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Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Keyword
Chromosome
1
2
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6
7
8
9
10
11
12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Lymphoid tissue
Male glands
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Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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16194 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
BTBD19
ENSSSCG00000003926
ENSG00000222009
BTB domain containing 19
Low tissue specificity
Detected in all
BTBD2
ENSSSCG00000013444
ENSG00000133243
BTB domain containing 2
Low tissue specificity
Detected in all
BTBD3
ENSSSCG00000020853
ENSG00000132640
BTB domain containing 3
Tissue enhanced
Detected in all
brain:
64.1
BTBD6
ENSSSCG00000035555
ENSG00000184887
BTB domain containing 6
Tissue enhanced
Detected in all
lens:
63.4
skeletal muscle:
66.5
BTBD7
ENSSSCG00000002461
ENSG00000011114
BTB domain containing 7
Low tissue specificity
Detected in all
BTBD8
ENSSSCG00000035196
ENSG00000189195
BTB domain containing 8
Tissue enhanced
Detected in all
brain:
26.7
pineal gland:
66.6
BTBD9
ENSSSCG00000037507
ENSG00000183826
BTB/POZ domain-containing protein 9
Low tissue specificity
Detected in all
BTD
ENSSSCG00000011193
ENSG00000169814
Biotinidase
Low tissue specificity
Detected in all
BTF3L4
ENSSSCG00000038762
ENSG00000134717
Basic transcription factor 3 like 4
Low tissue specificity
Detected in all
BTG1
ENSSSCG00000035790
ENSG00000133639
Protein BTG1
Low tissue specificity
Detected in all
BTG2
ENSSSCG00000028322
ENSG00000159388
Protein BTG2
Low tissue specificity
Detected in many
BTK
ENSSSCG00000026742
ENSG00000010671
Tyrosine-protein kinase BTK
Tissue enhanced
Detected in many
lymphoid tissue:
33.5
upper respiratory system:
17.9
BTN1A1
ENSSSCG00000001132
ENSG00000124557
Butyrophilin subfamily 1 member A1
Low tissue specificity
Detected in all
BTNL2
ENSSSCG00000025071
ENSG00000204290
Butyrophilin like 2
Tissue enriched
Detected in some
small intestine:
46.2
BTRC
ENSSSCG00000010563
ENSG00000166167
Beta-transducin repeat containing E3 ubiquitin protein ligase
Low tissue specificity
Detected in all
BUB1B
ENSSSCG00000004782
ENSG00000156970
BUB1 mitotic checkpoint serine/threonine kinase B
Tissue enhanced
Detected in many
lymphoid tissue:
29.6
testis:
17.7
BUB3
ENSSSCG00000010726
ENSG00000154473
BUB3, mitotic checkpoint protein
Low tissue specificity
Detected in all
BUD13
ENSSSCG00000015065
ENSG00000137656
BUD13 homolog
Low tissue specificity
Detected in all
BUD23
ENSSSCG00000007713
ENSG00000071462
BUD23, rRNA methyltransferase and ribosome maturation factor
Tissue enhanced
Detected in all
lens:
71.2
BUD31
ENSSSCG00000007623
ENSG00000106245
BUD31 homolog
Low tissue specificity
Detected in all
BVES
ENSSSCG00000004366
ENSG00000112276
Blood vessel epicardial substance
Tissue enhanced
Detected in many
heart:
27.4
male glands:
20.3
skeletal muscle:
28.5
smooth muscle:
22.7
BYSL
ENSSSCG00000026752
ENSG00000112578
Bystin
Low tissue specificity
Detected in all
BZW1
ENSSSCG00000016094
ENSG00000082153
Basic leucine zipper and W2 domain-containing protein 1
Low tissue specificity
Detected in all
BZW2
ENSSSCG00000023118
ENSG00000136261
Basic leucine zipper and W2 domain-containing protein 2
