue enhanced
Detected in all
stomach:
49.5
FAM135A
ENSSSCG00000004275
ENSG00000082269
Family with sequence similarity 135 member A
Low tissue specificity
Detected in all
FAM13B
ENSSSCG00000029125
ENSG00000031003
Family with sequence similarity 13 member B
Low tissue specificity
Detected in all
FAM13C
ENSSSCG00000010209
ENSG00000148541
Family with sequence similarity 13 member C
Low tissue specificity
Detected in many
FAM149A
ENSSSCG00000015802
ENSG00000109794
Family with sequence similarity 149 member A
Tissue enriched
Detected in many
lens:
125.8
FAM149B1
ENSSSCG00000026898
ENSG00000138286
Family with sequence similarity 149 member B1
Low tissue specificity
Detected in all
FAM151B
ENSSSCG00000014123
ENSG00000152380
Family with sequence similarity 151 member B
Low tissue specificity
Detected in all
FAM155B
ENSSSCG00000012386
ENSG00000130054
Family with sequence similarity 155 member B
Tissue enhanced
Detected in all
heart:
38.3
FAM160A1
ENSSSCG00000020717
ENSG00000164142
Family with sequence similarity 160 member A1
Low tissue specificity
Detected in all
FAM160A2
ENSSSCG00000014632
ENSG00000051009
Family with sequence similarity 160 member A2
Low tissue specificity
Detected in all
FAM160B1
ENSSSCG00000010652
ENSG00000151553
Family with sequence similarity 160 member B1
Low tissue specificity
Detected in all
FAM160B2
ENSSSCG00000009614
ENSG00000158863
Family with sequence similarity 160 member B2
Low tissue specificity
Detected in all
FAM161A
ENSSSCG00000008378
ENSG00000170264
Family with sequence similarity 161 member A
Tissue enhanced
Detected in all
testis:
68.3
FAM161B
ENSSSCG00000002353
ENSG00000156050
Family with sequence similarity 161 member B
Tissue enhanced
Detected in all
lens:
45.4
FAM162A
ENSSSCG00000026990
ENSG00000114023
Protein FAM162A
Tissue enhanced
Detected in all
skeletal muscle:
58.8
FAM162B
ENSSSCG00000038522
ENSG00000183807
Family with sequence similarity 162 member B
Tissue enhanced
Detected in many
pituitary gland:
29.7
salivary gland:
30.9
FAM163A
ENSSSCG00000033352
ENSG00000143340
Family with sequence similarity 163 member A
Tissue enhanced
Detected in all
adrenal gland:
38.7
FAM167B
ENSSSCG00000003616
ENSG00000183615
Family with sequence similarity 167 member B
Low tissue specificity
Detected in many
FAM168A
ENSSSCG00000039996
ENSG00000054965
Family with sequence similarity 168 member A
Tissue enhanced
Detected in all
brain:
41.2
FAM168B
ENSSSCG00000033126
ENSG00000152102
Family with sequence similarity 168 member B
Low tissue specificity
Detected in all
FAM171A1
ENSSSCG00000011047
ENSG00000148468
Family with sequence similarity 171 member A1
Low tissue specificity
Detected in all
FAM171A2
ENSSSCG00000017356
ENSG00000161682
Family with sequence similarity 171 member A2
Tissue enhanced
Detected in many
kidney:
29.7
male glands:
22.8
FAM172A
ENSSSCG00000027608
ENSG00000113391
Family with sequence similarity 172 member A
Low tissue specificity
Detected in all
FAM173A
ENSSSCG00000008004
ENSG00000103254
Family with sequence similarity 173 member A
Low tissue specificity
Detected in all
FAM173B
ENSSSCG00000036387
ENSG00000150756
Family with sequence similarity 173 member B
Low tissue specificity
Detected in all
FAM174A
ENSSSCG00000014179
ENSG00000174132
Family with sequence similarity 174 member A
Low tissue specificity
Detected in all
FAM174B
ENSSSCG00000002265
ENSG00000185442
Family with sequence similarity 174 member B
Tissue enhanced
Detected in many
male glands:
122.3
FAM177A1
ENSSSCG00000034753
ENSG00000151327
Protein FAM177A1
Low tissue specificity
Detected in all
FAM180A
ENSSSCG00000036403
ENSG00000189320
Family with sequence similarity 180 member A
Tissue enhanced
Detected in many
cartilage:
24.4
dura mater:
28.3
FAM180B
ENSSSCG00000013230
ENSG00000196666
Family with sequence similarity 180 member B
Tissue enhanced
Detected in some
aorta:
7.2
dura mater:
24.6
vagus nerve:
15.5
FAM184B
ENSSSCG00000026232
ENSG00000047662
Family with sequence similarity 184 member B
Tissue enhanced
Detected in many
epididymis:
37.2
esophagus:
17.9
FAM185A
ENSSSCG00000015414
ENSG00000222011
Family with sequence similarity 185 member A
Low tissue specificity
Detected in all
FAM186B
ENSSSCG00000000205
ENSG00000135436
Family with sequence similarity 186 member B
Group enriched
Detected in all
epididymis:
9.8
testis:
35.7
FAM189A2
ENSSSCG00000005249
ENSG00000135063
Family with sequence similarity 189 member A2
Tissue enriched
Detected in many
thyroid gland:
101.3
FAM189B
ENSSSCG00000006521
ENSG00000160767
Family with sequence similarity 189 member B
Low tissue specificity
Detected in all
FAM192A
ENSSSCG00000034414
ENSG00000172775
Family with sequence similarity 192 member A
Low tissue specificity
Detected in all
FAM193A
ENSSSCG00000029745
ENSG00000125386
Family with sequence similarity 193 member A
Low tissue specificity
Detected in all
FAM193B
ENSSSCG00000014038
ENSG00000146067
Protein FAM193B
Low tissue specificity
Detected in all
FAM196B
ENSSSCG00000017010
ENSG00000204767
Family with sequence similarity 196 member B
Tissue enhanced
Detected in many
lymphoid tissue:
22.6
FAM198A
ENSSSCG00000011294
ENSG00000144649
Family with sequence similarity 198 member A
Tissue enhanced
Detected in many
dura mater:
40.3
FAM198B
ENSSSCG00000008873
ENSG00000164125
Family with sequence similarity 198 member B
Low tissue specificity
Detected in all
FAM199X
ENSSSCG00000012542
ENSG00000123575
Family with sequence similarity 199, X-linked
Low tissue specificity
Detected in all
FAM200A
ENSSSCG00000029175
ENSG00000221909
Family with sequence similarity 200 member A
Low tissue specificity
Detected in all
FAM207A
ENSSSCG00000028571
ENSG00000160256
Family with sequence similarity 207 member A
Low tissue specificity
Detected in all
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