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Human disease related genes
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Chromosome
1
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Stomach 1
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Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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16104 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
GPR161
ENSSSCG00000006302
ENSG00000143147
G protein-coupled receptor 161
Tissue enriched
Detected in many
testis:
57.7
GPR17
ENSSSCG00000040850
ENSG00000144230
G protein-coupled receptor 17
Tissue enhanced
Detected in all
brain:
22.1
GPR171
ENSSSCG00000036844
ENSG00000174946
G protein-coupled receptor 171
Tissue enhanced
Detected in all
choroid plexus:
28.1
GPR173
ENSSSCG00000024958
ENSG00000184194
G protein-coupled receptor 173
Low tissue specificity
Detected in many
GPR174
ENSSSCG00000021734
ENSG00000147138
G protein-coupled receptor 174
Tissue enhanced
Detected in many
lymphoid tissue:
34.9
GPR176
ENSSSCG00000004787
ENSG00000166073
G protein-coupled receptor 176
Low tissue specificity
Detected in all
GPR18
ENSSSCG00000031999
ENSG00000125245
G protein-coupled receptor 18
Tissue enhanced
Detected in many
lymphoid tissue:
34.8
GPR180
ENSSSCG00000009492
ENSG00000152749
G protein-coupled receptor 180
Low tissue specificity
Detected in all
GPR182
ENSSSCG00000037701
ENSG00000166856
G protein-coupled receptor 182
Tissue enhanced
Detected in many
liver:
15.5
lymphoid tissue:
19.2
GPR183
ENSSSCG00000009517
ENSG00000169508
G protein-coupled receptor 183
Tissue enhanced
Detected in all
lymphoid tissue:
43.2
GPR19
ENSSSCG00000040400
ENSG00000183150
G protein-coupled receptor 19
Tissue enhanced
Detected in many
brain:
11.6
lymphoid tissue:
16.7
testis:
14.5
GPR22
ENSSSCG00000015442
ENSG00000172209
G protein-coupled receptor 22
Tissue enriched
Detected in many
brain:
39.3
GPR25
ENSSSCG00000037641
ENSG00000170128
G protein-coupled receptor 25
Tissue enhanced
Detected in some
lung:
12.1
stomach:
29.2
upper respiratory system:
11.9
GPR27
ENSSSCG00000036580
ENSG00000170837
G protein-coupled receptor 27
Low tissue specificity
Detected in many
GPR33
ENSSSCG00000025131
ENSG00000214943
Probable G-protein coupled receptor 33
Low tissue specificity
Detected in many
GPR34
ENSSSCG00000022309
ENSG00000171659
G protein-coupled receptor 34
Tissue enhanced
Detected in many
brain:
20.1
GPR35
ENSSSCG00000040095
ENSG00000178623
G protein-coupled receptor 35
Tissue enhanced
Detected in many
lymphoid tissue:
13.5
stomach:
19.9
GPR39
ENSSSCG00000015707
ENSG00000183840
G protein-coupled receptor 39
Tissue enhanced
Detected in many
liver:
28.1
stomach:
25.8
GPR4
ENSSSCG00000037184
ENSG00000177464
G-protein coupled receptor 4
Tissue enhanced
Detected in many
mesothelial tissue:
38.0
GPR52
ENSSSCG00000040789
ENSG00000203737
G protein-coupled receptor 52
Tissue enhanced
Detected in many
brain:
24.7
heart:
39.7
GPR55
ENSSSCG00000035592
ENSG00000135898
G protein-coupled receptor 55
Tissue enhanced
Detected in some
large intestine:
7.5
lymphoid tissue:
9.0
small intestine:
6.9
stomach:
11.5
testis:
5.4
GPR63
ENSSSCG00000035240
ENSG00000112218
G protein-coupled receptor 63
Tissue enhanced
Detected in many
brain:
18.9
lens:
15.6
GPR65
ENSSSCG00000021146
ENSG00000140030
G protein-coupled receptor 65
Tissue enhanced
Detected in many
lymphoid tissue:
18.7
GPR68
ENSSSCG00000034114
ENSG00000119714
G protein-coupled receptor 68
Tissue enhanced
Detected in many
ovary:
18.4
GPR75
ENSSSCG00000008413
ENSG00000119737
Probable G-protein coupled receptor 75
