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Human disease related genes
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Keyword
Chromosome
1
2
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7
8
9
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12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
Male glands
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Mouth
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15625 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ACTR3B
ENSSSCG00000016426
ENSG00000133627
ARP3 actin related protein 3 homolog B
Low tissue specificity
Detected in all
ACTR5
ENSSSCG00000007349
ENSG00000101442
ARP5 actin related protein 5 homolog
Low tissue specificity
Detected in all
ACTR6
ENSSSCG00000025682
ENSG00000075089
ARP6 actin related protein 6 homolog
Low tissue specificity
Detected in all
ACTR8
ENSSSCG00000011458
ENSG00000113812
ARP8 actin related protein 8 homolog
Low tissue specificity
Detected in all
ACVR1
ENSSSCG00000015874
ENSG00000115170
Activin A receptor type 1
Tissue enhanced
Detected in all
cartilage:
70.9
ACVR1B
ENSSSCG00000000233
ENSG00000135503
Activin receptor type-1B precursor
Low tissue specificity
Detected in all
ACVR2A
ENSSSCG00000015669
ENSG00000121989
Activin receptor type-2A precursor
Tissue enhanced
Detected in all
lens:
65.2
ACVR2B
ENSSSCG00000011257
ENSG00000114739
Activin receptor type-2B precursor
Tissue enhanced
Detected in all
skeletal muscle:
35.6
ACVRL1
ENSSSCG00000000232
ENSG00000139567
Activin A receptor like type 1
Low tissue specificity
Detected in many
ACYP2
ENSSSCG00000025224
ENSG00000170634
Acylphosphatase 2
Tissue enhanced
Detected in many
brain:
31.1
skeletal muscle:
48.5
ADA2
ENSSSCG00000035218
ENSG00000093072
Adenosine deaminase 2 precursor
Tissue enhanced
Detected in all
lymphoid tissue:
41.2
ADAL
ENSSSCG00000004710
ENSG00000168803
Adenosine deaminase like
Low tissue specificity
Detected in all
ADAM10
ENSSSCG00000004595
ENSG00000137845
Disintegrin and metalloproteinase domain-containing protein 10 precursor
Low tissue specificity
Detected in all
ADAM11
ENSSSCG00000017349
ENSG00000073670
ADAM metallopeptidase domain 11
Tissue enhanced
Detected in all
brain:
25.4
ADAM15
ENSSSCG00000006533
ENSG00000143537
ADAM metallopeptidase domain 15
Low tissue specificity
Detected in all
ADAM17
ENSSSCG00000008641
ENSG00000151694
Disintegrin and metalloproteinase domain-containing protein 17 precursor
Low tissue specificity
Detected in all
ADAM19
ENSSSCG00000017052
ENSG00000135074
ADAM metallopeptidase domain 19
Low tissue specificity
Detected in many
ADAM22
ENSSSCG00000015297
ENSG00000008277
ADAM metallopeptidase domain 22
Tissue enriched
Detected in many
brain:
51.4
ADAM23
ENSSSCG00000016131
ENSG00000114948
ADAM metallopeptidase domain 23
Tissue enhanced
Detected in many
brain:
34.4
vagus nerve:
14.1
ADAM28
ENSSSCG00000009644
ENSG00000042980
ADAM metallopeptidase domain 28
Tissue enhanced
Detected in all
epididymis:
81.1
urinary bladder:
46.5
ADAM7
ENSSSCG00000009646
ENSG00000069206
ADAM metallopeptidase domain 7
Tissue enriched
Detected in many
epididymis:
248.0
ADAM9
ENSSSCG00000015808
ENSG00000168615
ADAM metallopeptidase domain 9
Low tissue specificity
Detected in all
ADAMTS10
ENSSSCG00000026994
ENSG00000142303
A disintegrin and metalloproteinase with thrombospondin motifs 10 precursor
Low tissue specificity
Detected in many
ADAMTS12
ENSSSCG00000016816
ENSG00000151388
ADAM metallopeptidase with thrombospondin type 1 motif 12
