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Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Chromosome
1
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Stomach 1
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Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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14921 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
KDM4B
ENSSSCG00000024570
ENSG00000127663
Lysine demethylase 4B
Low tissue specificity
Detected in all
KDM4C
ENSSSCG00000005198
ENSG00000107077
Lysine demethylase 4C
Tissue enhanced
Detected in all
lymphoid tissue:
47.4
KDM5A
ENSSSCG00000029464
ENSG00000073614
Lysine demethylase 5A
Low tissue specificity
Detected in all
KDM5B
ENSSSCG00000010928
ENSG00000117139
Lysine demethylase 5B
Low tissue specificity
Detected in all
KDM5C
ENSSSCG00000012322
ENSG00000126012
Lysine-specific demethylase 5C
Low tissue specificity
Detected in all
KDM6A
ENSSSCG00000012262
ENSG00000147050
Lysine demethylase 6A
Low tissue specificity
Detected in all
KDM6B
ENSSSCG00000017962
ENSG00000132510
Lysine demethylase 6B
Low tissue specificity
Detected in all
KDM7A
ENSSSCG00000016501
ENSG00000006459
Lysine demethylase 7A
Low tissue specificity
Detected in all
KDM8
ENSSSCG00000007818
ENSG00000155666
Lysine demethylase 8
Low tissue specificity
Detected in all
KDR
ENSSSCG00000008844
ENSG00000128052
Kinase insert domain receptor
Low tissue specificity
Detected in many
KDSR
ENSSSCG00000025744
ENSG00000119537
3-ketodihydrosphingosine reductase
Low tissue specificity
Detected in all
KEAP1
ENSSSCG00000023667
ENSG00000079999
Kelch-like ECH-associated protein 1
Low tissue specificity
Detected in all
KEL
ENSSSCG00000016472
ENSG00000197993
Kell blood group, metallo-endopeptidase
Tissue enhanced
Detected in many
liver:
18.0
upper respiratory system:
20.6
KHDC4
ENSSSCG00000006504
ENSG00000132680
KH domain containing 4, pre-mRNA splicing factor
Tissue enhanced
Detected in all
lymphoid tissue:
75.4
KHDRBS1
ENSSSCG00000023122
ENSG00000121774
KH domain-containing, RNA-binding, signal transduction-associated protein 1
Low tissue specificity
Detected in all
KHDRBS3
ENSSSCG00000005941
ENSG00000131773
KH RNA binding domain containing, signal transduction associated 3
Group enriched
Detected in many
brain:
38.0
testis:
45.1
KHK
ENSSSCG00000008556
ENSG00000138030
Ketohexokinase
Tissue enhanced
Detected in all
liver:
63.4
small intestine:
45.8
KHNYN
ENSSSCG00000001984
ENSG00000100441
KH and NYN domain containing
Tissue enhanced
Detected in all
stomach:
51.1
KHSRP
ENSSSCG00000013538
ENSG00000088247
KH-type splicing regulatory protein
Low tissue specificity
Detected in all
KIAA0040
ENSSSCG00000040719
ENSG00000235750
KIAA0040
Tissue enhanced
Detected in many
cartilage:
42.1
kidney:
33.7
lymphoid tissue:
35.5
KIAA0100
ENSSSCG00000017764
ENSG00000007202
KIAA0100
Low tissue specificity
Detected in all
KIAA0141
ENSSSCG00000014396
ENSG00000081791
KIAA0141
Low tissue specificity
Detected in all
KIAA0232
ENSSSCG00000008713
ENSG00000170871
KIAA0232
Low tissue specificity
Detected in all
KIAA0319
ENSSSCG00000001091
ENSG00000137261
KIAA0319
Tissue enhanced
Detected in some
brain:
19.2
choroid plexus:
9.9
pituitary gland:
11.9
KIAA0319L
ENSSSCG00000037121
ENSG00000142687
KIAA0319 like
Low tissue specificity
Detected in all
KIAA0355
ENSSSCG00000002872
ENSG00000166398
KIAA0355
Low tissue specificity
Detected in all
KIAA0408
ENSSSCG00000004215
ENSG00000189367
KIAA0408
Tissue enhanced
Detected in many
brain:
27.5
skeletal muscle:
37.5
smooth muscle:
24.3
KIAA0513
ENSSSCG00000002666
ENSG00000135709
KIAA0513
Tissue enhanced
Detected in all
stomach:
69.5
KIAA0556
ENSSSCG00000007814
ENSG00000047578
KIAA0556
Tissue enhanced
Detected in all
retina:
40.2
KIAA0586
ENSSSCG00000005076
ENSG00000100578
KIAA0586
Low tissue specificity
Detected in all
KIAA0753
ENSSSCG00000017890
ENSG00000198920
KIAA0753
Low tissue specificity
Detected in all
KIAA0895
ENSSSCG00000016659
ENSG00000164542
KIAA0895
Tissue enhanced
Detected in many
testis:
31.2
KIAA0895L
ENSSSCG00000032443
ENSG00000196123
KIAA0895 like
Low tissue specificity
Detected in all
KIAA0930
ENSSSCG00000000018
ENSG00000100364
KIAA0930
Low tissue specificity
Detected in all
KIAA1024
ENSSSCG00000001775
ENSG00000169330
KIAA1024
Tissue enriched
Detected in all
lens:
56.1
KIAA1109
ENSSSCG00000009090
ENSG00000138688
KIAA1109
Low tissue specificity
Detected in all
KIAA1143
ENSSSCG00000032344
ENSG00000163807
Uncharacterized
Low tissue specificity
Detected in all
KIAA1147
ENSSSCG00000016491
ENSG00000257093
KIAA1147
Tissue enhanced
Detected in all
lens:
37.3
KIAA1217
ENSSSCG00000011075
ENSG00000120549
KIAA1217
Low tissue specificity
Detected in all
KIAA1324L
ENSSSCG00000015394
ENSG00000164659
KIAA1324 like
Tissue enhanced
Detected in many
brain:
27.0
heart:
18.0
KIAA1468
ENSSSCG00000004899
ENSG00000134444
KIAA1468
Low tissue specificity
Detected in all
KIAA1522
ENSSSCG00000037621
ENSG00000162522
KIAA1522
Tissue enhanced
Detected in many
male glands:
57.0
stomach:
72.7
KIAA1549
ENSSSCG00000016513
ENSG00000122778
KIAA1549
Tissue enhanced
Detected in many
cartilage:
35.0
KIAA1551
ENSSSCG00000030616
ENSG00000174718
Uncharacterized
Low tissue specificity
Detected in all
KIAA1841
ENSSSCG00000008386
ENSG00000162929
KIAA1841
Tissue enhanced
Detected in all
brain:
17.0
pineal gland:
17.1
KIAA1958
ENSSSCG00000005469
ENSG00000165185
KIAA1958
Tissue enhanced
Detected in all
retina:
51.1
KIAA2013
ENSSSCG00000003432
ENSG00000116685
KIAA2013
Low tissue specificity
Detected in all
KIAA2026
ENSSSCG00000005205
ENSG00000183354
KIAA2026
Low tissue specificity
Detected in all
KIDINS220
ENSSSCG00000008644
ENSG00000134313
Kinase D interacting substrate 220
Low tissue specificity
Detected in all
KIF11
ENSSSCG00000010471
ENSG00000138160
Kinesin family member 11
Tissue enhanced
Detected in many
lymphoid tissue:
33.9
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