Tissue enriched
Detected in many
brain:
56.9
GPR82
ENSSSCG00000012254
ENSG00000171657
Probable G-protein coupled receptor 82
Tissue enriched
Detected in many
lymphoid tissue:
45.6
GPR83
ENSSSCG00000022490
ENSG00000123901
Probable G-protein coupled receptor 83 precursor
Tissue enhanced
Detected in all
brain:
16.8
breast:
14.4
GPR84
ENSSSCG00000000291
ENSG00000139572
G-protein coupled receptor 84
Tissue enhanced
Detected in many
dura mater:
11.2
lymphoid tissue:
9.0
upper respiratory system:
10.1
GPR87
ENSSSCG00000032365
ENSG00000138271
G protein-coupled receptor 87
Tissue enhanced
Detected in all
choroid plexus:
30.0
GPRC5A
ENSSSCG00000029592
ENSG00000013588
G protein-coupled receptor class C group 5 member A
Tissue enhanced
Detected in many
cartilage:
35.0
large intestine:
51.4
lung:
52.1
synovial tissue:
47.7
GPRC5B
ENSSSCG00000007864
ENSG00000167191
G protein-coupled receptor class C group 5 member B
Tissue enhanced
Detected in all
brain:
75.1
lens:
84.2
ovary:
63.1
GPRC5C
ENSSSCG00000040989
ENSG00000170412
G protein-coupled receptor class C group 5 member C
Tissue enhanced
Detected in all
stomach:
56.2
GPRC5D
ENSSSCG00000029545
ENSG00000111291
G protein-coupled receptor class C group 5 member D
Tissue enriched
Detected in many
skin:
68.9
GPRC6A
ENSSSCG00000036207
ENSG00000173612
G protein-coupled receptor class C group 6 member A
Low tissue specificity
Detected in all
GPRIN1
ENSSSCG00000014054
ENSG00000169258
G protein regulated inducer of neurite outgrowth 1
Group enriched
Detected in many
brain:
36.5
pituitary gland:
9.1
GPRIN3
ENSSSCG00000039821
ENSG00000185477
GPRIN family member 3
Tissue enhanced
Detected in many
brain:
34.2
lymphoid tissue:
35.7
pineal gland:
34.6
GPRL15
ENSSSCG00000024634
ENSG00000188373
Protein GPR15L
Tissue enhanced
Detected in some
large intestine:
118.4
lymphoid tissue:
26.5
salivary gland:
27.7
upper respiratory system:
37.9
GPS1
ENSSSCG00000033689
ENSG00000169727
G protein pathway suppressor 1
Low tissue specificity
Detected in all
GPSM1
ENSSSCG00000039487
ENSG00000160360
G protein signaling modulator 1
Tissue enhanced
Detected in all
brain:
35.1
GPSM2
ENSSSCG00000021440
ENSG00000121957
G protein signaling modulator 2
Tissue enhanced
Detected in all
brain:
32.4
GPSM3
ENSSSCG00000001439
ENSG00000213654
G-protein-signaling modulator 3
Tissue enhanced
Detected in many
lymphoid tissue:
77.1
GPT2
ENSSSCG00000002847
ENSG00000166123
Glutamic--pyruvic transaminase 2
Tissue enhanced
Detected in many
brain:
43.4
kidney:
59.2
liver:
39.4
GPX1
ENSSSCG00000033727
Glutathione peroxidase 1
Low tissue specificity
Detected in all
GPX2
ENSSSCG00000002279
ENSG00000176153
Glutathione peroxidase 2
Group enriched
Detected in some
large intestine:
226.7
upper respiratory system:
96.9
GPX3
ENSSSCG00000036438
ENSG00000211445
Glutathione peroxidase 3 precursor
Group enriched
Detected in many
kidney:
521.1
ovary:
496.9
GPX4
ENSSSCG00000024052
ENSG00000167468
Phospholipid hydroperoxide glutathione peroxidase, mitochondrial
Tissue enhanced
Detected in all
lens:
91.2
testis:
112.1
GPX5
ENSSSCG00000001214
ENSG00000224586
Epididymal secretory glutathione peroxidase
Tissue enriched
Detected in many
epididymis:
80.6
GPX7
ENSSSCG00000038094
ENSG00000116157
Glutathione peroxidase 7
Low tissue specificity
Detected in many
GPX8
ENSSSCG00000021973
ENSG00000164294
Glutathione peroxidase 8 (putative)
Tissue enhanced
Detected in many
male glands:
42.8
ovary:
33.4
GRAMD1A
ENSSSCG00000002879
ENSG00000089351
GRAM domain containing 1A
Low tissue specificity
Detected in all
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