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Human disease related genes
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Disease
Keyword
Chromosome
1
2
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6
7
8
9
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12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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14549 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
DTYMK
ENSSSCG00000034147
ENSG00000168393
Deoxythymidylate kinase
Low tissue specificity
Detected in all
DUPD1
ENSSSCG00000010317
ENSG00000188716
Dual specificity phosphatase and pro isomerase domain containing 1
Tissue enhanced
Detected in all
skeletal muscle:
28.3
DUS1L
ENSSSCG00000040352
ENSG00000169718
Dihydrouridine synthase 1 like
Low tissue specificity
Detected in all
DUS2
ENSSSCG00000022098
ENSG00000167264
Dihydrouridine synthase 2
Low tissue specificity
Detected in all
DUS4L
ENSSSCG00000028433
ENSG00000105865
Dihydrouridine synthase 4 like
Tissue enhanced
Detected in all
lens:
45.3
DUSP1
ENSSSCG00000016991
ENSG00000120129
Dual specificity protein phosphatase 1
Tissue enhanced
Detected in all
male glands:
173.1
DUSP10
ENSSSCG00000010831
ENSG00000143507
Dual specificity phosphatase 10
Low tissue specificity
Detected in many
DUSP11
ENSSSCG00000008298
ENSG00000144048
Dual specificity phosphatase 11
Low tissue specificity
Detected in all
DUSP12
ENSSSCG00000006347
ENSG00000081721
Dual specificity phosphatase 12
Low tissue specificity
Detected in all
DUSP13
ENSSSCG00000035105
ENSG00000079393
Dual specificity protein phosphatase 13
Tissue enriched
Detected in some
skeletal muscle:
54.0
DUSP14
ENSSSCG00000029874
ENSG00000276023
Dual specificity phosphatase 14
Low tissue specificity
Detected in all
DUSP15
ENSSSCG00000007232
ENSG00000149599
Dual specificity phosphatase 15
Group enriched
Detected in many
testis:
74.0
vagus nerve:
20.7
DUSP16
ENSSSCG00000032097
ENSG00000111266
Dual specificity phosphatase 16
Low tissue specificity
Detected in all
DUSP19
ENSSSCG00000016020
ENSG00000162999
Dual specificity phosphatase 19
Low tissue specificity
Detected in all
DUSP2
ENSSSCG00000035971
ENSG00000158050
Dual specificity phosphatase 2
Low tissue specificity
Detected in all
DUSP22
ENSSSCG00000031489
ENSG00000112679
Dual specificity phosphatase 22
Low tissue specificity
Detected in all
DUSP23
ENSSSCG00000033585
ENSG00000158716
Dual specificity phosphatase 23
Low tissue specificity
Detected in all
DUSP26
ENSSSCG00000015835
ENSG00000133878
Dual specificity phosphatase 26
Tissue enhanced
Detected in some
brain:
26.3
heart:
19.2
retina:
17.4
skeletal muscle:
49.5
DUSP27
ENSSSCG00000006311
ENSG00000198842
Dual specificity phosphatase 27, atypical
Group enriched
Detected in some
heart:
19.4
skeletal muscle:
44.7
DUSP28
ENSSSCG00000028180
ENSG00000188542
Dual specificity phosphatase 28
Low tissue specificity
Detected in all
DUSP3
ENSSSCG00000020744
ENSG00000108861
Dual specificity phosphatase 3
Low tissue specificity
Detected in all
DUSP4
ENSSSCG00000015850
ENSG00000120875
Dual specificity phosphatase 4
Tissue enhanced
Detected in many
ovary:
53.6
DUSP6
ENSSSCG00000037910
ENSG00000139318
Dual specificity protein phosphatase 6
Low tissue specificity
Detected in many
DUSP7
ENSSSCG00000011430
ENSG00000164086
Dual specificity phosphatase 7
Low tissue specificity
Detected in all
DUSP8
