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Human disease related genes
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UMAP gene cluster
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Keyword
Chromosome
1
2
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6
7
8
9
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11
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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16617 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
KLRK1
ENSSSCG00000040465
ENSG00000213809
NKG2-D type II integral membrane protein
Tissue enhanced
Detected in many
lymphoid tissue:
27.6
KMO
ENSSSCG00000025686
ENSG00000117009
Kynurenine 3-monooxygenase
Tissue enhanced
Detected in many
kidney:
24.8
liver:
62.8
KMT2A
ENSSSCG00000023324
ENSG00000118058
Lysine methyltransferase 2A
Low tissue specificity
Detected in all
KMT2C
ENSSSCG00000020663
ENSG00000055609
Lysine methyltransferase 2C
Low tissue specificity
Detected in all
KMT2E
ENSSSCG00000029082
ENSG00000005483
Lysine methyltransferase 2E
Low tissue specificity
Detected in all
KMT5A
ENSSSCG00000009777
ENSG00000183955
Lysine methyltransferase 5A
Low tissue specificity
Detected in all
KMT5B
ENSSSCG00000031459
ENSG00000110066
Lysine methyltransferase 5B
Low tissue specificity
Detected in all
KMT5C
ENSSSCG00000035829
ENSG00000133247
Lysine methyltransferase 5C
Low tissue specificity
Detected in all
KNCN
ENSSSCG00000034300
ENSG00000162456
Kinocilin
Tissue enhanced
Detected in many
choroid plexus:
9.4
epididymis:
6.6
KNG1
ENSSSCG00000011802
ENSG00000113889
Kininogen 1
Tissue enriched
Detected in many
liver:
179.2
KNSTRN
ENSSSCG00000004775
ENSG00000128944
Kinetochore localized astrin/SPAG5 binding protein
Tissue enhanced
Detected in all
testis:
48.9
KNTC1
ENSSSCG00000039546
ENSG00000184445
Kinetochore associated 1
Low tissue specificity
Detected in all
KPNA1
ENSSSCG00000028475
ENSG00000114030
Importin subunit alpha-5
Tissue enhanced
Detected in all
lens:
81.4
KPNA2
ENSSSCG00000029005
ENSG00000182481
Importin subunit alpha-1
Tissue enriched
Detected in many
testis:
108.3
KPNA3
ENSSSCG00000024125
ENSG00000102753
Importin subunit alpha-4
Tissue enhanced
Detected in all
lens:
95.6
KPNA4
ENSSSCG00000031077
ENSG00000186432
Karyopherin subunit alpha 4
Tissue enhanced
Detected in all
lens:
105.1
KPNA5
ENSSSCG00000004262
ENSG00000196911
Karyopherin subunit alpha 5
Low tissue specificity
Detected in all
KPNA6
ENSSSCG00000034017
ENSG00000025800
Karyopherin subunit alpha 6
Tissue enhanced
Detected in all
cornea:
64.4
KPNB1
ENSSSCG00000017514
ENSG00000108424
Karyopherin subunit beta 1
Tissue enhanced
Detected in all
lens:
100.8
KPTN
ENSSSCG00000003121
ENSG00000118162
Kaptin, actin binding protein
Low tissue specificity
Detected in all
KRAS
ENSSSCG00000026969
ENSG00000133703
KRAS proto-oncogene, GTPase
Low tissue specificity
Detected in all
KRBA1
ENSSSCG00000034873
ENSG00000133619
KRAB-A domain containing 1
Tissue enhanced
Detected in many
male glands:
16.4
KRBA2
ENSSSCG00000021434
ENSG00000184619
KRAB-A domain containing 2
Tissue enhanced
Detected in many
male glands:
22.0
KREMEN1
ENSSSCG00000009972
ENSG00000183762
Kringle containing transmembrane protein 1
Low tissue specificity
Detected in all
KREMEN2
ENSSSCG00000035052
ENSG00000131650
