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Gene name
Human disease related genes
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UMAP gene cluster
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Keyword
Chromosome
1
2
3
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5
6
7
8
9
10
11
12
13
14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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16395 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
AKAP10
ENSSSCG00000024030
ENSG00000108599
A-kinase anchor protein 10, mitochondrial
Low tissue specificity
Detected in all
AKAP12
ENSSSCG00000031733
ENSG00000131016
A-kinase anchoring protein 12
Low tissue specificity
Detected in many
AKAP17A
ENSSSCG00000032986
ENSG00000197976
A-kinase anchoring protein 17A
Tissue enhanced
Detected in all
stomach:
69.3
AKAP3
ENSSSCG00000000720
ENSG00000111254
A-kinase anchor protein 3
Tissue enriched
Detected in many
testis:
78.4
AKAP5
ENSSSCG00000002268
ENSG00000179841
A-kinase anchoring protein 5
Tissue enriched
Detected in many
brain:
44.5
AKAP6
ENSSSCG00000024517
ENSG00000151320
A-kinase anchoring protein 6
Tissue enhanced
Detected in many
brain:
31.0
heart:
30.2
skeletal muscle:
30.0
AKAP7
ENSSSCG00000036790
ENSG00000118507
A-kinase anchoring protein 7
Low tissue specificity
Detected in all
AKAP8
ENSSSCG00000013837
ENSG00000105127
A-kinase anchoring protein 8
Low tissue specificity
Detected in all
AKAP8L
ENSSSCG00000013838
ENSG00000011243
A-kinase anchoring protein 8 like
Low tissue specificity
Detected in all
AKAP9
ENSSSCG00000015310
ENSG00000127914
A-kinase anchor protein 9
Low tissue specificity
Detected in all
AKIP1
ENSSSCG00000033335
ENSG00000166452
A-kinase interacting protein 1
Low tissue specificity
Detected in all
AKIRIN1
ENSSSCG00000003652
ENSG00000174574
Akirin-1
Low tissue specificity
Detected in all
AKIRIN2
ENSSSCG00000004307
ENSG00000135334
Akirin-2
Low tissue specificity
Detected in all
AKNA
ENSSSCG00000023894
ENSG00000106948
AT-hook transcription factor
Tissue enhanced
Detected in many
lymphoid tissue:
50.5
stomach:
46.5
AKR1A1
ENSSSCG00000029256
ENSG00000117448
Alcohol dehydrogenase
Low tissue specificity
Detected in all
AKR1B1
ENSSSCG00000040608
ENSG00000085662
Aldose reductase
Tissue enhanced
Detected in all
kidney:
55.9
lens:
113.2
male glands:
56.6
AKR1D1
ENSSSCG00000016519
ENSG00000122787
Aldo-keto reductase family 1 member D1
Tissue enriched
Detected in some
liver:
134.2
AKR1E2
ENSSSCG00000036941
ENSG00000165568
1,5-anhydro-D-fructose reductase
Tissue enriched
Detected in many
kidney:
93.3
AKR7A2
ENSSSCG00000003491
ENSG00000053371,ENSG00000162482
Aflatoxin B1 aldehyde reductase member 2
Tissue enhanced
Detected in all
kidney:
78.9
liver:
51.0
AKT1S1
ENSSSCG00000003194
ENSG00000204673
AKT1 substrate 1
Low tissue specificity
Detected in all
AKT2
ENSSSCG00000002989
ENSG00000105221
RAC-beta serine/threonine-protein kinase
Tissue enhanced
Detected in all
adipose tissue:
96.5
AKT3
ENSSSCG00000010872
ENSG00000117020
RAC-gamma serine/threonine-protein kinase
Low tissue specificity
Detected in all
AKTIP
ENSSSCG00000026181
ENSG00000166971
AKT-interacting protein
Low tissue specificity
Detected in all
ALAD
ENSSSCG00000032787
ENSG00000148218
Aminolevulinate dehydratase
Tissue enhanced
Detected in all
liver:
98.4
ALAS1
ENSSSCG00000011437
ENSG00000023330
5'-aminolevulinate synthase 1
Tissue enhanced
Detected in all
adrenal gland:
119.0
ALCAM
ENSSSCG00000011946
ENSG00000170017
Activated leukocyte cell adhesion molecule
Low tissue specificity
Detected in many
ALDH16A1
ENSSSCG00000003168
ENSG00000161618
Aldehyde dehydrogenase 16 family member A1
Low tissue specificity
Detected in all
ALDH18A1
ENSSSCG00000010495
ENSG00000059573
Aldehyde dehydrogenase 18 family member A1
Tissue enhanced
Detected in many
male glands:
70.8
ALDH1A1
ENSSSCG00000028996
ENSG00000165092
Aldehyde dehydrogenase 1 family member A1
Tissue enhanced
Detected in many
lens:
147.3
liver:
94.7
ALDH1A2
ENSSSCG00000025578
ENSG00000128918
Aldehyde dehydrogenase 1 family member A2
Tissue enhanced
Detected in many
adipose tissue:
44.6
testis:
38.1
ALDH1A3
ENSSSCG00000004822
ENSG00000184254
Aldehyde dehydrogenase 1 family member A3
Tissue enhanced
Detected in many
mesothelial tissue:
42.7
ALDH1B1
ENSSSCG00000005361
ENSG00000137124
Aldehyde dehydrogenase 1 family member B1
Tissue enhanced
Detected in many
kidney:
70.6
ALDH1L1
ENSSSCG00000030626
ENSG00000144908
Cytosolic 10-formyltetrahydrofolate dehydrogenase
Group enriched
Detected in many
kidney:
42.9
liver:
148.3
ALDH1L2
ENSSSCG00000000839
ENSG00000136010
Aldehyde dehydrogenase 1 family member L2
Low tissue specificity
Detected in all
ALDH2
ENSSSCG00000009889
ENSG00000111275
Aldehyde dehydrogenase, mitochondrial
Tissue enhanced
Detected in all
liver:
117.1
ALDH3A2
ENSSSCG00000018041
ENSG00000072210
Aldehyde dehydrogenase 3 family member A2
Low tissue specificity
Detected in all
ALDH3B1
ENSSSCG00000028501
ENSG00000006534
Aldehyde dehydrogenase family 3 member B1
Tissue enhanced
Detected in many
lung:
26.5
ALDH3B2
ENSSSCG00000026349
ENSG00000132746
Aldehyde dehydrogenase 3 family member B2
Tissue enhanced
Detected in many
mouth:
13.0
skin:
48.0
ALDH4A1
ENSSSCG00000024752
ENSG00000159423
Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
Tissue enhanced
Detected in all
kidney:
61.1
liver:
78.9
ALDH5A1
ENSSSCG00000001090
ENSG00000112294
Succinate-semialdehyde dehydrogenase, mitochondrial
Tissue enhanced
Detected in all
liver:
38.4
ALDH6A1
ENSSSCG00000002357
ENSG00000119711
Aldehyde dehydrogenase 6 family member A1
Tissue enhanced
Detected in all
kidney:
85.2
ALDH7A1
ENSSSCG00000014247
ENSG00000164904
Aldehyde dehydrogenase 7 family member A1
Tissue enhanced
Detected in all
liver:
72.6
ALDH9A1
ENSSSCG00000006324
ENSG00000143149
Aldehyde dehydrogenase 9 family member A1
Tissue enhanced
Detected in all
liver:
69.0
ALDOC
ENSSSCG00000017759
ENSG00000109107
Fructose-bisphosphate aldolase C
Tissue enhanced
Detected in many
adipose tissue:
85.9
brain:
145.7
pineal gland:
49.1
retina:
64.5
ALG11
ENSSSCG00000009381
ENSG00000253710
ALG11, alpha-1,2-mannosyltransferase
Low tissue specificity
Detected in all
ALG12
ENSSSCG00000000980
ENSG00000182858
ALG12, alpha-1,6-mannosyltransferase
Low tissue specificity
Detected in all
ALG13
ENSSSCG00000012586
ENSG00000101901
ALG13, UDP-N-acetylglucosaminyltransferase subunit
Low tissue specificity
Detected in all
ALG14
ENSSSCG00000006885
ENSG00000172339
ALG14, UDP-N-acetylglucosaminyltransferase subunit
Low tissue specificity
Detected in all
ALG2
ENSSSCG00000005383
ENSG00000119523
Alpha-1,3/1,6-mannosyltransferase ALG2
Tissue enriched
Detected in all
male glands:
68.2
ALG3
ENSSSCG00000021319
ENSG00000214160
ALG3, alpha-1,3- mannosyltransferase
Low tissue specificity
Detected in all
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