ENSSSCG00000032911
ENSG00000184545
Dual specificity phosphatase 8
Tissue enhanced
Detected in many
brain:
29.0
heart:
28.8
DUT
ENSSSCG00000032141
ENSG00000128951
Deoxyuridine triphosphatase
Low tissue specificity
Detected in all
DVL1
ENSSSCG00000003342
ENSG00000107404
Dishevelled segment polarity protein 1
Low tissue specificity
Detected in all
DVL2
ENSSSCG00000025689
ENSG00000004975
Dishevelled segment polarity protein 2
Low tissue specificity
Detected in all
DVL3
ENSSSCG00000025374
ENSG00000161202
Dishevelled segment polarity protein 3
Low tissue specificity
Detected in all
DXO
ENSSSCG00000001425
ENSG00000204348
Decapping and exoribonuclease protein
Low tissue specificity
Detected in all
DYDC2
ENSSSCG00000010339
ENSG00000133665
DPY30 domain containing 2
Tissue enhanced
Detected in all
fallopian tube:
26.6
upper respiratory system:
26.8
DYM
ENSSSCG00000004508
ENSG00000141627
Dymeclin
Low tissue specificity
Detected in all
DYNC1H1
ENSSSCG00000040738
ENSG00000197102
Dynein cytoplasmic 1 heavy chain 1
Low tissue specificity
Detected in all
DYNC1I1
ENSSSCG00000015335
ENSG00000158560
Dynein cytoplasmic 1 intermediate chain 1
Group enriched
Detected in many
brain:
30.5
lens:
119.7
DYNC1I2
ENSSSCG00000015948
ENSG00000077380
Cytoplasmic dynein 1 intermediate chain 2
Low tissue specificity
Detected in all
DYNC1LI1
ENSSSCG00000011233
ENSG00000144635
Dynein cytoplasmic 1 light intermediate chain 1
Low tissue specificity
Detected in all
DYNC1LI2
ENSSSCG00000036210
ENSG00000135720
Cytoplasmic dynein 1 light intermediate chain 2
Tissue enhanced
Detected in all
brain:
65.2
DYNC2LI1
ENSSSCG00000038383
ENSG00000138036
Dynein cytoplasmic 2 light intermediate chain 1
Low tissue specificity
Detected in all
DYNLL1
ENSSSCG00000009904
ENSG00000088986
Dynein light chain 1, cytoplasmic
Low tissue specificity
Detected in all
DYNLL2
ENSSSCG00000020962
ENSG00000264364
Dynein light chain LC8-type 2
Low tissue specificity
Detected in all
DYNLRB1
ENSSSCG00000037510
ENSG00000125971
Dynein light chain roadblock-type 1
Low tissue specificity
Detected in all
DYNLRB2
ENSSSCG00000031421
ENSG00000168589
Dynein light chain roadblock-type 2
Tissue enhanced
Detected in many
choroid plexus:
44.0
fallopian tube:
41.6
upper respiratory system:
44.9
DYNLT1
ENSSSCG00000033107
ENSG00000146425
Dynein light chain Tctex-type 1
Tissue enhanced
Detected in all
male glands:
52.6
DYNLT3
ENSSSCG00000028908
ENSG00000165169
Dynein light chain Tctex-type 3
Low tissue specificity
Detected in all
DYRK1A
ENSSSCG00000030480
ENSG00000157540
Dual specificity tyrosine phosphorylation regulated kinase 1A
Low tissue specificity
Detected in all
DYRK1B
ENSSSCG00000027197
ENSG00000105204
Dual specificity tyrosine phosphorylation regulated kinase 1B
Tissue enhanced
Detected in all
skeletal muscle:
71.1
DYRK2
ENSSSCG00000000958
ENSG00000127334
Dual specificity tyrosine phosphorylation regulated kinase 2
Low tissue specificity
Detected in all
DYRK3
ENSSSCG00000015649
ENSG00000143479
Dual specificity tyrosine phosphorylation regulated kinase 3
Tissue enhanced
Detected in all
lens:
49.1
testis:
37.9
DYSF
ENSSSCG00000008312
ENSG00000135636
Dysferlin
Tissue enhanced
Detected in all
skeletal muscle:
45.7
DZANK1
ENSSSCG00000007094
ENSG00000089091
Double zinc ribbon and ankyrin repeat domains 1
Tissue enhanced
Detected in all
brain:
81.4
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