Low tissue specificity
Detected in many
ADAMTS14
ENSSSCG00000010272
ENSG00000138316
ADAM metallopeptidase with thrombospondin type 1 motif 14
Tissue enhanced
Detected in many
cornea:
22.4
ADAMTS16
ENSSSCG00000017109
ENSG00000145536
ADAM metallopeptidase with thrombospondin type 1 motif 16
Group enriched
Detected in many
adipose tissue:
7.9
ductus deferens:
7.0
epididymis:
8.9
kidney:
21.0
mesothelial tissue:
25.6
ADAMTS17
ENSSSCG00000038452
ENSG00000140470
ADAM metallopeptidase with thrombospondin type 1 motif 17
Tissue enriched
Detected in many
lens:
63.4
ADAMTS2
ENSSSCG00000024043
ENSG00000087116
ADAM metallopeptidase with thrombospondin type 1 motif 2
Tissue enhanced
Detected in many
mesothelial tissue:
31.9
ADAMTS3
ENSSSCG00000038180
ENSG00000156140
ADAM metallopeptidase with thrombospondin type 1 motif 3
Tissue enhanced
Detected in many
cartilage:
37.5
ADAMTS6
ENSSSCG00000016943
ENSG00000049192
ADAM metallopeptidase with thrombospondin type 1 motif 6
Tissue enhanced
Detected in all
cartilage:
53.8
ADAMTS9
ENSSSCG00000011496
ENSG00000163638
ADAM metallopeptidase with thrombospondin type 1 motif 9
Tissue enhanced
Detected in many
mesothelial tissue:
68.1
ADAMTSL1
ENSSSCG00000040366
ENSG00000178031
ADAMTS like 1
Tissue enhanced
Detected in all
synovial tissue:
31.6
ADAMTSL3
ENSSSCG00000001793
ENSG00000156218
ADAMTS like 3
Tissue enriched
Detected in many
cartilage:
99.8
ADAP2
ENSSSCG00000017738
ENSG00000184060
Arf-GAP with dual PH domain-containing protein 2
Low tissue specificity
Detected in all
ADAR
ENSSSCG00000006543
ENSG00000160710
Adenosine deaminase, RNA specific
Low tissue specificity
Detected in all
ADARB1
ENSSSCG00000012089
ENSG00000197381
Adenosine deaminase, RNA specific B1
Low tissue specificity
Detected in all
ADARB2
ENSSSCG00000011160
ENSG00000185736
Adenosine deaminase, RNA specific B2 (inactive)
Tissue enhanced
Detected in many
brain:
20.3
male glands:
16.5
ADAT1
ENSSSCG00000002706
ENSG00000065457
Adenosine deaminase, tRNA specific 1
Low tissue specificity
Detected in all
ADAT2
ENSSSCG00000039598
ENSG00000189007
Adenosine deaminase, tRNA specific 2
Low tissue specificity
Detected in all
ADAT3
ENSSSCG00000038810
ENSG00000213638
Adenosine deaminase, tRNA specific 3
Low tissue specificity
Detected in all
ADCK1
ENSSSCG00000002408
ENSG00000063761
AarF domain containing kinase 1
Low tissue specificity
Detected in all
ADCK2
ENSSSCG00000016496
ENSG00000133597
AarF domain containing kinase 2
Low tissue specificity
Detected in all
ADCK5
ENSSSCG00000005907
ENSG00000173137
AarF domain containing kinase 5
Tissue enhanced
Detected in all
epididymis:
47.5
ADCY2
ENSSSCG00000017101
ENSG00000078295
Adenylate cyclase 2
Tissue enhanced
Detected in many
brain:
39.7
skeletal muscle:
38.1
ADCY3
ENSSSCG00000008578
ENSG00000138031
Adenylate cyclase 3
Tissue enhanced
Detected in all
ovary:
38.6
ADCY4
ENSSSCG00000001988
ENSG00000129467
Adenylate cyclase 4
Tissue enhanced
Detected in many
lymphoid tissue:
44.9
ADCY5
ENSSSCG00000027952
ENSG00000173175
Adenylate cyclase 5
Tissue enriched
Detected in many
brain:
73.5
ADCY6
ENSSSCG00000000175
ENSG00000174233
Adenylate cyclase 6
Tissue enhanced
Detected in all
heart:
76.9
ADCY7
ENSSSCG00000039408
ENSG00000121281
Adenylate cyclase 7
Tissue enhanced
Detected in many
lymphoid tissue:
48.3
ADCY8
ENSSSCG00000031717
ENSG00000155897
Adenylate cyclase 8
Tissue enhanced
Detected in all
upper respiratory system:
30.9
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