Tissue enhanced
Detected in all
heart:
53.5
skeletal muscle:
61.8
C10orf76
ENSSSCG00000010571
ENSG00000120029
Chromosome 10 open reading frame 76
Low tissue specificity
Detected in all
C10orf82
ENSSSCG00000034237
ENSG00000165863
Chromosome 10 open reading frame 82
Low tissue specificity
Detected in all
C11orf42
ENSSSCG00000014634
ENSG00000180878
Chromosome 11 open reading frame 42
Tissue enriched
Detected in many
testis:
79.1
C11orf49
ENSSSCG00000013246
ENSG00000149179
UPF0705 protein C11orf49 homolog
Tissue enhanced
Detected in many
brain:
19.7
pineal gland:
15.8
testis:
20.2
C11orf52
ENSSSCG00000015035
ENSG00000149300
Chromosome 11 open reading frame 52
Low tissue specificity
Detected in all
C11orf53
ENSSSCG00000015018
ENSG00000150750
Chromosome 11 open reading frame 53
Tissue enhanced
Detected in many
stomach:
10.8
upper respiratory system:
18.7
C11orf54
ENSSSCG00000014948
ENSG00000182919
Ester hydrolase C11orf54 homolog
Low tissue specificity
Detected in all
C11orf58
ENSSSCG00000040570
ENSG00000110696
Small acidic protein
Low tissue specificity
Detected in all
C11orf65
ENSSSCG00000015008
ENSG00000166323
Chromosome 11 open reading frame 65
Low tissue specificity
Detected in all
C11orf68
ENSSSCG00000012966
ENSG00000175573
Chromosome 11 open reading frame 68
Low tissue specificity
Detected in all
C11orf74
ENSSSCG00000035489
ENSG00000166352
Chromosome 11 open reading frame 74
Low tissue specificity
Detected in all
C11orf86
ENSSSCG00000040729
ENSG00000173237
Chromosome 11 open reading frame 86
Group enriched
Detected in some
large intestine:
41.5
small intestine:
30.0
C11orf95
ENSSSCG00000031666
ENSG00000188070
Chromosome 11 open reading frame 95
Low tissue specificity
Detected in all
C11orf96
ENSSSCG00000039182
ENSG00000187479
Chromosome 11 open reading frame 96
Tissue enhanced
Detected in many
aorta:
137.7
gallbladder:
125.2
C11orf97
ENSSSCG00000014957
ENSG00000257057
Chromosome 11 open reading frame 97
Low tissue specificity
Detected in all
C12orf10
ENSSSCG00000000267
ENSG00000139637
Chromosome 12 open reading frame 10
Low tissue specificity
Detected in all
C12orf29
ENSSSCG00000000925
ENSG00000133641
Uncharacterized protein C12orf29 homolog
Tissue enhanced
Detected in all
lens:
32.6
C12orf4
ENSSSCG00000000723
ENSG00000047621
homolog isoform 2
Low tissue specificity
Detected in all
C12orf43
ENSSSCG00000024329
ENSG00000157895
Chromosome 12 open reading frame 43
Low tissue specificity
Detected in all
C12orf45
ENSSSCG00000027792
ENSG00000151131
Uncharacterized protein C12orf45 homolog
Low tissue specificity
Detected in all
C12orf49
ENSSSCG00000035873
ENSG00000111412
Chromosome 12 open reading frame 49
Low tissue specificity
Detected in all
C12orf57
ENSSSCG00000040186
ENSG00000111678
Protein C10
Low tissue specificity
Detected in all
C12orf65
ENSSSCG00000009774
ENSG00000130921
Chromosome 12 open reading frame 65
Low tissue specificity
Detected in all
C12orf66
ENSSSCG00000039258
ENSG00000174206
Chromosome 12 open reading frame 66
Low tissue specificity
Detected in all
C12orf73
ENSSSCG00000032910
ENSG00000204954
Chromosome 12 open reading frame 73
Low tissue specificity
Detected in all
C12orf75
ENSSSCG00000031661
ENSG00000235162
Chromosome 12 open reading frame 75
Low tissue specificity
Detected in many
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