Kringle containing transmembrane protein 2
Group enriched
Detected in some
epididymis:
7.5
lymphoid tissue:
15.9
skin:
13.0
upper respiratory system:
4.0
KRI1
ENSSSCG00000013644
ENSG00000129347
KRI1 homolog
Low tissue specificity
Detected in all
KRIT1
ENSSSCG00000015313
ENSG00000001631
KRIT1, ankyrin repeat containing
Low tissue specificity
Detected in all
KRR1
ENSSSCG00000033524
ENSG00000111615
KRR1, small subunit processome component homolog
Low tissue specificity
Detected in all
KRT10
ENSSSCG00000028522
ENSG00000186395
Keratin 10
Group enriched
Detected in many
mouth:
93.8
skin:
212.0
KRT13
ENSSSCG00000017445
ENSG00000171401
Keratin 13
Tissue enriched
Detected in some
mouth:
692.3
KRT14
ENSSSCG00000017448
ENSG00000186847
Keratin 14
Tissue enhanced
Detected in many
large intestine:
131.5
mouth:
166.7
skin:
199.4
KRT15
ENSSSCG00000017444
ENSG00000171346
Keratin 15
Tissue enhanced
Detected in some
esophagus:
57.2
mouth:
174.6
skin:
65.5
upper respiratory system:
44.1
KRT18
ENSSSCG00000000253
ENSG00000111057
Keratin 18
Tissue enhanced
Detected in many
gallbladder:
41.8
male glands:
48.4
salivary gland:
54.6
KRT2
ENSSSCG00000037806
ENSG00000172867
Keratin, type II cytoskeletal 2 epidermal
Tissue enriched
Detected in some
skin:
38.6
KRT20
ENSSSCG00000017459
ENSG00000171431
Keratin 20
Tissue enhanced
Detected in many
gallbladder:
36.3
large intestine:
157.2
small intestine:
66.8
KRT23
ENSSSCG00000024067
ENSG00000108244
Keratin 23
Group enriched
Detected in many
male glands:
46.0
salivary gland:
55.0
upper respiratory system:
26.1
KRT24
ENSSSCG00000017465
ENSG00000167916
Keratin 24
Tissue enriched
Detected in many
mouth:
79.2
KRT4
ENSSSCG00000024610
ENSG00000170477
Keratin 4
Group enriched
Detected in some
esophagus:
91.9
mouth:
354.0
KRT40
ENSSSCG00000036987
ENSG00000204889
Keratin 40
Tissue enhanced
Detected in many
skin:
31.6
KRT5
ENSSSCG00000000248
ENSG00000186081
Keratin 5
Group enriched
Detected in many
cornea:
115.8
mouth:
325.7
skin:
162.7
KRT7
ENSSSCG00000038966
ENSG00000135480
Keratin 7
Tissue enhanced
Detected in many
breast:
50.7
gallbladder:
38.2
salivary gland:
40.2
KRT8
ENSSSCG00000000252
ENSG00000170421
Keratin, type II cytoskeletal 8
Tissue enhanced
Detected in many
gallbladder:
64.3
large intestine:
167.1
stomach:
63.3
KRT80
ENSSSCG00000040636
ENSG00000167767
Keratin 80
Tissue enhanced
Detected in all
salivary gland:
44.8
KRTAP8-1
ENSSSCG00000021087
ENSG00000183640
Keratin associated protein 8-1
Tissue enriched
Detected in some
skin:
22.6
KRTCAP2
ENSSSCG00000006527
ENSG00000163463
Keratinocyte-associated protein 2
Low tissue specificity
Detected in all
KRTCAP3
ENSSSCG00000040062
ENSG00000157992
Keratinocyte associated protein 3
Low tissue specificity
Detected in all
KRTDAP
ENSSSCG00000002882
ENSG00000188508
Keratinocyte differentiation associated protein
Group enriched
Detected in some
mouth:
24.6
skin:
52.3
KSR1
ENSSSCG00000017753
ENSG00000141068
Kinase suppressor of ras 1
Low tissue specificity
Detected in all
KSR2
ENSSSCG00000009855
ENSG00000171435
Kinase suppressor of ras 2
Tissue enhanced
Detected in some
brain:
19.3
pineal gland:
12.2
pituitary gland:
21.3
retina:
9.7
KTN1
ENSSSCG00000005060
ENSG00000126777
Kinectin
Low tissue specificity
Detected in all
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