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Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Keyword
Chromosome
1
2
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8
9
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Lymphoid tissue
Male glands
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Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15765 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000040958
ENSG00000213281
Low tissue specificity
Detected in all
na
ENSSSCG00000040960
Tissue enhanced
Detected in many
kidney:
10.3
na
ENSSSCG00000040965
Tissue enhanced
Detected in many
choroid plexus:
9.7
lens:
16.2
na
ENSSSCG00000040968
ENSG00000141994
Tissue enhanced
Detected in all
testis:
39.3
na
ENSSSCG00000040974
Low tissue specificity
Detected in all
na
ENSSSCG00000040979
Low tissue specificity
Detected in many
na
ENSSSCG00000040982
Tissue enhanced
Detected in some
brain:
15.0
choroid plexus:
10.4
retina:
11.8
na
ENSSSCG00000040984
ENSG00000137168
Low tissue specificity
Detected in all
na
ENSSSCG00000040988
Tissue enhanced
Detected in many
brain:
46.8
male glands:
71.3
vagus nerve:
78.9
NAA10
ENSSSCG00000012791
ENSG00000102030
N(alpha)-acetyltransferase 10, NatA catalytic subunit
Low tissue specificity
Detected in all
NAA15
ENSSSCG00000009061
ENSG00000164134
N(alpha)-acetyltransferase 15, NatA auxiliary subunit
Low tissue specificity
Detected in all
NAA16
ENSSSCG00000009435
ENSG00000172766
N(alpha)-acetyltransferase 16, NatA auxiliary subunit
Low tissue specificity
Detected in all
NAA20
ENSSSCG00000028132
ENSG00000173418
N(alpha)-acetyltransferase 20, NatB catalytic subunit
Tissue enhanced
Detected in all
lens:
111.9
NAA25
ENSSSCG00000009887
ENSG00000111300
N(alpha)-acetyltransferase 25, NatB auxiliary subunit
Low tissue specificity
Detected in all
NAA30
ENSSSCG00000031332
ENSG00000139977
N(alpha)-acetyltransferase 30, NatC catalytic subunit
Low tissue specificity
Detected in all
NAA35
ENSSSCG00000010956
ENSG00000135040
N(alpha)-acetyltransferase 35, NatC auxiliary subunit
Low tissue specificity
Detected in all
NAA38
ENSSSCG00000017971
ENSG00000183011
N(alpha)-acetyltransferase 38, NatC auxiliary subunit
Low tissue specificity
Detected in all
NAA40
ENSSSCG00000022687
ENSG00000110583
N(alpha)-acetyltransferase 40, NatD catalytic subunit
Low tissue specificity
Detected in all
NAA50
ENSSSCG00000011917
ENSG00000121579
N-alpha-acetyltransferase 50
Low tissue specificity
Detected in all
NAA60
ENSSSCG00000021065
ENSG00000122390
N(alpha)-acetyltransferase 60, NatF catalytic subunit
Low tissue specificity
Detected in all
NAAA
ENSSSCG00000008973
ENSG00000138744
N-acylethanolamine acid amidase
Tissue enhanced
Detected in all
kidney:
54.4
NAALAD2
ENSSSCG00000014933
ENSG00000077616
N-acetylated alpha-linked acidic dipeptidase 2
Low tissue specificity
Detected in all
NAALADL1
ENSSSCG00000013010
ENSG00000168060
N-acetylated alpha-linked acidic dipeptidase like 1
Tissue enriched
Detected in all
small intestine:
77.2
NAB1
ENSSSCG00000029547
ENSG00000138386
NGFI-A binding protein 1
Low tissue specificity
Detected in all
NAB2
ENSSSCG00000000411
ENSG00000166886
NGFI-A binding protein 2
Low tissue specificity
Detected in many
NABP1
ENSSSCG00000016062
ENSG00000173559
SOSS complex subunit B2
Low tissue specificity
Detected in all
NABP2
ENSSSCG00000000384
ENSG00000139579
Nucleic acid binding protein 2
Low tissue specificity
Detected in all
NACAD
ENSSSCG00000016733
ENSG00000136274
NAC alpha domain containing
Tissue enriched
Detected in many
brain:
42.4
NACC1
ENSSSCG00000013751
ENSG00000160877
Nucleus accumbens associated 1
Low tissue specificity
Detected in all
NACC2
ENSSSCG00000040967
ENSG00000148411
NACC family member 2
Tissue enhanced
Detected in all
lens:
47.1
NADK
ENSSSCG00000038967
ENSG00000008130
NAD kinase
Tissue enhanced
Detected in all
stomach:
63.1
NADK2
ENSSSCG00000016836
ENSG00000152620
NAD kinase 2, mitochondrial
Tissue enhanced
Detected in all
liver:
61.6
NADSYN1
ENSSSCG00000012859
ENSG00000172890
NAD synthetase 1
Low tissue specificity
Detected in all
NAE1
ENSSSCG00000035639
ENSG00000159593
NEDD8 activating enzyme E1 subunit 1
Low tissue specificity
Detected in all
NAF1
ENSSSCG00000008887
ENSG00000145414
Nuclear assembly factor 1 ribonucleoprotein
Low tissue specificity
Detected in all
NAGA
ENSSSCG00000000050
ENSG00000198951
Alpha-N-acetylgalactosaminidase precursor
Low tissue specificity
Detected in all
NAGK
ENSSSCG00000008316
ENSG00000124357
N-acetylglucosamine kinase
Tissue enriched
Detected in all
lens:
122.9
NAGLU
ENSSSCG00000035147
ENSG00000108784
N-acetyl-alpha-glucosaminidase
Low tissue specificity
Detected in all
NAGPA
ENSSSCG00000007925
ENSG00000103174
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase precursor
Low tissue specificity
Detected in all
NAIF1
ENSSSCG00000005630
ENSG00000171169
Nuclear apoptosis inducing factor 1
Low tissue specificity
Detected in all
NALCN
ENSSSCG00000038949
ENSG00000102452
Sodium leak channel, non-selective
Tissue enhanced
Detected in many
brain:
15.2
pineal gland:
14.9
NAMPT
ENSSSCG00000015435
ENSG00000105835
Nicotinamide phosphoribosyltransferase
Tissue enriched
Detected in all
lens:
169.3
NANOS1
ENSSSCG00000040025
ENSG00000188613
Nanos C2HC-type zinc finger 1
Tissue enhanced
Detected in many
male glands:
21.9
synovial tissue:
16.4
NANP
ENSSSCG00000039380
ENSG00000170191
N-acetylneuraminic acid phosphatase
Low tissue specificity
Detected in all
NANS
ENSSSCG00000005373
ENSG00000095380
Sialic acid synthase
Low tissue specificity
Detected in all
NAP1L3
ENSSSCG00000012504
ENSG00000186310
Nucleosome assembly protein 1 like 3
Tissue enhanced
Detected in many
brain:
52.8
NAP1L4
ENSSSCG00000012856
ENSG00000205531
Nucleosome assembly protein 1-like 4
Tissue enriched
Detected in all
lens:
155.7
NAPA
ENSSSCG00000003120
ENSG00000105402
Alpha-soluble NSF attachment protein
Low tissue specificity
Detected in all
NAPB
ENSSSCG00000031219
ENSG00000125814
NSF attachment protein beta
Group enriched
Detected in many
brain:
39.5
pineal gland:
19.0
retina:
14.7
NAPEPLD
ENSSSCG00000022903
ENSG00000161048
N-acyl phosphatidylethanolamine phospholipase D
Tissue enhanced
Detected in all
thyroid gland:
74.2
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